RNA–Protein interactions for RNA: ENST00000333007.5

TNFAIP2-201, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP2, Length 4,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-201ENST00000333007 TIRAPP58753 221 aa13.2□□□□□ -0.3
TNFAIP2-201ENST00000333007 RBMY1FQ15415 496 aaKnown RBP13.2□□□□□ -0.3
TNFAIP2-201ENST00000333007 LOC100131303A0A0U1RQF7 123 aa13.19□□□□□ -0.3
TNFAIP2-201ENST00000333007 SLPIP03973 132 aa13.19□□□□□ -0.3
TNFAIP2-201ENST00000333007 ODF3L2Q3SX64 289 aa13.19□□□□□ -0.3
TNFAIP2-201ENST00000333007 SDIM1Q6ZPB5 146 aa13.19□□□□□ -0.3
TNFAIP2-201ENST00000333007 CHCHD7Q9BUK0 85 aa13.19□□□□□ -0.3
TNFAIP2-201ENST00000333007 KLK9Q2XQG4 91 aa13.18□□□□□ -0.3
TNFAIP2-201ENST00000333007 COX7A2LO14548 114 aa13.18□□□□□ -0.3
TNFAIP2-201ENST00000333007 SMCPP49901 116 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP2-201ENST00000333007 SPANXDQ9BXN6 97 aa13.18□□□□□ -0.3
TNFAIP2-201ENST00000333007 SPANXCQ9NY87 97 aa13.18□□□□□ -0.3
TNFAIP2-201ENST00000333007 AMELXQ99217 191 aa13.17□□□□□ -0.3
TNFAIP2-201ENST00000333007 PRO0461Q9UI25 63 aa13.17□□□□□ -0.3
TNFAIP2-201ENST00000333007 LINC00694P0DN24 101 aa13.16□□□□□ -0.3
TNFAIP2-201ENST00000333007 LINC00242Q5T6M2 205 aa13.16□□□□□ -0.3
TNFAIP2-201ENST00000333007 DMDP11532 3685 aa13.15□□□□□ -0.3
TNFAIP2-201ENST00000333007 USP24Q9UPU5 2620 aa13.15□□□□□ -0.3
TNFAIP2-201ENST00000333007 ACYP1P07311 99 aa13.15□□□□□ -0.3
TNFAIP2-201ENST00000333007 COX6A2Q02221 97 aa13.15□□□□□ -0.3
TNFAIP2-201ENST00000333007 H7C423 109 aa13.15□□□□□ -0.3
TNFAIP2-201ENST00000333007 LST1O00453 97 aa13.14□□□□□ -0.31
TNFAIP2-201ENST00000333007 ASPMQ8IZT6 3477 aa13.14□□□□□ -0.31
TNFAIP2-201ENST00000333007 CDIP1Q9H305 208 aa13.13□□□□□ -0.31
TNFAIP2-201ENST00000333007 ORMDL1Q9P0S3 153 aa13.13□□□□□ -0.31
TNFAIP2-201ENST00000333007 ZZEF1O43149 2961 aa13.12□□□□□ -0.31
TNFAIP2-201ENST00000333007 DEFB135Q30KP9 77 aa13.12□□□□□ -0.31
TNFAIP2-201ENST00000333007 H0YGX0 51 aa13.11□□□□□ -0.31
TNFAIP2-201ENST00000333007 C1orf158Q8N1D5 194 aa13.11□□□□□ -0.31
TNFAIP2-201ENST00000333007 TIMM17BO60830 172 aa13.11□□□□□ -0.31
TNFAIP2-201ENST00000333007 LINC00643Q86TS7 51 aa13.11□□□□□ -0.31
TNFAIP2-201ENST00000333007 BBC3Q96PG8 261 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP2-201ENST00000333007 CFAP46Q8IYW2 2715 aa13.1□□□□□ -0.31
TNFAIP2-201ENST00000333007 TRAV23DV6A0A075B6W5 121 aa13.1□□□□□ -0.31
TNFAIP2-201ENST00000333007 CDC42SE2Q9NRR3 84 aa13.09□□□□□ -0.31
TNFAIP2-201ENST00000333007 TRBV6-8A0A0A6YYG3 113 aa13.08□□□□□ -0.32
TNFAIP2-201ENST00000333007 hADV29S1A0JD25 119 aa13.08□□□□□ -0.32
TNFAIP2-201ENST00000333007 SMIM1B2RUZ4 78 aa13.08□□□□□ -0.32
TNFAIP2-201ENST00000333007 LINC01006Q8NI28 216 aa13.08□□□□□ -0.32
TNFAIP2-201ENST00000333007 NCR3O14931 201 aa13.08□□□□□ -0.32
TNFAIP2-201ENST00000333007 LRRC75A-AS1Q8N1F1 130 aa13.07□□□□□ -0.32
TNFAIP2-201ENST00000333007 DEFB121Q5J5C9 76 aa13.07□□□□□ -0.32
TNFAIP2-201ENST00000333007 DSCR8Q96T75 97 aa13.07□□□□□ -0.32
TNFAIP2-201ENST00000333007 ATOX1O00244 68 aa13.06□□□□□ -0.32
TNFAIP2-201ENST00000333007 APOC4P55056 127 aa13.06□□□□□ -0.32
TNFAIP2-201ENST00000333007 PRO0255Q9UI72 69 aa13.06□□□□□ -0.32
TNFAIP2-201ENST00000333007 TRBV6-4A0A1B0GX49 114 aa13.06□□□□□ -0.32
TNFAIP2-201ENST00000333007 ZNF561-AS1K7EIQ3 104 aa13.05□□□□□ -0.32
TNFAIP2-201ENST00000333007 PRB2P02812 416 aaPredicted RBP13.05□□□□□ -0.32
TNFAIP2-201ENST00000333007 DCHS1Q96JQ0 3298 aa13.04□□□□□ -0.32
TNFAIP2-201ENST00000333007 LINC00269Q8N2A0 174 aa13.04□□□□□ -0.32
TNFAIP2-201ENST00000333007 RBM3P98179 157 aaKnown RBP13.04□□□□□ -0.32
TNFAIP2-201ENST00000333007 PLA2G2AP14555 144 aa13.04□□□□□ -0.32
TNFAIP2-201ENST00000333007 BEAN1Q3B7T3 259 aa13.03□□□□□ -0.32
TNFAIP2-201ENST00000333007 FAM222AQ5U5X8 452 aa13.03□□□□□ -0.32
TNFAIP2-201ENST00000333007 C11orf72Q8NBR9 251 aa13.03□□□□□ -0.32
TNFAIP2-201ENST00000333007 DEFB105AQ8NG35 78 aa13.03□□□□□ -0.32
TNFAIP2-201ENST00000333007 LINC00482Q8N8I6 264 aa13.03□□□□□ -0.32
TNFAIP2-201ENST00000333007 C20orf197Q8N268 126 aa13.01□□□□□ -0.33
TNFAIP2-201ENST00000333007 KLK12Q9UKR0 248 aa13.01□□□□□ -0.33
TNFAIP2-201ENST00000333007 IGHV4-28A0A0C4DH34 117 aa13□□□□□ -0.33
TNFAIP2-201ENST00000333007 IGLV4-60A0A075B6I1 120 aa13□□□□□ -0.33
TNFAIP2-201ENST00000333007 COL12A1Q99715 3063 aa13□□□□□ -0.33
TNFAIP2-201ENST00000333007 ZFHX4Q86UP3 3567 aa13□□□□□ -0.33
TNFAIP2-201ENST00000333007 IBA57-AS1B1ANH7 110 aa12.99□□□□□ -0.33
TNFAIP2-201ENST00000333007 J3KT08 172 aa12.99□□□□□ -0.33
TNFAIP2-201ENST00000333007 GHRHP01286 108 aa12.99□□□□□ -0.33
TNFAIP2-201ENST00000333007 LINC00526Q96FQ7 95 aa12.99□□□□□ -0.33
TNFAIP2-201ENST00000333007 UQCRQO14949 82 aa12.98□□□□□ -0.33
TNFAIP2-201ENST00000333007 CHD6Q8TD26 2715 aa12.98□□□□□ -0.33
TNFAIP2-201ENST00000333007 SPAG11BQ08648 103 aa12.98□□□□□ -0.33
TNFAIP2-201ENST00000333007 WFDC9Q8NEX5 89 aa12.98□□□□□ -0.33
TNFAIP2-201ENST00000333007 KLK5Q9Y337 293 aaPredicted RBP12.98□□□□□ -0.33
TNFAIP2-201ENST00000333007 C9orf66Q5T8R8 295 aa12.98□□□□□ -0.33
TNFAIP2-201ENST00000333007 SMIM11BQ8TCY0 68 aa12.98□□□□□ -0.33
TNFAIP2-201ENST00000333007 CCL18P55774 89 aa12.97□□□□□ -0.33
TNFAIP2-201ENST00000333007 A0A087WVE0 104 aa12.96□□□□□ -0.33
TNFAIP2-201ENST00000333007 SCXQ7RTU7 201 aa12.96□□□□□ -0.33
TNFAIP2-201ENST00000333007 SPART-AS1P0CW21 52 aa12.96□□□□□ -0.33
TNFAIP2-201ENST00000333007 LINC00959A0A1B0GUT2 108 aa12.96□□□□□ -0.34
TNFAIP2-201ENST00000333007 NTM-AS1Q6ZSK4 140 aa12.96□□□□□ -0.34
TNFAIP2-201ENST00000333007 HELZ2Q9BYK8 2649 aaKnown RBP12.95□□□□□ -0.34
TNFAIP2-201ENST00000333007 CHCHD10Q8WYQ3 142 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP2-201ENST00000333007 C3orf22Q8N5N4 141 aa12.95□□□□□ -0.34
TNFAIP2-201ENST00000333007 FLNAP21333 2647 aaKnown RBP12.95□□□□□ -0.34
TNFAIP2-201ENST00000333007 REG3AQ06141 175 aa12.95□□□□□ -0.34
TNFAIP2-201ENST00000333007 MRAPQ8TCY5 172 aa12.95□□□□□ -0.34
TNFAIP2-201ENST00000333007 RPL18AQ02543 176 aaKnown RBP12.94□□□□□ -0.34
TNFAIP2-201ENST00000333007 INAFM1C9JVW0 142 aa12.94□□□□□ -0.34
TNFAIP2-201ENST00000333007 ENHOQ6UWT2 76 aa12.94□□□□□ -0.34
TNFAIP2-201ENST00000333007 SMR3AQ99954 134 aa12.94□□□□□ -0.34
TNFAIP2-201ENST00000333007 Q8N2B8 174 aa12.93□□□□□ -0.34
TNFAIP2-201ENST00000333007 ATRQ13535 2644 aa12.93□□□□□ -0.34
TNFAIP2-201ENST00000333007 CSDC2Q9Y534 153 aaKnown RBP12.93□□□□□ -0.34
TNFAIP2-201ENST00000333007 LAMA5O15230 3695 aa12.92□□□□□ -0.34
TNFAIP2-201ENST00000333007 ITPR3Q14573 2671 aa12.92□□□□□ -0.34
TNFAIP2-201ENST00000333007 C1orf43Q9BWL3 253 aa12.91□□□□□ -0.34
TNFAIP2-201ENST00000333007 CAMK2N2Q96S95 79 aa12.91□□□□□ -0.34
TNFAIP2-201ENST00000333007 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP2-201ENST00000333007 CXCL5P42830 114 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms