RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 DNAH3Q8TD57 4116 aa11.5□□□□□ -0.57
CLCF1-201ENST00000312438 IGLV5-39A0A0G2JS06 123 aa11.5□□□□□ -0.57
CLCF1-201ENST00000312438 CCL25O15444 150 aa11.5□□□□□ -0.57
CLCF1-201ENST00000312438 SMIM1B2RUZ4 78 aa11.49□□□□□ -0.57
CLCF1-201ENST00000312438 SRSF9Q13242 221 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLCF1-201ENST00000312438 SS18Q15532 418 aa11.49□□□□□ -0.57
CLCF1-201ENST00000312438 ZFAND6Q6FIF0 208 aa11.49□□□□□ -0.57
CLCF1-201ENST00000312438 LURAP1LQ8IV03 231 aa11.49□□□□□ -0.57
CLCF1-201ENST00000312438 NDUFA12Q9UI09 145 aa11.49□□□□□ -0.57
CLCF1-201ENST00000312438 PTTG1IPP53801 180 aa11.49□□□□□ -0.57
CLCF1-201ENST00000312438 SPANXB1Q9NS25 103 aaPredicted RBP11.49□□□□□ -0.57
CLCF1-201ENST00000312438 IGHV3OR16-9A0A0B4J2B5 98 aa11.48□□□□□ -0.57
CLCF1-201ENST00000312438 FXYD2P54710 66 aa11.48□□□□□ -0.57
CLCF1-201ENST00000312438 MGAM2Q2M2H8 2515 aa11.48□□□□□ -0.57
CLCF1-201ENST00000312438 TRAV10A0A0B4J240 114 aa11.47□□□□□ -0.57
CLCF1-201ENST00000312438 ANGP03950 147 aaKnown RBP11.47□□□□□ -0.57
CLCF1-201ENST00000312438 LINC00269Q8N2A0 174 aa11.47□□□□□ -0.57
CLCF1-201ENST00000312438 C10orf126Q8N4M7 172 aa11.47□□□□□ -0.57
CLCF1-201ENST00000312438 A0A0J9YXY3 114 aa11.46□□□□□ -0.57
CLCF1-201ENST00000312438 TAX1BP3O14907 124 aa11.46□□□□□ -0.58
CLCF1-201ENST00000312438 NBEAL1Q6ZS30 2694 aa11.45□□□□□ -0.58
CLCF1-201ENST00000312438 A0A087WZ39 114 aa11.45□□□□□ -0.58
CLCF1-201ENST00000312438 K7EP13 123 aa11.44□□□□□ -0.58
CLCF1-201ENST00000312438 NDUFA1O15239 70 aa11.44□□□□□ -0.58
CLCF1-201ENST00000312438 REG3AQ06141 175 aa11.44□□□□□ -0.58
CLCF1-201ENST00000312438 TMEM238C9JI98 176 aa11.44□□□□□ -0.58
CLCF1-201ENST00000312438 SMIM13P0DJ93 91 aa11.44□□□□□ -0.58
CLCF1-201ENST00000312438 Q8N3U1 123 aa11.44□□□□□ -0.58
CLCF1-201ENST00000312438 COX11Q9Y6N1 276 aa11.44□□□□□ -0.58
CLCF1-201ENST00000312438 ESRGQ1W209 222 aa11.43□□□□□ -0.58
CLCF1-201ENST00000312438 CLPSL2Q6UWE3 100 aa11.43□□□□□ -0.58
CLCF1-201ENST00000312438 B9D2Q9BPU9 175 aa11.43□□□□□ -0.58
CLCF1-201ENST00000312438 IGHV3-30P01768 117 aa11.42□□□□□ -0.58
CLCF1-201ENST00000312438 IGHV3-30-5P0DP03 117 aa11.42□□□□□ -0.58
CLCF1-201ENST00000312438 XCL1P47992 114 aa11.42□□□□□ -0.58
CLCF1-201ENST00000312438 Q6ZVH6 145 aa11.42□□□□□ -0.58
CLCF1-201ENST00000312438 C5orf38Q86SI9 138 aa11.42□□□□□ -0.58
CLCF1-201ENST00000312438 C15orf53Q8NAA6 179 aa11.42□□□□□ -0.58
CLCF1-201ENST00000312438 NHP2Q9NX24 153 aaKnown RBP11.42□□□□□ -0.58
CLCF1-201ENST00000312438 TMEM238LA0A1B0GVL6 79 aa11.41□□□□□ -0.58
CLCF1-201ENST00000312438 A6NJY4 79 aa11.41□□□□□ -0.58
CLCF1-201ENST00000312438 CD164L2Q6UWJ8 174 aa11.41□□□□□ -0.58
CLCF1-201ENST00000312438 LINC01561Q8N1V8 128 aa11.41□□□□□ -0.58
CLCF1-201ENST00000312438 Q9H8V8 135 aa11.41□□□□□ -0.58
CLCF1-201ENST00000312438 COX7B2Q8TF08 81 aa11.4□□□□□ -0.58
CLCF1-201ENST00000312438 PRR34Q9NV39 138 aa11.4□□□□□ -0.58
CLCF1-201ENST00000312438 KLK12Q9UKR0 248 aa11.4□□□□□ -0.58
CLCF1-201ENST00000312438 TIMM17BO60830 172 aa11.39□□□□□ -0.59
CLCF1-201ENST00000312438 CIRBPQ14011 172 aaKnown RBP11.39□□□□□ -0.59
CLCF1-201ENST00000312438 CHCHD10Q8WYQ3 142 aaPredicted RBP11.39□□□□□ -0.59
CLCF1-201ENST00000312438 ZNF625Q96I27 306 aaPredicted RBP11.39□□□□□ -0.59
CLCF1-201ENST00000312438 LITAFQ99732 161 aa11.39□□□□□ -0.59
CLCF1-201ENST00000312438 TENM3Q9P273 2699 aa11.39□□□□□ -0.59
CLCF1-201ENST00000312438 HERV-K104P63124 156 aa11.39□□□□□ -0.59
CLCF1-201ENST00000312438 A0A1B0GWB2 263 aa11.38□□□□□ -0.59
CLCF1-201ENST00000312438 IGHV3-33P01772 117 aa11.38□□□□□ -0.59
CLCF1-201ENST00000312438 WFDC10BQ8IUB3 73 aa11.38□□□□□ -0.59
CLCF1-201ENST00000312438 RAB37Q96AX2 223 aa11.38□□□□□ -0.59
CLCF1-201ENST00000312438 C9orf118A6NHY6 69 aa11.37□□□□□ -0.59
CLCF1-201ENST00000312438 SPANXDQ9BXN6 97 aa11.37□□□□□ -0.59
CLCF1-201ENST00000312438 SPANXCQ9NY87 97 aa11.37□□□□□ -0.59
CLCF1-201ENST00000312438 TOMM7Q9P0U1 55 aa11.37□□□□□ -0.59
CLCF1-201ENST00000312438 IGLV10-54A0A075B6I4 117 aa11.37□□□□□ -0.59
CLCF1-201ENST00000312438 ADAMTSL4-AS1Q5T5F5 129 aa11.37□□□□□ -0.59
CLCF1-201ENST00000312438 MUSTN1Q8IVN3 82 aa11.37□□□□□ -0.59
CLCF1-201ENST00000312438 COX7A2LO14548 114 aa11.36□□□□□ -0.59
CLCF1-201ENST00000312438 PRSS2P07478 247 aa11.36□□□□□ -0.59
CLCF1-201ENST00000312438 RPL24P83731 157 aaKnown RBP11.36□□□□□ -0.59
CLCF1-201ENST00000312438 ENHOQ6UWT2 76 aa11.36□□□□□ -0.59
CLCF1-201ENST00000312438 K7ERJ3 54 aa11.35□□□□□ -0.59
CLCF1-201ENST00000312438 NHLRC4P0CG21 123 aaPredicted RBP11.35□□□□□ -0.59
CLCF1-201ENST00000312438 TRAV8-4A0A0B4J246 113 aa11.35□□□□□ -0.59
CLCF1-201ENST00000312438 CRPP02741 224 aa11.35□□□□□ -0.59
CLCF1-201ENST00000312438 MIAQ16674 131 aa11.35□□□□□ -0.59
CLCF1-201ENST00000312438 C6orf226Q5I0X4 101 aa11.35□□□□□ -0.59
CLCF1-201ENST00000312438 SFTA2Q6UW10 78 aa11.34□□□□□ -0.59
CLCF1-201ENST00000312438 IGLL5B9A064 214 aa11.33□□□□□ -0.6
CLCF1-201ENST00000312438 IFITM1P13164 125 aa11.33□□□□□ -0.6
CLCF1-201ENST00000312438 FOXI1Q12951 378 aa11.33□□□□□ -0.6
CLCF1-201ENST00000312438 KRTAP21-3Q3LHN1 58 aa11.33□□□□□ -0.6
CLCF1-201ENST00000312438 LINC01556Q5JQF7 62 aa11.33□□□□□ -0.6
CLCF1-201ENST00000312438 UBE2WQ96B02 151 aa11.33□□□□□ -0.6
CLCF1-201ENST00000312438 H3BUT2 72 aa11.32□□□□□ -0.6
CLCF1-201ENST00000312438 MALP21145 153 aa11.32□□□□□ -0.6
CLCF1-201ENST00000312438 VAMP3Q15836 100 aa11.32□□□□□ -0.6
CLCF1-201ENST00000312438 MEIG1Q5JSS6 88 aa11.32□□□□□ -0.6
CLCF1-201ENST00000312438 Q8IZM0 81 aa11.32□□□□□ -0.6
CLCF1-201ENST00000312438 A4D1N5 150 aa11.32□□□□□ -0.6
CLCF1-201ENST00000312438 GAGE12HA6NDE8 117 aa11.32□□□□□ -0.6
CLCF1-201ENST00000312438 CFC1BP0CG36 223 aa11.31□□□□□ -0.6
CLCF1-201ENST00000312438 CFC1P0CG37 223 aa11.31□□□□□ -0.6
CLCF1-201ENST00000312438 CCL18P55774 89 aa11.31□□□□□ -0.6
CLCF1-201ENST00000312438 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.3□□□□□ -0.6
CLCF1-201ENST00000312438 APOMO95445 188 aa11.3□□□□□ -0.6
CLCF1-201ENST00000312438 COPS9Q8WXC6 57 aa11.3□□□□□ -0.6
CLCF1-201ENST00000312438 LINC00588Q9Y4M8 146 aa11.3□□□□□ -0.6
CLCF1-201ENST00000312438 DNAH10OSP0CZ25 163 aa11.29□□□□□ -0.6
CLCF1-201ENST00000312438 A0A0U1RRA0 63 aa11.28□□□□□ -0.6
CLCF1-201ENST00000312438 DAND5Q8N907 189 aa11.28□□□□□ -0.6
CLCF1-201ENST00000312438 NAA38Q9BRA0 125 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms