RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 HIVEP2P31629 2446 aa9.18□□□□□ -0.94
DNMT3A-202ENST00000321117 SMIM11BQ8TCY0 68 aa9.18□□□□□ -0.94
DNMT3A-202ENST00000321117 NCR3O14931 201 aa9.18□□□□□ -0.94
DNMT3A-202ENST00000321117 DOPEY1Q5JWR5 2465 aa9.18□□□□□ -0.94
DNMT3A-202ENST00000321117 TRBV6-8A0A0A6YYG3 113 aa9.17□□□□□ -0.94
DNMT3A-202ENST00000321117 TRBV6-4A0A1B0GX49 114 aa9.17□□□□□ -0.94
DNMT3A-202ENST00000321117 ODF3L2Q3SX64 289 aa9.17□□□□□ -0.94
DNMT3A-202ENST00000321117 LOC100131303A0A0U1RQF7 123 aa9.17□□□□□ -0.94
DNMT3A-202ENST00000321117 ZNF292O60281 2723 aa9.17□□□□□ -0.94
DNMT3A-202ENST00000321117 LITAFQ99732 161 aa9.16□□□□□ -0.94
DNMT3A-202ENST00000321117 TMEM256-PLSCR3K7ERE1 68 aa9.16□□□□□ -0.94
DNMT3A-202ENST00000321117 C1orf43Q9BWL3 253 aa9.16□□□□□ -0.94
DNMT3A-202ENST00000321117 CSDC2Q9Y534 153 aaKnown RBP9.16□□□□□ -0.94
DNMT3A-202ENST00000321117 CCL18P55774 89 aa9.16□□□□□ -0.94
DNMT3A-202ENST00000321117 C5orf47Q569G3 176 aa9.16□□□□□ -0.94
DNMT3A-202ENST00000321117 BOD1L1Q8NFC6 3051 aa9.16□□□□□ -0.94
DNMT3A-202ENST00000321117 RPL28P46779 137 aaKnown RBP9.15□□□□□ -0.94
DNMT3A-202ENST00000321117 hADV29S1A0JD25 119 aa9.15□□□□□ -0.94
DNMT3A-202ENST00000321117 CXCL5P42830 114 aa9.15□□□□□ -0.94
DNMT3A-202ENST00000321117 USP34Q70CQ2 3546 aa9.15□□□□□ -0.95
DNMT3A-202ENST00000321117 JMJD1CQ15652 2540 aa9.15□□□□□ -0.95
DNMT3A-202ENST00000321117 ANKRD17O75179 2603 aaKnown RBP9.15□□□□□ -0.95
DNMT3A-202ENST00000321117 IGLV5-39A0A0G2JS06 123 aa9.14□□□□□ -0.95
DNMT3A-202ENST00000321117 TRBV7-7A0A0K0K1E9 115 aa9.14□□□□□ -0.95
DNMT3A-202ENST00000321117 DNAJC9-AS1A6NH13 148 aa9.14□□□□□ -0.95
DNMT3A-202ENST00000321117 PRB1P04280 392 aa9.14□□□□□ -0.95
DNMT3A-202ENST00000321117 COX7CP15954 63 aa9.14□□□□□ -0.95
DNMT3A-202ENST00000321117 C1orf158Q8N1D5 194 aa9.14□□□□□ -0.95
DNMT3A-202ENST00000321117 SHISA2Q6UWI4 295 aa9.14□□□□□ -0.95
DNMT3A-202ENST00000321117 C11orf72Q8NBR9 251 aa9.14□□□□□ -0.95
DNMT3A-202ENST00000321117 F8WEM9 126 aa9.13□□□□□ -0.95
DNMT3A-202ENST00000321117 Q8N2B8 174 aa9.13□□□□□ -0.95
DNMT3A-202ENST00000321117 ESM1Q9NQ30 184 aa9.13□□□□□ -0.95
DNMT3A-202ENST00000321117 COL6A3P12111 3177 aa9.13□□□□□ -0.95
DNMT3A-202ENST00000321117 PRO0255Q9UI72 69 aa9.13□□□□□ -0.95
DNMT3A-202ENST00000321117 PKD1L2Q7Z442 2459 aa9.13□□□□□ -0.95
DNMT3A-202ENST00000321117 ZNF561-AS1K7EIQ3 104 aa9.13□□□□□ -0.95
DNMT3A-202ENST00000321117 RPL18AQ02543 176 aaKnown RBP9.13□□□□□ -0.95
DNMT3A-202ENST00000321117 IGLV5-45A0A087WSX0 123 aa9.12□□□□□ -0.95
DNMT3A-202ENST00000321117 WFDC10AQ9H1F0 79 aa9.12□□□□□ -0.95
DNMT3A-202ENST00000321117 MTORP42345 2549 aa9.12□□□□□ -0.95
DNMT3A-202ENST00000321117 TRAV23DV6A0A075B6W5 121 aa9.12□□□□□ -0.95
DNMT3A-202ENST00000321117 RBM3P98179 157 aaKnown RBP9.11□□□□□ -0.95
DNMT3A-202ENST00000321117 FAM110AQ9BQ89 295 aa9.11□□□□□ -0.95
DNMT3A-202ENST00000321117 ADGRG4Q8IZF6 3080 aa9.11□□□□□ -0.95
DNMT3A-202ENST00000321117 AKAP13Q12802 2813 aa9.11□□□□□ -0.95
DNMT3A-202ENST00000321117 LRRC75A-AS1Q8N1F1 130 aa9.11□□□□□ -0.95
DNMT3A-202ENST00000321117 USP17L23D6RBM5 183 aa9.1□□□□□ -0.95
DNMT3A-202ENST00000321117 ZFYVE26Q68DK2 2539 aa9.1□□□□□ -0.95
DNMT3A-202ENST00000321117 LINC00959A0A1B0GUT2 108 aa9.1□□□□□ -0.95
DNMT3A-202ENST00000321117 SOSTDC1Q6X4U4 206 aa9.1□□□□□ -0.95
DNMT3A-202ENST00000321117 LINC00269Q8N2A0 174 aa9.1□□□□□ -0.95
DNMT3A-202ENST00000321117 SPAG11BQ08648 103 aa9.1□□□□□ -0.95
DNMT3A-202ENST00000321117 SERP2Q8N6R1 65 aa9.1□□□□□ -0.95
DNMT3A-202ENST00000321117 A0A087WYN8 130 aa9.09□□□□□ -0.95
DNMT3A-202ENST00000321117 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.95
DNMT3A-202ENST00000321117 LINC00337Q8N6G1 96 aa9.09□□□□□ -0.95
DNMT3A-202ENST00000321117 LINC00526Q96FQ7 95 aa9.09□□□□□ -0.95
DNMT3A-202ENST00000321117 APOC4P55056 127 aa9.09□□□□□ -0.95
DNMT3A-202ENST00000321117 IGLV4-60A0A075B6I1 120 aa9.08□□□□□ -0.96
DNMT3A-202ENST00000321117 Q6JHZ5 121 aa9.08□□□□□ -0.96
DNMT3A-202ENST00000321117 NHLRC4P0CG21 123 aaPredicted RBP9.08□□□□□ -0.96
DNMT3A-202ENST00000321117 DEFB4AO15263 64 aa9.08□□□□□ -0.96
DNMT3A-202ENST00000321117 NTM-AS1Q6ZSK4 140 aa9.08□□□□□ -0.96
DNMT3A-202ENST00000321117 C6orf99Q4VX62 202 aa9.08□□□□□ -0.96
DNMT3A-202ENST00000321117 ATP5EP2Q5VTU8 51 aa9.07□□□□□ -0.96
DNMT3A-202ENST00000321117 A0A087WZ39 114 aa9.07□□□□□ -0.96
DNMT3A-202ENST00000321117 CDK2AP2O75956 126 aa9.07□□□□□ -0.96
DNMT3A-202ENST00000321117 CHCHD10Q8WYQ3 142 aaPredicted RBP9.07□□□□□ -0.96
DNMT3A-202ENST00000321117 ENHOQ6UWT2 76 aa9.07□□□□□ -0.96
DNMT3A-202ENST00000321117 TMEM258P61165 79 aa9.06□□□□□ -0.96
DNMT3A-202ENST00000321117 UPK3BQ9BT76 320 aa9.06□□□□□ -0.96
DNMT3A-202ENST00000321117 C20orf197Q8N268 126 aa9.06□□□□□ -0.96
DNMT3A-202ENST00000321117 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.06□□□□□ -0.96
DNMT3A-202ENST00000321117 REG3AQ06141 175 aa9.05□□□□□ -0.96
DNMT3A-202ENST00000321117 A0A087WVE0 104 aa9.05□□□□□ -0.96
DNMT3A-202ENST00000321117 DEFB135Q30KP9 77 aa9.05□□□□□ -0.96
DNMT3A-202ENST00000321117 FAM218AQ96MZ4 157 aa9.05□□□□□ -0.96
DNMT3A-202ENST00000321117 MRAPQ8TCY5 172 aa9.05□□□□□ -0.96
DNMT3A-202ENST00000321117 DEFB121Q5J5C9 76 aa9.05□□□□□ -0.96
DNMT3A-202ENST00000321117 KLK12Q9UKR0 248 aa9.05□□□□□ -0.96
DNMT3A-202ENST00000321117 Q8IZM0 81 aa9.04□□□□□ -0.96
DNMT3A-202ENST00000321117 DIRC1Q969H9 104 aa9.04□□□□□ -0.96
DNMT3A-202ENST00000321117 ZNF462Q96JM2 2506 aa9.04□□□□□ -0.96
DNMT3A-202ENST00000321117 KLK5Q9Y337 293 aaPredicted RBP9.03□□□□□ -0.96
DNMT3A-202ENST00000321117 KALRNO60229 2985 aa9.03□□□□□ -0.96
DNMT3A-202ENST00000321117 BBC3Q96PG8 261 aaPredicted RBP9.03□□□□□ -0.96
DNMT3A-202ENST00000321117 LINC00846Q9NV44 126 aa9.03□□□□□ -0.96
DNMT3A-202ENST00000321117 TACC2O95359 2948 aa9.03□□□□□ -0.96
DNMT3A-202ENST00000321117 CAMK2N2Q96S95 79 aa9.02□□□□□ -0.96
DNMT3A-202ENST00000321117 MAP1AP78559 2803 aaPredicted RBP9.02□□□□□ -0.96
DNMT3A-202ENST00000321117 H3BQ85 93 aa9.02□□□□□ -0.97
DNMT3A-202ENST00000321117 PDE6GP18545 87 aa9.02□□□□□ -0.97
DNMT3A-202ENST00000321117 WFDC11Q8NEX6 87 aa9.02□□□□□ -0.97
DNMT3A-202ENST00000321117 CCKP06307 115 aa9.02□□□□□ -0.97
DNMT3A-202ENST00000321117 CD164L2Q6UWJ8 174 aa9.02□□□□□ -0.97
DNMT3A-202ENST00000321117 SPART-AS1P0CW21 52 aa9.02□□□□□ -0.97
DNMT3A-202ENST00000321117 PPDPFQ9H3Y8 114 aa9.02□□□□□ -0.97
DNMT3A-202ENST00000321117 NKAPP1Q8N9T2 125 aa9.01□□□□□ -0.97
DNMT3A-202ENST00000321117 LINC01006Q8NI28 216 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms