RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 TTC32Q5I0X7 151 aa11.55□□□□□ -0.56
SYNM-201ENST00000328642 SND1-IT1Q9HBX3 110 aa11.55□□□□□ -0.56
SYNM-201ENST00000328642 IGHV4-28A0A0C4DH34 117 aa11.55□□□□□ -0.56
SYNM-201ENST00000328642 TMEM223A0PJW6 202 aa11.54□□□□□ -0.56
SYNM-201ENST00000328642 COX7B2Q8TF08 81 aa11.54□□□□□ -0.56
SYNM-201ENST00000328642 CARD19Q96LW7 228 aa11.54□□□□□ -0.56
SYNM-201ENST00000328642 ZMAT4Q9H898 229 aa11.54□□□□□ -0.56
SYNM-201ENST00000328642 BRI3O95415 125 aa11.54□□□□□ -0.56
SYNM-201ENST00000328642 SPENQ96T58 3664 aaKnown RBP11.54□□□□□ -0.56
SYNM-201ENST00000328642 TRAV8-4A0A0B4J246 113 aa11.53□□□□□ -0.56
SYNM-201ENST00000328642 GAGE2EQ4V326 116 aa11.53□□□□□ -0.56
SYNM-201ENST00000328642 GAGE2DQ9UEU5 116 aa11.53□□□□□ -0.56
SYNM-201ENST00000328642 UBE2D4Q9Y2X8 147 aa11.53□□□□□ -0.56
SYNM-201ENST00000328642 F8W1H4 67 aa11.52□□□□□ -0.56
SYNM-201ENST00000328642 PSCAO43653 123 aa11.52□□□□□ -0.56
SYNM-201ENST00000328642 HIGD2BQ4VC39 106 aa11.52□□□□□ -0.56
SYNM-201ENST00000328642 HIVEP1P15822 2718 aa11.52□□□□□ -0.57
SYNM-201ENST00000328642 IGLV4-69A0A075B6H9 119 aa11.52□□□□□ -0.57
SYNM-201ENST00000328642 TRBV6-8A0A0A6YYG3 113 aa11.52□□□□□ -0.57
SYNM-201ENST00000328642 INSL3P51460 131 aa11.52□□□□□ -0.57
SYNM-201ENST00000328642 GAGE2AQ6NT46 116 aa11.51□□□□□ -0.57
SYNM-201ENST00000328642 TM2D2Q9BX73 214 aa11.51□□□□□ -0.57
SYNM-201ENST00000328642 ICOSQ9Y6W8 199 aa11.51□□□□□ -0.57
SYNM-201ENST00000328642 TRBV20-1A0A075B6N2 111 aa11.51□□□□□ -0.57
SYNM-201ENST00000328642 COX7A2LO14548 114 aa11.51□□□□□ -0.57
SYNM-201ENST00000328642 POM121L12Q8N7R1 296 aa11.51□□□□□ -0.57
SYNM-201ENST00000328642 TINCRA0A1B0GVN0 87 aa11.51□□□□□ -0.57
SYNM-201ENST00000328642 TCL1BO95988 128 aa11.51□□□□□ -0.57
SYNM-201ENST00000328642 IGHV4-30-4P0DP06 118 aa11.51□□□□□ -0.57
SYNM-201ENST00000328642 COX6A2Q02221 97 aa11.51□□□□□ -0.57
SYNM-201ENST00000328642 LAMTOR3Q9UHA4 124 aa11.5□□□□□ -0.57
SYNM-201ENST00000328642 SCGB1A1P11684 91 aa11.5□□□□□ -0.57
SYNM-201ENST00000328642 IGLV4-60A0A075B6I1 120 aa11.49□□□□□ -0.57
SYNM-201ENST00000328642 FSHBP01225 129 aa11.49□□□□□ -0.57
SYNM-201ENST00000328642 FAM19A4Q96LR4 140 aa11.48□□□□□ -0.57
SYNM-201ENST00000328642 PRSS47A8MTI9 375 aa11.48□□□□□ -0.57
SYNM-201ENST00000328642 CHCHD7Q9BUK0 85 aa11.47□□□□□ -0.57
SYNM-201ENST00000328642 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
SYNM-201ENST00000328642 GAGE12HA6NDE8 117 aa11.46□□□□□ -0.57
SYNM-201ENST00000328642 NCR3O14931 201 aa11.46□□□□□ -0.57
SYNM-201ENST00000328642 REG3AQ06141 175 aa11.46□□□□□ -0.58
SYNM-201ENST00000328642 LINC00242Q5T6M2 205 aa11.46□□□□□ -0.58
SYNM-201ENST00000328642 C1orf43Q9BWL3 253 aa11.46□□□□□ -0.58
SYNM-201ENST00000328642 TRBV6-4A0A1B0GX49 114 aa11.45□□□□□ -0.58
SYNM-201ENST00000328642 Q8N2B8 174 aa11.45□□□□□ -0.58
SYNM-201ENST00000328642 C11orf72Q8NBR9 251 aa11.45□□□□□ -0.58
SYNM-201ENST00000328642 PPDPFLQ8WWR9 84 aa11.45□□□□□ -0.58
SYNM-201ENST00000328642 SPAG11BQ08648 103 aa11.45□□□□□ -0.58
SYNM-201ENST00000328642 XAGE1AQ9HD64 81 aa11.45□□□□□ -0.58
SYNM-201ENST00000328642 UBE2D3P61077 147 aa11.45□□□□□ -0.58
SYNM-201ENST00000328642 UBE2D2P62837 147 aa11.45□□□□□ -0.58
SYNM-201ENST00000328642 CAMK2N2Q96S95 79 aa11.45□□□□□ -0.58
SYNM-201ENST00000328642 LINC01620Q4KN68 170 aa11.44□□□□□ -0.58
SYNM-201ENST00000328642 ANKRD29Q8N6D5 301 aa11.44□□□□□ -0.58
SYNM-201ENST00000328642 LECT2O14960 151 aa11.44□□□□□ -0.58
SYNM-201ENST00000328642 CHCHD10Q8WYQ3 142 aaPredicted RBP11.44□□□□□ -0.58
SYNM-201ENST00000328642 MIAQ16674 131 aa11.43□□□□□ -0.58
SYNM-201ENST00000328642 KRTAP1-3Q8IUG1 177 aa11.43□□□□□ -0.58
SYNM-201ENST00000328642 UBE2D1P51668 147 aa11.43□□□□□ -0.58
SYNM-201ENST00000328642 ADAMTSL4-AS1Q5T5F5 129 aa11.43□□□□□ -0.58
SYNM-201ENST00000328642 GAGE2BQ13066 116 aa11.43□□□□□ -0.58
SYNM-201ENST00000328642 ANAPC13Q9BS18 74 aa11.43□□□□□ -0.58
SYNM-201ENST00000328642 CDC42SE2Q9NRR3 84 aa11.43□□□□□ -0.58
SYNM-201ENST00000328642 BAALC-AS2P0C853 105 aa11.42□□□□□ -0.58
SYNM-201ENST00000328642 C11orf45Q8TAV5 145 aa11.42□□□□□ -0.58
SYNM-201ENST00000328642 PYGO1Q9Y3Y4 419 aa11.42□□□□□ -0.58
SYNM-201ENST00000328642 CR1P17927 2039 aa11.42□□□□□ -0.58
SYNM-201ENST00000328642 RPL32P62910 135 aaKnown RBP11.41□□□□□ -0.58
SYNM-201ENST00000328642 DEFB131BA0A096LNP1 70 aa11.41□□□□□ -0.58
SYNM-201ENST00000328642 NANOS2P60321 138 aaKnown RBP11.41□□□□□ -0.58
SYNM-201ENST00000328642 ZNF575Q86XF7 245 aa11.41□□□□□ -0.58
SYNM-201ENST00000328642 FHL2Q14192 279 aa11.41□□□□□ -0.58
SYNM-201ENST00000328642 LINC00308Q8TCZ7 52 aa11.41□□□□□ -0.58
SYNM-201ENST00000328642 TRAV13-2A0A0B4J235 113 aa11.4□□□□□ -0.58
SYNM-201ENST00000328642 TRIAP1O43715 76 aa11.4□□□□□ -0.58
SYNM-201ENST00000328642 C9orf116Q5BN46 136 aaPredicted RBP11.4□□□□□ -0.58
SYNM-201ENST00000328642 HIST1H4AP62805 103 aaKnown RBP11.4□□□□□ -0.58
SYNM-201ENST00000328642 HERV-K104P63124 156 aa11.4□□□□□ -0.58
SYNM-201ENST00000328642 SLPIP03973 132 aa11.4□□□□□ -0.59
SYNM-201ENST00000328642 MRPS36P82909 103 aaKnown RBP11.4□□□□□ -0.59
SYNM-201ENST00000328642 NTM-AS1Q6ZSK4 140 aa11.4□□□□□ -0.59
SYNM-201ENST00000328642 IFITM1P13164 125 aa11.39□□□□□ -0.59
SYNM-201ENST00000328642 DEFB105AQ8NG35 78 aa11.39□□□□□ -0.59
SYNM-201ENST00000328642 C16orf95Q9H693 158 aa11.39□□□□□ -0.59
SYNM-201ENST00000328642 RPL18AQ02543 176 aaKnown RBP11.38□□□□□ -0.59
SYNM-201ENST00000328642 Q8N3U1 123 aa11.38□□□□□ -0.59
SYNM-201ENST00000328642 TEX49A0A1B0GTD5 131 aa11.38□□□□□ -0.59
SYNM-201ENST00000328642 LYRM9A8MSI8 78 aa11.38□□□□□ -0.59
SYNM-201ENST00000328642 PRR3P79522 188 aaKnown RBP11.38□□□□□ -0.59
SYNM-201ENST00000328642 FHL3Q13643 280 aa11.38□□□□□ -0.59
SYNM-201ENST00000328642 LINC00959A0A1B0GUT2 108 aa11.37□□□□□ -0.59
SYNM-201ENST00000328642 C15orf53Q8NAA6 179 aa11.37□□□□□ -0.59
SYNM-201ENST00000328642 KPRPQ5T749 579 aaPredicted RBP11.37□□□□□ -0.59
SYNM-201ENST00000328642 KLK9Q2XQG4 91 aa11.37□□□□□ -0.59
SYNM-201ENST00000328642 ZFAND6Q6FIF0 208 aa11.36□□□□□ -0.59
SYNM-201ENST00000328642 A0A0J9YWU9 116 aa11.36□□□□□ -0.59
SYNM-201ENST00000328642 BEAN1Q3B7T3 259 aa11.36□□□□□ -0.59
SYNM-201ENST00000328642 TEN1Q86WV5 123 aa11.36□□□□□ -0.59
SYNM-201ENST00000328642 CELA1Q9UNI1 258 aa11.36□□□□□ -0.59
SYNM-201ENST00000328642 CSMD2Q7Z408 3487 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms