RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 ZFAND6Q6FIF0 208 aa11.72□□□□□ -0.53
DDX41-201ENST00000330503 NAA38Q9BRA0 125 aaKnown RBP11.72□□□□□ -0.53
DDX41-201ENST00000330503 A0A1B0GWB2 263 aa11.71□□□□□ -0.53
DDX41-201ENST00000330503 SMIM1B2RUZ4 78 aa11.71□□□□□ -0.53
DDX41-201ENST00000330503 VAMP3Q15836 100 aa11.71□□□□□ -0.53
DDX41-201ENST00000330503 IGKV3OR2-268A0A0C4DH90 116 aa11.71□□□□□ -0.54
DDX41-201ENST00000330503 MRPL23Q16540 153 aaKnown RBP11.71□□□□□ -0.54
DDX41-201ENST00000330503 NOTCH1P46531 2555 aa11.7□□□□□ -0.54
DDX41-201ENST00000330503 H3BUT2 72 aa11.7□□□□□ -0.54
DDX41-201ENST00000330503 LITAFQ99732 161 aa11.7□□□□□ -0.54
DDX41-201ENST00000330503 C11orf68Q9H3H3 251 aaKnown RBP11.7□□□□□ -0.54
DDX41-201ENST00000330503 CCL25O15444 150 aa11.69□□□□□ -0.54
DDX41-201ENST00000330503 UBE2V1Q13404 147 aa11.69□□□□□ -0.54
DDX41-201ENST00000330503 MDFIQ99750 246 aa11.68□□□□□ -0.54
DDX41-201ENST00000330503 ICOSQ9Y6W8 199 aa11.68□□□□□ -0.54
DDX41-201ENST00000330503 TENM3Q9P273 2699 aa11.68□□□□□ -0.54
DDX41-201ENST00000330503 LINC00959A0A1B0GUT2 108 aa11.68□□□□□ -0.54
DDX41-201ENST00000330503 A0A0J9YWU9 116 aa11.67□□□□□ -0.54
DDX41-201ENST00000330503 NDUFA1O15239 70 aa11.67□□□□□ -0.54
DDX41-201ENST00000330503 ADAMTSL4-AS1Q5T5F5 129 aa11.67□□□□□ -0.54
DDX41-201ENST00000330503 IGHV3OR16-9A0A0B4J2B5 98 aa11.66□□□□□ -0.54
DDX41-201ENST00000330503 K7EIL1 84 aa11.66□□□□□ -0.54
DDX41-201ENST00000330503 Q6ZTC4 211 aa11.66□□□□□ -0.54
DDX41-201ENST00000330503 Q8N3U1 123 aa11.66□□□□□ -0.54
DDX41-201ENST00000330503 IGLL5B9A064 214 aa11.66□□□□□ -0.54
DDX41-201ENST00000330503 SH2D6Q7Z4S9 175 aa11.66□□□□□ -0.54
DDX41-201ENST00000330503 MUSTN1Q8IVN3 82 aa11.66□□□□□ -0.54
DDX41-201ENST00000330503 TMEM238C9JI98 176 aa11.65□□□□□ -0.54
DDX41-201ENST00000330503 NBEAL1Q6ZS30 2694 aa11.65□□□□□ -0.54
DDX41-201ENST00000330503 TMEM238LA0A1B0GVL6 79 aa11.65□□□□□ -0.55
DDX41-201ENST00000330503 A0A1W2PPM0 123 aa11.65□□□□□ -0.55
DDX41-201ENST00000330503 A6NJY4 79 aa11.65□□□□□ -0.55
DDX41-201ENST00000330503 LELP1Q5T871 98 aa11.64□□□□□ -0.55
DDX41-201ENST00000330503 Q9H8V8 135 aa11.63□□□□□ -0.55
DDX41-201ENST00000330503 CFC1BP0CG36 223 aa11.63□□□□□ -0.55
DDX41-201ENST00000330503 CFC1P0CG37 223 aa11.63□□□□□ -0.55
DDX41-201ENST00000330503 NANOS2P60321 138 aaKnown RBP11.63□□□□□ -0.55
DDX41-201ENST00000330503 KPRPQ5T749 579 aaPredicted RBP11.63□□□□□ -0.55
DDX41-201ENST00000330503 LYPD5Q6UWN5 251 aa11.63□□□□□ -0.55
DDX41-201ENST00000330503 ZNF625Q96I27 306 aaPredicted RBP11.63□□□□□ -0.55
DDX41-201ENST00000330503 SPANXDQ9BXN6 97 aa11.63□□□□□ -0.55
DDX41-201ENST00000330503 SPANXCQ9NY87 97 aa11.63□□□□□ -0.55
DDX41-201ENST00000330503 H3BNG1 76 aa11.62□□□□□ -0.55
DDX41-201ENST00000330503 TIMM17BO60830 172 aa11.62□□□□□ -0.55
DDX41-201ENST00000330503 CLPSL2Q6UWE3 100 aa11.62□□□□□ -0.55
DDX41-201ENST00000330503 A0A087WZ39 114 aa11.62□□□□□ -0.55
DDX41-201ENST00000330503 EIF4EBP3O60516 100 aaPredicted RBP11.62□□□□□ -0.55
DDX41-201ENST00000330503 C5orf38Q86SI9 138 aa11.62□□□□□ -0.55
DDX41-201ENST00000330503 LINC00269Q8N2A0 174 aa11.62□□□□□ -0.55
DDX41-201ENST00000330503 A4D1N5 150 aa11.61□□□□□ -0.55
DDX41-201ENST00000330503 APOMO95445 188 aa11.61□□□□□ -0.55
DDX41-201ENST00000330503 SS18Q15532 418 aa11.61□□□□□ -0.55
DDX41-201ENST00000330503 TM2D3Q9BRN9 247 aa11.6□□□□□ -0.55
DDX41-201ENST00000330503 MIAQ16674 131 aa11.6□□□□□ -0.55
DDX41-201ENST00000330503 DEFB121Q5J5C9 76 aa11.6□□□□□ -0.55
DDX41-201ENST00000330503 C11orf45Q8TAV5 145 aa11.6□□□□□ -0.55
DDX41-201ENST00000330503 COX7B2Q8TF08 81 aa11.6□□□□□ -0.55
DDX41-201ENST00000330503 GAGE10A6NGK3 116 aa11.59□□□□□ -0.55
DDX41-201ENST00000330503 PRSS2P07478 247 aa11.59□□□□□ -0.55
DDX41-201ENST00000330503 FABP2P12104 132 aa11.59□□□□□ -0.55
DDX41-201ENST00000330503 XCL1P47992 114 aa11.59□□□□□ -0.55
DDX41-201ENST00000330503 K7EP34 96 aa11.59□□□□□ -0.55
DDX41-201ENST00000330503 ANGP03950 147 aaKnown RBP11.59□□□□□ -0.55
DDX41-201ENST00000330503 RPL24P83731 157 aaKnown RBP11.59□□□□□ -0.55
DDX41-201ENST00000330503 SPATA25Q9BR10 227 aa11.59□□□□□ -0.55
DDX41-201ENST00000330503 MRAPQ8TCY5 172 aa11.58□□□□□ -0.56
DDX41-201ENST00000330503 PGPEP1Q9NXJ5 209 aa11.58□□□□□ -0.56
DDX41-201ENST00000330503 REG3AQ06141 175 aa11.57□□□□□ -0.56
DDX41-201ENST00000330503 DAND5Q8N907 189 aa11.57□□□□□ -0.56
DDX41-201ENST00000330503 HUWE1Q7Z6Z7 4374 aaKnown RBP11.57□□□□□ -0.56
DDX41-201ENST00000330503 SPCS1Q9Y6A9 102 aa11.57□□□□□ -0.56
DDX41-201ENST00000330503 MGAM2Q2M2H8 2515 aa11.56□□□□□ -0.56
DDX41-201ENST00000330503 DEFB131BA0A096LNP1 70 aa11.56□□□□□ -0.56
DDX41-201ENST00000330503 TOMM7Q9P0U1 55 aa11.56□□□□□ -0.56
DDX41-201ENST00000330503 TSPAN13O95857 204 aa11.56□□□□□ -0.56
DDX41-201ENST00000330503 NPC2P61916 151 aa11.56□□□□□ -0.56
DDX41-201ENST00000330503 HERV-K104P63124 156 aa11.56□□□□□ -0.56
DDX41-201ENST00000330503 GTF2H5Q6ZYL4 71 aa11.56□□□□□ -0.56
DDX41-201ENST00000330503 CIRBPQ14011 172 aaKnown RBP11.55□□□□□ -0.56
DDX41-201ENST00000330503 CHCHD10Q8WYQ3 142 aaPredicted RBP11.55□□□□□ -0.56
DDX41-201ENST00000330503 PRO1854Q9UHT4 67 aa11.54□□□□□ -0.56
DDX41-201ENST00000330503 A0A0U1RRA0 63 aa11.54□□□□□ -0.56
DDX41-201ENST00000330503 IFITM1P13164 125 aa11.54□□□□□ -0.56
DDX41-201ENST00000330503 CD164L2Q6UWJ8 174 aa11.54□□□□□ -0.56
DDX41-201ENST00000330503 LINC01561Q8N1V8 128 aa11.54□□□□□ -0.56
DDX41-201ENST00000330503 IGLV10-54A0A075B6I4 117 aa11.53□□□□□ -0.56
DDX41-201ENST00000330503 A0A0B4J2C4 111 aa11.53□□□□□ -0.56
DDX41-201ENST00000330503 ESRGQ1W209 222 aa11.53□□□□□ -0.56
DDX41-201ENST00000330503 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.53□□□□□ -0.56
DDX41-201ENST00000330503 PRR34Q9NV39 138 aa11.53□□□□□ -0.56
DDX41-201ENST00000330503 MEIG1Q5JSS6 88 aa11.52□□□□□ -0.57
DDX41-201ENST00000330503 LINC00308Q8TCZ7 52 aa11.52□□□□□ -0.57
DDX41-201ENST00000330503 KLK12Q9UKR0 248 aa11.52□□□□□ -0.57
DDX41-201ENST00000330503 IGHV3-33P01772 117 aa11.51□□□□□ -0.57
DDX41-201ENST00000330503 ENHOQ6UWT2 76 aa11.51□□□□□ -0.57
DDX41-201ENST00000330503 SOSTDC1Q6X4U4 206 aa11.51□□□□□ -0.57
DDX41-201ENST00000330503 WFDC10BQ8IUB3 73 aa11.51□□□□□ -0.57
DDX41-201ENST00000330503 FOXI1Q12951 378 aa11.5□□□□□ -0.57
DDX41-201ENST00000330503 COX7A2LO14548 114 aa11.49□□□□□ -0.57
DDX41-201ENST00000330503 C6orf226Q5I0X4 101 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms