RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 EIF4EBP1Q13541 118 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-201ENST00000309964 SERP1Q9Y6X1 66 aa2.36□□□□□ -2.03
CLOCK-201ENST00000309964 A0A1B0GXF2 115 aa2.36□□□□□ -2.03
CLOCK-201ENST00000309964 IGKV2-24A0A0C4DH68 120 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 C2orf48Q96LS8 159 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 RBX1P62877 108 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 FHL3Q13643 280 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 COX8CQ7Z4L0 72 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 Q8N2B8 174 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 J3KT08 172 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 RNASE13Q5GAN3 156 aaKnown RBP2.35□□□□□ -2.03
CLOCK-201ENST00000309964 NEXN-AS1Q8NBZ9 246 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 RPL39P62891 51 aaKnown RBP2.35□□□□□ -2.03
CLOCK-201ENST00000309964 TAX1BP3O14907 124 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 LINC00173Q6ZV60 143 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 SELENOKQ9Y6D0 94 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 Q6ZUT4 128 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 RSPO3Q9BXY4 272 aaPredicted RBP2.35□□□□□ -2.03
CLOCK-201ENST00000309964 MSRB1Q9NZV6 116 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 IGLV4-3A0A075B6K6 122 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 MSMPQ1L6U9 139 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 C9orf85Q96MD7 179 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 C11orf1Q9H5F2 150 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 C1orf134Q5TEV5 83 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 FAM19A1Q7Z5A9 133 aa2.35□□□□□ -2.03
CLOCK-201ENST00000309964 NTN5Q8WTR8 489 aaPredicted RBP2.35□□□□□ -2.03
CLOCK-201ENST00000309964 LOC105371267A0A1B0GV96 52 aa2.34□□□□□ -2.03
CLOCK-201ENST00000309964 IGLV5-52A0A0A0MRZ9 124 aa2.34□□□□□ -2.03
CLOCK-201ENST00000309964 WFDC9Q8NEX5 89 aa2.34□□□□□ -2.03
CLOCK-201ENST00000309964 ESM1Q9NQ30 184 aa2.34□□□□□ -2.03
CLOCK-201ENST00000309964 TEX15Q9BXT5 2789 aa2.34□□□□□ -2.03
CLOCK-201ENST00000309964 FRMD6-AS1P0C7T7 363 aa2.34□□□□□ -2.04
CLOCK-201ENST00000309964 UBE2D2P62837 147 aa2.34□□□□□ -2.04
CLOCK-201ENST00000309964 TMEM223A0PJW6 202 aa2.34□□□□□ -2.04
CLOCK-201ENST00000309964 NDUFC2-KCTD14E9PQ53 114 aa2.34□□□□□ -2.04
CLOCK-201ENST00000309964 LINC00308Q8TCZ7 52 aa2.34□□□□□ -2.04
CLOCK-201ENST00000309964 PRAC2D3DTV9 90 aa2.34□□□□□ -2.04
CLOCK-201ENST00000309964 FAM229AH3BQW9 127 aa2.34□□□□□ -2.04
CLOCK-201ENST00000309964 REG3GQ6UW15 175 aa2.34□□□□□ -2.04
CLOCK-201ENST00000309964 CCKP06307 115 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 PCP2Q8IVA1 136 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 A0A0J9YWU9 116 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 POLR2KP53803 58 aaKnown RBP2.33□□□□□ -2.04
CLOCK-201ENST00000309964 CDC42SE2Q9NRR3 84 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 PRYO14603 147 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 DEFB104AQ8WTQ1 72 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 PROK1P58294 105 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 CDKN2A-AS1Q9UH64 79 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 A0A0C4DFX4 3053 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 DEFB4AO15263 64 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 SPATA3Q8NHX4 192 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 LINC00959A0A1B0GUT2 108 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 Q8N9L7 120 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 RNASE8Q8TDE3 154 aaKnown RBP2.33□□□□□ -2.04
CLOCK-201ENST00000309964 UQCRQO14949 82 aa2.33□□□□□ -2.04
CLOCK-201ENST00000309964 ANKRD39Q53RE8 183 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 BBC3Q96PG8 261 aaPredicted RBP2.32□□□□□ -2.04
CLOCK-201ENST00000309964 LAMA3Q16787 3333 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 SETXQ7Z333 2677 aaKnown RBP2.32□□□□□ -2.04
CLOCK-201ENST00000309964 FOXI1Q12951 378 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 XIRP2A4UGR9 3374 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 TRANK1O15050 2925 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.32□□□□□ -2.04
CLOCK-201ENST00000309964 NUPR1O60356 82 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 RNASE3P12724 160 aaKnown RBP2.32□□□□□ -2.04
CLOCK-201ENST00000309964 TEX49A0A1B0GTD5 131 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 LST1O00453 97 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 ZNF73O43830 326 aaPredicted RBP2.32□□□□□ -2.04
CLOCK-201ENST00000309964 OXLD1Q5BKU9 147 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 VPS13AQ96RL7 3174 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 EDN2P20800 178 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 FAM19A3Q7Z5A8 133 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 UNC79Q9P2D8 2635 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 C6orf99Q4VX62 202 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 RANBP2P49792 3224 aaKnown RBP2.32□□□□□ -2.04
CLOCK-201ENST00000309964 GCN1Q92616 2671 aaKnown RBP2.32□□□□□ -2.04
CLOCK-201ENST00000309964 MKI67P46013 3256 aaKnown RBP2.32□□□□□ -2.04
CLOCK-201ENST00000309964 C3orf84H3BNL1 204 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 BEAN1Q3B7T3 259 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 ASPHD1Q5U4P2 390 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 M0QXV9 152 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 C5orf47Q569G3 176 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 LINC01556Q5JQF7 62 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 DAND5Q8N907 189 aa2.32□□□□□ -2.04
CLOCK-201ENST00000309964 NCR3O14931 201 aa2.31□□□□□ -2.04
CLOCK-201ENST00000309964 FAM236AA0A1B0GUQ0 79 aa2.31□□□□□ -2.04
CLOCK-201ENST00000309964 FAM236BA0A1B0GV22 79 aa2.31□□□□□ -2.04
CLOCK-201ENST00000309964 WWC2-AS2Q96NR7 200 aa2.31□□□□□ -2.04
CLOCK-201ENST00000309964 FAM240AA0A1B0GVK7 77 aa2.31□□□□□ -2.04
CLOCK-201ENST00000309964 ODF3L2Q3SX64 289 aa2.31□□□□□ -2.04
CLOCK-201ENST00000309964 C1orf229Q6ZS94 237 aaPredicted RBP2.31□□□□□ -2.04
CLOCK-201ENST00000309964 NRACQ8N912 160 aa2.31□□□□□ -2.04
CLOCK-201ENST00000309964 LRCOL1A6NCL2 159 aa2.31□□□□□ -2.04
CLOCK-201ENST00000309964 ZNF80P51504 273 aaPredicted RBP2.31□□□□□ -2.04
CLOCK-201ENST00000309964 FAM19A5Q7Z5A7 132 aaPredicted RBP2.31□□□□□ -2.04
CLOCK-201ENST00000309964 NBEAL1Q6ZS30 2694 aa2.31□□□□□ -2.04
CLOCK-201ENST00000309964 PLAC8L1A1L4L8 177 aa2.31□□□□□ -2.04
CLOCK-201ENST00000309964 TP53AIP1Q9HCN2 124 aa2.31□□□□□ -2.04
CLOCK-201ENST00000309964 DMBT1Q9UGM3 2413 aaPredicted RBP2.31□□□□□ -2.04
CLOCK-201ENST00000309964 ZNF22P17026 224 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms