RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 VCYO14598 125 aa11.27□□□□□ -0.61
SHOX-201ENST00000334060 GAGE6Q13070 117 aa11.27□□□□□ -0.61
SHOX-201ENST00000334060 C3orf84H3BNL1 204 aa11.26□□□□□ -0.61
SHOX-201ENST00000334060 ODF1Q14990 250 aa11.26□□□□□ -0.61
SHOX-201ENST00000334060 NAA38Q9BRA0 125 aaKnown RBP11.26□□□□□ -0.61
SHOX-201ENST00000334060 WFDC2Q14508 124 aa11.25□□□□□ -0.61
SHOX-201ENST00000334060 NHP2Q9NX24 153 aaKnown RBP11.25□□□□□ -0.61
SHOX-201ENST00000334060 DNAH2Q9P225 4427 aa11.25□□□□□ -0.61
SHOX-201ENST00000334060 A6NJY4 79 aa11.25□□□□□ -0.61
SHOX-201ENST00000334060 OPRPNQ99935 248 aaPredicted RBP11.25□□□□□ -0.61
SHOX-201ENST00000334060 KRTAP1-5Q9BYS1 174 aa11.25□□□□□ -0.61
SHOX-201ENST00000334060 PLNP26678 52 aa11.24□□□□□ -0.61
SHOX-201ENST00000334060 RPL32P62910 135 aaKnown RBP11.24□□□□□ -0.61
SHOX-201ENST00000334060 LELP1Q5T871 98 aa11.24□□□□□ -0.61
SHOX-201ENST00000334060 FAM104AQ969W3 186 aa11.24□□□□□ -0.61
SHOX-201ENST00000334060 PRO0461Q9UI25 63 aa11.24□□□□□ -0.61
SHOX-201ENST00000334060 TSPAN13O95857 204 aa11.23□□□□□ -0.61
SHOX-201ENST00000334060 PPP1R17O96001 155 aa11.23□□□□□ -0.61
SHOX-201ENST00000334060 IGHV3-30P01768 117 aa11.23□□□□□ -0.61
SHOX-201ENST00000334060 IGHV3-33P01772 117 aa11.23□□□□□ -0.61
SHOX-201ENST00000334060 IGHV3-30-3P0DP02 117 aa11.23□□□□□ -0.61
SHOX-201ENST00000334060 IGHV3-30-5P0DP03 117 aa11.23□□□□□ -0.61
SHOX-201ENST00000334060 RNASE13Q5GAN3 156 aaKnown RBP11.23□□□□□ -0.61
SHOX-201ENST00000334060 CHCHD5Q9BSY4 110 aa11.23□□□□□ -0.61
SHOX-201ENST00000334060 IGLV4-60A0A075B6I1 120 aa11.23□□□□□ -0.61
SHOX-201ENST00000334060 TMEM262E9PQX1 116 aa11.23□□□□□ -0.61
SHOX-201ENST00000334060 KIR2DL4Q99706 377 aa11.23□□□□□ -0.61
SHOX-201ENST00000334060 RYR2Q92736 4967 aa11.22□□□□□ -0.61
SHOX-201ENST00000334060 APOMO95445 188 aa11.22□□□□□ -0.61
SHOX-201ENST00000334060 LY6G6CO95867 125 aa11.22□□□□□ -0.61
SHOX-201ENST00000334060 PRSS1P07477 247 aa11.22□□□□□ -0.61
SHOX-201ENST00000334060 FOXI1Q12951 378 aa11.22□□□□□ -0.61
SHOX-201ENST00000334060 ETDBQ3ZM63 59 aa11.22□□□□□ -0.61
SHOX-201ENST00000334060 ZC2HC1BQ5TFG8 222 aa11.22□□□□□ -0.61
SHOX-201ENST00000334060 RYR3Q15413 4870 aa11.21□□□□□ -0.61
SHOX-201ENST00000334060 CCL18P55774 89 aa11.21□□□□□ -0.61
SHOX-201ENST00000334060 UBE2DNLQ8IWF7 75 aa11.21□□□□□ -0.61
SHOX-201ENST00000334060 LINC00476Q8WZB0 136 aa11.21□□□□□ -0.62
SHOX-201ENST00000334060 TMEM243Q9BU79 118 aa11.21□□□□□ -0.62
SHOX-201ENST00000334060 LAGE3Q14657 143 aa11.2□□□□□ -0.62
SHOX-201ENST00000334060 CLPSL2Q6UWE3 100 aa11.2□□□□□ -0.62
SHOX-201ENST00000334060 C20orf203Q8NBC4 194 aa11.2□□□□□ -0.62
SHOX-201ENST00000334060 TRAV12-1A0A0B4J245 112 aa11.19□□□□□ -0.62
SHOX-201ENST00000334060 ERG28Q9UKR5 140 aa11.19□□□□□ -0.62
SHOX-201ENST00000334060 M0QXV9 152 aa11.19□□□□□ -0.62
SHOX-201ENST00000334060 SPINK8P0C7L1 97 aa11.19□□□□□ -0.62
SHOX-201ENST00000334060 C2orf66Q6UXQ4 117 aa11.19□□□□□ -0.62
SHOX-201ENST00000334060 SH2D6Q7Z4S9 175 aa11.19□□□□□ -0.62
SHOX-201ENST00000334060 HIST1H4GQ99525 98 aa11.19□□□□□ -0.62
SHOX-201ENST00000334060 Q9H8V8 135 aa11.19□□□□□ -0.62
SHOX-201ENST00000334060 TRBV20-1A0A075B6N2 111 aa11.18□□□□□ -0.62
SHOX-201ENST00000334060 K7EMI3 77 aa11.18□□□□□ -0.62
SHOX-201ENST00000334060 M0R2N4 97 aa11.18□□□□□ -0.62
SHOX-201ENST00000334060 TIRAPP58753 221 aa11.18□□□□□ -0.62
SHOX-201ENST00000334060 PPDPFLQ8WWR9 84 aa11.18□□□□□ -0.62
SHOX-201ENST00000334060 UBE2D4Q9Y2X8 147 aa11.18□□□□□ -0.62
SHOX-201ENST00000334060 A0A087WX48 190 aa11.17□□□□□ -0.62
SHOX-201ENST00000334060 IGKV2D-26A0A0A0MRZ7 120 aa11.17□□□□□ -0.62
SHOX-201ENST00000334060 Q6ZUT4 128 aa11.16□□□□□ -0.62
SHOX-201ENST00000334060 UPK3BQ9BT76 320 aa11.16□□□□□ -0.62
SHOX-201ENST00000334060 LINC01549A6NIU2 74 aa11.16□□□□□ -0.62
SHOX-201ENST00000334060 K7ERJ3 54 aa11.16□□□□□ -0.62
SHOX-201ENST00000334060 IGKV3OR2-268A0A0C4DH90 116 aa11.14□□□□□ -0.63
SHOX-201ENST00000334060 MYMXA0A1B0GTQ4 84 aa11.14□□□□□ -0.63
SHOX-201ENST00000334060 UBE2L6O14933 153 aa11.14□□□□□ -0.63
SHOX-201ENST00000334060 CDIP1Q9H305 208 aa11.14□□□□□ -0.63
SHOX-201ENST00000334060 KLK12Q9UKR0 248 aa11.14□□□□□ -0.63
SHOX-201ENST00000334060 ORMDL2Q53FV1 153 aa11.14□□□□□ -0.63
SHOX-201ENST00000334060 CFAP161Q6P656 301 aa11.14□□□□□ -0.63
SHOX-201ENST00000334060 TEN1Q86WV5 123 aa11.14□□□□□ -0.63
SHOX-201ENST00000334060 DNAH10OSP0CZ25 163 aa11.13□□□□□ -0.63
SHOX-201ENST00000334060 TOMM6Q96B49 74 aa11.13□□□□□ -0.63
SHOX-201ENST00000334060 IGIPA6NJ69 53 aa11.12□□□□□ -0.63
SHOX-201ENST00000334060 LINC00269Q8N2A0 174 aa11.12□□□□□ -0.63
SHOX-201ENST00000334060 F8VRH5 84 aa11.12□□□□□ -0.63
SHOX-201ENST00000334060 ANGP03950 147 aaKnown RBP11.12□□□□□ -0.63
SHOX-201ENST00000334060 LINC01556Q5JQF7 62 aa11.12□□□□□ -0.63
SHOX-201ENST00000334060 DNAH6Q9C0G6 4158 aa11.11□□□□□ -0.63
SHOX-201ENST00000334060 IGLV4-3A0A075B6K6 122 aa11.11□□□□□ -0.63
SHOX-201ENST00000334060 ENHOQ6UWT2 76 aa11.11□□□□□ -0.63
SHOX-201ENST00000334060 ANAPC13Q9BS18 74 aa11.1□□□□□ -0.63
SHOX-201ENST00000334060 CDC42SE2Q9NRR3 84 aa11.1□□□□□ -0.63
SHOX-201ENST00000334060 IGLV10-54A0A075B6I4 117 aa11.1□□□□□ -0.63
SHOX-201ENST00000334060 PAPPA-AS1Q5QFB9 102 aa11.1□□□□□ -0.63
SHOX-201ENST00000334060 Q9HAA7 133 aa11.1□□□□□ -0.63
SHOX-201ENST00000334060 MRPL35Q9NZE8 188 aaKnown RBP11.1□□□□□ -0.63
SHOX-201ENST00000334060 Q6Q795 121 aa11.09□□□□□ -0.63
SHOX-201ENST00000334060 SCGB3A1Q96QR1 104 aa11.09□□□□□ -0.63
SHOX-201ENST00000334060 PRSS29PA6NIE9 313 aa11.08□□□□□ -0.64
SHOX-201ENST00000334060 UBE2D1P51668 147 aa11.08□□□□□ -0.64
SHOX-201ENST00000334060 UBE2WQ96B02 151 aa11.08□□□□□ -0.64
SHOX-201ENST00000334060 SPANXDQ9BXN6 97 aa11.08□□□□□ -0.64
SHOX-201ENST00000334060 FRAS1Q86XX4 4008 aa11.08□□□□□ -0.64
SHOX-201ENST00000334060 NBDYA0A0U1RRE5 68 aa11.08□□□□□ -0.64
SHOX-201ENST00000334060 LCE6AA0A183 80 aa11.08□□□□□ -0.64
SHOX-201ENST00000334060 PGPEP1Q9NXJ5 209 aa11.08□□□□□ -0.64
SHOX-201ENST00000334060 A0A1B0GUV1 79 aa11.07□□□□□ -0.64
SHOX-201ENST00000334060 MAPKAPK5-AS1Q8N8E1 139 aa11.07□□□□□ -0.64
SHOX-201ENST00000334060 BAALCQ8WXS3 180 aa11.07□□□□□ -0.64
SHOX-201ENST00000334060 REG3AQ06141 175 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms