RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 UBL5Q9BZL1 73 aa8.65□□□□□ -1.02
HDAC6-201ENST00000334136 A0A1B0GX51 115 aa8.65□□□□□ -1.03
HDAC6-201ENST00000334136 RNASE3P12724 160 aaKnown RBP8.65□□□□□ -1.03
HDAC6-201ENST00000334136 CNFNQ9BYD5 112 aa8.65□□□□□ -1.03
HDAC6-201ENST00000334136 FHL3Q13643 280 aa8.64□□□□□ -1.03
HDAC6-201ENST00000334136 ODF3L2Q3SX64 289 aa8.64□□□□□ -1.03
HDAC6-201ENST00000334136 IGLV4-3A0A075B6K6 122 aa8.64□□□□□ -1.03
HDAC6-201ENST00000334136 A0A0B4J2C4 111 aa8.64□□□□□ -1.03
HDAC6-201ENST00000334136 DEFB4AO15263 64 aa8.64□□□□□ -1.03
HDAC6-201ENST00000334136 ACYP1P07311 99 aa8.64□□□□□ -1.03
HDAC6-201ENST00000334136 TENM4Q6N022 2769 aa8.63□□□□□ -1.03
HDAC6-201ENST00000334136 SPART-AS1P0CW21 52 aa8.63□□□□□ -1.03
HDAC6-201ENST00000334136 C16orf74Q96GX8 76 aa8.63□□□□□ -1.03
HDAC6-201ENST00000334136 MIAQ16674 131 aa8.63□□□□□ -1.03
HDAC6-201ENST00000334136 DCHS2Q6V1P9 2916 aa8.63□□□□□ -1.03
HDAC6-201ENST00000334136 LECT2O14960 151 aa8.62□□□□□ -1.03
HDAC6-201ENST00000334136 TMEM223A0PJW6 202 aa8.62□□□□□ -1.03
HDAC6-201ENST00000334136 PRM2P04554 102 aa8.62□□□□□ -1.03
HDAC6-201ENST00000334136 ODF3Q96PU9 254 aa8.62□□□□□ -1.03
HDAC6-201ENST00000334136 CCDC179H3BU77 68 aa8.62□□□□□ -1.03
HDAC6-201ENST00000334136 M0QY20 66 aa8.62□□□□□ -1.03
HDAC6-201ENST00000334136 ATP5G1P05496 136 aa8.62□□□□□ -1.03
HDAC6-201ENST00000334136 CYSRT1A8MQ03 144 aa8.62□□□□□ -1.03
HDAC6-201ENST00000334136 MIR7-3HGQ8N6C7 128 aa8.62□□□□□ -1.03
HDAC6-201ENST00000334136 IGHV4-30-4P0DP06 118 aa8.61□□□□□ -1.03
HDAC6-201ENST00000334136 KLK9Q2XQG4 91 aa8.61□□□□□ -1.03
HDAC6-201ENST00000334136 UBE2DNLQ8IWF7 75 aa8.61□□□□□ -1.03
HDAC6-201ENST00000334136 DAZ2Q13117 558 aaKnown RBP8.6□□□□□ -1.03
HDAC6-201ENST00000334136 DAZ4Q86SG3 579 aaKnown RBP8.6□□□□□ -1.03
HDAC6-201ENST00000334136 C14orf132Q9NPU4 83 aa8.6□□□□□ -1.03
HDAC6-201ENST00000334136 DAZ3Q9NR90 486 aaKnown RBP8.6□□□□□ -1.03
HDAC6-201ENST00000334136 IGLV10-54A0A075B6I4 117 aa8.6□□□□□ -1.03
HDAC6-201ENST00000334136 TRBV27A0A0K0K1C4 114 aa8.6□□□□□ -1.03
HDAC6-201ENST00000334136 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
HDAC6-201ENST00000334136 LINC00467Q9BRT7 94 aa8.6□□□□□ -1.03
HDAC6-201ENST00000334136 UBE2D1P51668 147 aa8.59□□□□□ -1.03
HDAC6-201ENST00000334136 NSD1Q96L73 2696 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-201ENST00000334136 ANGP03950 147 aaKnown RBP8.59□□□□□ -1.03
HDAC6-201ENST00000334136 PIK3CD-AS1Q5SR53 167 aa8.59□□□□□ -1.03
HDAC6-201ENST00000334136 SPENQ96T58 3664 aaKnown RBP8.59□□□□□ -1.03
HDAC6-201ENST00000334136 GHRHP01286 108 aa8.58□□□□□ -1.04
HDAC6-201ENST00000334136 TSPEAR-AS2P59090 65 aa8.58□□□□□ -1.04
HDAC6-201ENST00000334136 TMEM263Q8WUH6 116 aaKnown RBP8.58□□□□□ -1.04
HDAC6-201ENST00000334136 FAM110AQ9BQ89 295 aa8.58□□□□□ -1.04
HDAC6-201ENST00000334136 ORMDL1Q9P0S3 153 aa8.58□□□□□ -1.04
HDAC6-201ENST00000334136 LINC00643Q86TS7 51 aa8.58□□□□□ -1.04
HDAC6-201ENST00000334136 KIR2DL5BQ8NHK3 375 aa8.58□□□□□ -1.04
HDAC6-201ENST00000334136 IGIPA6NJ69 53 aa8.57□□□□□ -1.04
HDAC6-201ENST00000334136 IGLV2-18A0A075B6J9 118 aa8.57□□□□□ -1.04
HDAC6-201ENST00000334136 IGHV4-4A0A075B6R2 117 aa8.57□□□□□ -1.04
HDAC6-201ENST00000334136 TRBV30A0A0K0K1B3 111 aa8.57□□□□□ -1.04
HDAC6-201ENST00000334136 SMIM9A6NGZ8 99 aa8.57□□□□□ -1.04
HDAC6-201ENST00000334136 ATOX1O00244 68 aa8.57□□□□□ -1.04
HDAC6-201ENST00000334136 KRTAP10-3P60369 221 aa8.57□□□□□ -1.04
HDAC6-201ENST00000334136 SDIM1Q6ZPB5 146 aa8.57□□□□□ -1.04
HDAC6-201ENST00000334136 RBMY1FQ15415 496 aaKnown RBP8.57□□□□□ -1.04
HDAC6-201ENST00000334136 COX7B2Q8TF08 81 aa8.56□□□□□ -1.04
HDAC6-201ENST00000334136 ASH1LQ9NR48 2969 aaKnown RBP8.56□□□□□ -1.04
HDAC6-201ENST00000334136 COX7A2LO14548 114 aa8.56□□□□□ -1.04
HDAC6-201ENST00000334136 K7EQD1 137 aa8.55□□□□□ -1.04
HDAC6-201ENST00000334136 TSHBP01222 138 aa8.55□□□□□ -1.04
HDAC6-201ENST00000334136 WFDC9Q8NEX5 89 aa8.55□□□□□ -1.04
HDAC6-201ENST00000334136 H0YGX0 51 aa8.55□□□□□ -1.04
HDAC6-201ENST00000334136 LINC00308Q8TCZ7 52 aa8.55□□□□□ -1.04
HDAC6-201ENST00000334136 CRYGDP07320 174 aa8.55□□□□□ -1.04
HDAC6-201ENST00000334136 DSCR8Q96T75 97 aa8.55□□□□□ -1.04
HDAC6-201ENST00000334136 SPANXDQ9BXN6 97 aa8.55□□□□□ -1.04
HDAC6-201ENST00000334136 UBE2D3P61077 147 aa8.54□□□□□ -1.04
HDAC6-201ENST00000334136 UBE2D2P62837 147 aa8.54□□□□□ -1.04
HDAC6-201ENST00000334136 DPH3Q96FX2 82 aa8.54□□□□□ -1.04
HDAC6-201ENST00000334136 IGLV4-69A0A075B6H9 119 aa8.54□□□□□ -1.04
HDAC6-201ENST00000334136 RPL32P62910 135 aaKnown RBP8.54□□□□□ -1.04
HDAC6-201ENST00000334136 SMG1Q96Q15 3661 aaKnown RBP8.54□□□□□ -1.04
HDAC6-201ENST00000334136 SLPIP03973 132 aa8.54□□□□□ -1.04
HDAC6-201ENST00000334136 MIFP14174 115 aa8.54□□□□□ -1.04
HDAC6-201ENST00000334136 FAM222AQ5U5X8 452 aa8.54□□□□□ -1.04
HDAC6-201ENST00000334136 BEAN1Q3B7T3 259 aa8.54□□□□□ -1.04
HDAC6-201ENST00000334136 POM121L12Q8N7R1 296 aa8.54□□□□□ -1.04
HDAC6-201ENST00000334136 C11orf45Q8TAV5 145 aa8.54□□□□□ -1.04
HDAC6-201ENST00000334136 H7C423 109 aa8.53□□□□□ -1.04
HDAC6-201ENST00000334136 J3KT08 172 aa8.53□□□□□ -1.04
HDAC6-201ENST00000334136 RBM3P98179 157 aaKnown RBP8.53□□□□□ -1.04
HDAC6-201ENST00000334136 Q6ZTI0 123 aa8.53□□□□□ -1.04
HDAC6-201ENST00000334136 KLLNB2CW77 178 aa8.53□□□□□ -1.04
HDAC6-201ENST00000334136 MDFIQ99750 246 aa8.53□□□□□ -1.04
HDAC6-201ENST00000334136 CDIP1Q9H305 208 aa8.53□□□□□ -1.04
HDAC6-201ENST00000334136 TRBV6-5A0A0K0K1A5 114 aa8.52□□□□□ -1.04
HDAC6-201ENST00000334136 TRAV23DV6A0A075B6W5 121 aa8.52□□□□□ -1.05
HDAC6-201ENST00000334136 COX8CQ7Z4L0 72 aa8.52□□□□□ -1.05
HDAC6-201ENST00000334136 hADV29S1A0JD25 119 aa8.51□□□□□ -1.05
HDAC6-201ENST00000334136 LST1O00453 97 aa8.51□□□□□ -1.05
HDAC6-201ENST00000334136 GYPEP15421 78 aa8.51□□□□□ -1.05
HDAC6-201ENST00000334136 IGHV4-28A0A0C4DH34 117 aa8.5□□□□□ -1.05
HDAC6-201ENST00000334136 LYRM9A8MSI8 78 aa8.5□□□□□ -1.05
HDAC6-201ENST00000334136 ZNF561-AS1K7EIQ3 104 aa8.5□□□□□ -1.05
HDAC6-201ENST00000334136 UQCRQO14949 82 aa8.5□□□□□ -1.05
HDAC6-201ENST00000334136 SMCPP49901 116 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-201ENST00000334136 SPATA3Q8NHX4 192 aa8.5□□□□□ -1.05
HDAC6-201ENST00000334136 NOTCH1P46531 2555 aa8.5□□□□□ -1.05
HDAC6-201ENST00000334136 IL17DQ8TAD2 202 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms