RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 FAM19A3Q7Z5A8 133 aa10.05□□□□□ -0.8
VRK3-201ENST00000316763 OVOL2Q9BRP0 275 aa10.05□□□□□ -0.8
VRK3-201ENST00000316763 GTSF1LQ9H1H1 148 aa10.05□□□□□ -0.8
VRK3-201ENST00000316763 NOTCH1P46531 2555 aa10.05□□□□□ -0.8
VRK3-201ENST00000316763 UBE2L6O14933 153 aa10.05□□□□□ -0.8
VRK3-201ENST00000316763 GAGE7O76087 117 aa10.05□□□□□ -0.8
VRK3-201ENST00000316763 GAGE12FP0CL80 117 aa10.05□□□□□ -0.8
VRK3-201ENST00000316763 GAGE12GP0CL81 117 aa10.05□□□□□ -0.8
VRK3-201ENST00000316763 GAGE12IP0CL82 117 aa10.05□□□□□ -0.8
VRK3-201ENST00000316763 Q1RN00 199 aa10.05□□□□□ -0.8
VRK3-201ENST00000316763 NDUFA1O15239 70 aa10.04□□□□□ -0.8
VRK3-201ENST00000316763 IFITM1P13164 125 aa10.04□□□□□ -0.8
VRK3-201ENST00000316763 CIRBPQ14011 172 aaKnown RBP10.04□□□□□ -0.8
VRK3-201ENST00000316763 KPRPQ5T749 579 aaPredicted RBP10.04□□□□□ -0.8
VRK3-201ENST00000316763 NTM-AS1Q6ZSK4 140 aa10.04□□□□□ -0.8
VRK3-201ENST00000316763 SBSPONQ8IVN8 264 aa10.04□□□□□ -0.8
VRK3-201ENST00000316763 TMEM101Q96IK0 257 aa10.04□□□□□ -0.8
VRK3-201ENST00000316763 TMEM243Q9BU79 118 aa10.04□□□□□ -0.8
VRK3-201ENST00000316763 NBEAL1Q6ZS30 2694 aa10.04□□□□□ -0.8
VRK3-201ENST00000316763 TRBV6-4A0A1B0GX49 114 aa10.03□□□□□ -0.8
VRK3-201ENST00000316763 PLAC8L1A1L4L8 177 aa10.03□□□□□ -0.8
VRK3-201ENST00000316763 LINC00694P0DN24 101 aa10.03□□□□□ -0.8
VRK3-201ENST00000316763 LINC00242Q5T6M2 205 aa10.03□□□□□ -0.8
VRK3-201ENST00000316763 RNF183Q96D59 192 aa10.03□□□□□ -0.8
VRK3-201ENST00000316763 TRGV4A0A0C4DH28 118 aa10.03□□□□□ -0.8
VRK3-201ENST00000316763 A8MZ25 164 aa10.03□□□□□ -0.8
VRK3-201ENST00000316763 H7C2G1 150 aa10.03□□□□□ -0.8
VRK3-201ENST00000316763 EIF4EBP3O60516 100 aaPredicted RBP10.03□□□□□ -0.8
VRK3-201ENST00000316763 ADAMTSL4-AS1Q5T5F5 129 aa10.03□□□□□ -0.8
VRK3-201ENST00000316763 H7C423 109 aa10.02□□□□□ -0.81
VRK3-201ENST00000316763 PRB2P02812 416 aaPredicted RBP10.02□□□□□ -0.81
VRK3-201ENST00000316763 SMCPP49901 116 aaPredicted RBP10.02□□□□□ -0.81
VRK3-201ENST00000316763 COX6A2Q02221 97 aa10.02□□□□□ -0.81
VRK3-201ENST00000316763 KIR2DL5BQ8NHK3 375 aa10.02□□□□□ -0.81
VRK3-201ENST00000316763 IGLV5-39A0A0G2JS06 123 aa10.01□□□□□ -0.81
VRK3-201ENST00000316763 CDC42SE2Q9NRR3 84 aa10.01□□□□□ -0.81
VRK3-201ENST00000316763 TRAV13-1A0A0B4J241 112 aa10.01□□□□□ -0.81
VRK3-201ENST00000316763 FOXI1Q12951 378 aa10.01□□□□□ -0.81
VRK3-201ENST00000316763 TRBV30A0A0K0K1B3 111 aa10□□□□□ -0.81
VRK3-201ENST00000316763 COPS9Q8WXC6 57 aa10□□□□□ -0.81
VRK3-201ENST00000316763 GAGE12HA6NDE8 117 aa9.99□□□□□ -0.81
VRK3-201ENST00000316763 IGHV4-30-4P0DP06 118 aa9.99□□□□□ -0.81
VRK3-201ENST00000316763 ATXN8Q156A1 80 aa9.99□□□□□ -0.81
VRK3-201ENST00000316763 TEN1Q86WV5 123 aa9.99□□□□□ -0.81
VRK3-201ENST00000316763 APOC4P55056 127 aa9.99□□□□□ -0.81
VRK3-201ENST00000316763 PPDPFLQ8WWR9 84 aa9.99□□□□□ -0.81
VRK3-201ENST00000316763 SIGMAR1Q99720 223 aa9.99□□□□□ -0.81
VRK3-201ENST00000316763 SMIM1B2RUZ4 78 aa9.98□□□□□ -0.81
VRK3-201ENST00000316763 M0QXV9 152 aa9.98□□□□□ -0.81
VRK3-201ENST00000316763 COX6CP09669 75 aa9.98□□□□□ -0.81
VRK3-201ENST00000316763 Q9H8V8 135 aa9.98□□□□□ -0.81
VRK3-201ENST00000316763 DNAH3Q8TD57 4116 aa9.98□□□□□ -0.81
VRK3-201ENST00000316763 SPATA25Q9BR10 227 aa9.97□□□□□ -0.81
VRK3-201ENST00000316763 LOC100131303A0A0U1RQF7 123 aa9.97□□□□□ -0.81
VRK3-201ENST00000316763 NPC2P61916 151 aa9.97□□□□□ -0.81
VRK3-201ENST00000316763 FHL2Q14192 279 aa9.97□□□□□ -0.81
VRK3-201ENST00000316763 C9JAW5 83 aa9.96□□□□□ -0.81
VRK3-201ENST00000316763 SLC25A20O43772 301 aa9.96□□□□□ -0.81
VRK3-201ENST00000316763 HERV-K104P63124 156 aa9.96□□□□□ -0.81
VRK3-201ENST00000316763 ICOSQ9Y6W8 199 aa9.96□□□□□ -0.81
VRK3-201ENST00000316763 K7EIL1 84 aa9.95□□□□□ -0.82
VRK3-201ENST00000316763 TRIAP1O43715 76 aa9.95□□□□□ -0.82
VRK3-201ENST00000316763 X6R8D5 127 aa9.95□□□□□ -0.82
VRK3-201ENST00000316763 F5H768 121 aa9.95□□□□□ -0.82
VRK3-201ENST00000316763 SMIM9A6NGZ8 99 aa9.94□□□□□ -0.82
VRK3-201ENST00000316763 LINC01620Q4KN68 170 aa9.94□□□□□ -0.82
VRK3-201ENST00000316763 TRBV6-8A0A0A6YYG3 113 aa9.94□□□□□ -0.82
VRK3-201ENST00000316763 GAGE6Q13070 117 aa9.94□□□□□ -0.82
VRK3-201ENST00000316763 MEIG1Q5JSS6 88 aa9.94□□□□□ -0.82
VRK3-201ENST00000316763 ANKRD29Q8N6D5 301 aa9.94□□□□□ -0.82
VRK3-201ENST00000316763 DAND5Q8N907 189 aa9.94□□□□□ -0.82
VRK3-201ENST00000316763 LINC00308Q8TCZ7 52 aa9.94□□□□□ -0.82
VRK3-201ENST00000316763 SCGB1A1P11684 91 aa9.93□□□□□ -0.82
VRK3-201ENST00000316763 RPL13AP40429 203 aaKnown RBP9.93□□□□□ -0.82
VRK3-201ENST00000316763 DEFB135Q30KP9 77 aa9.93□□□□□ -0.82
VRK3-201ENST00000316763 ZNF625Q96I27 306 aaPredicted RBP9.93□□□□□ -0.82
VRK3-201ENST00000316763 CHCHD5Q9BSY4 110 aa9.93□□□□□ -0.82
VRK3-201ENST00000316763 DEFB121Q5J5C9 76 aa9.92□□□□□ -0.82
VRK3-201ENST00000316763 CARD19Q96LW7 228 aa9.92□□□□□ -0.82
VRK3-201ENST00000316763 DEFB130BP0DP73 79 aa9.92□□□□□ -0.82
VRK3-201ENST00000316763 DEFB130AP0DP74 79 aa9.92□□□□□ -0.82
VRK3-201ENST00000316763 LINC00612Q8N6U2 182 aa9.92□□□□□ -0.82
VRK3-201ENST00000316763 TRBV10-2A0A0K0K1G8 114 aa9.9□□□□□ -0.82
VRK3-201ENST00000316763 LINC01600Q96MT4 127 aa9.9□□□□□ -0.82
VRK3-201ENST00000316763 PPDPFQ9H3Y8 114 aa9.9□□□□□ -0.82
VRK3-201ENST00000316763 A0A0U1RRA0 63 aa9.9□□□□□ -0.83
VRK3-201ENST00000316763 COX7B2Q8TF08 81 aa9.9□□□□□ -0.83
VRK3-201ENST00000316763 MRAPQ8TCY5 172 aa9.89□□□□□ -0.83
VRK3-201ENST00000316763 TMEM262E9PQX1 116 aa9.88□□□□□ -0.83
VRK3-201ENST00000316763 IGLV4-60A0A075B6I1 120 aa9.88□□□□□ -0.83
VRK3-201ENST00000316763 IGKV3OR2-268A0A0C4DH90 116 aa9.88□□□□□ -0.83
VRK3-201ENST00000316763 GYPEP15421 78 aa9.88□□□□□ -0.83
VRK3-201ENST00000316763 Q8NAQ8 132 aa9.88□□□□□ -0.83
VRK3-201ENST00000316763 MIFP14174 115 aa9.87□□□□□ -0.83
VRK3-201ENST00000316763 NBEAL2Q6ZNJ1 2754 aa9.86□□□□□ -0.83
VRK3-201ENST00000316763 LYRM9A8MSI8 78 aa9.86□□□□□ -0.83
VRK3-201ENST00000316763 H3BT86 120 aa9.86□□□□□ -0.83
VRK3-201ENST00000316763 LST1O00453 97 aa9.86□□□□□ -0.83
VRK3-201ENST00000316763 C2orf82Q6UX34 121 aa9.86□□□□□ -0.83
VRK3-201ENST00000316763 CDIP1Q9H305 208 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms