RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 C2orf91Q6ZV80 131 aa4.77□□□□□ -1.65
PTCD2-201ENST00000308077 C2orf88Q9BSF0 95 aa4.77□□□□□ -1.65
PTCD2-201ENST00000308077 MUC2Q02817 5179 aa4.76□□□□□ -1.65
PTCD2-201ENST00000308077 A0A1B0GUV1 79 aa4.76□□□□□ -1.65
PTCD2-201ENST00000308077 TINCRA0A1B0GVN0 87 aa4.76□□□□□ -1.65
PTCD2-201ENST00000308077 ESRGQ1W209 222 aa4.76□□□□□ -1.65
PTCD2-201ENST00000308077 FAM19A3Q7Z5A8 133 aa4.76□□□□□ -1.65
PTCD2-201ENST00000308077 MAPKAPK5-AS1Q8N8E1 139 aa4.76□□□□□ -1.65
PTCD2-201ENST00000308077 TRAV13-1A0A0B4J241 112 aa4.75□□□□□ -1.65
PTCD2-201ENST00000308077 NMUP48645 174 aa4.75□□□□□ -1.65
PTCD2-201ENST00000308077 COX6A2Q02221 97 aa4.75□□□□□ -1.65
PTCD2-201ENST00000308077 TMEM170BQ5T4T1 132 aa4.75□□□□□ -1.65
PTCD2-201ENST00000308077 LINC00242Q5T6M2 205 aa4.75□□□□□ -1.65
PTCD2-201ENST00000308077 SLC25A34Q6PIV7 304 aa4.75□□□□□ -1.65
PTCD2-201ENST00000308077 IGKV3OR2-268A0A0C4DH90 116 aa4.75□□□□□ -1.65
PTCD2-201ENST00000308077 TMEM223A0PJW6 202 aa4.75□□□□□ -1.65
PTCD2-201ENST00000308077 BATFQ16520 125 aa4.75□□□□□ -1.65
PTCD2-201ENST00000308077 WFDC10BQ8IUB3 73 aa4.75□□□□□ -1.65
PTCD2-201ENST00000308077 BOD1L2Q8IYS8 172 aa4.75□□□□□ -1.65
PTCD2-201ENST00000308077 C15orf53Q8NAA6 179 aa4.75□□□□□ -1.65
PTCD2-201ENST00000308077 STAB2Q8WWQ8 2551 aa4.75□□□□□ -1.65
PTCD2-201ENST00000308077 IGLV5-45A0A087WSX0 123 aa4.74□□□□□ -1.65
PTCD2-201ENST00000308077 A0A1B0GV90 55 aa4.74□□□□□ -1.65
PTCD2-201ENST00000308077 IGLL5B9A064 214 aa4.74□□□□□ -1.65
PTCD2-201ENST00000308077 E9PLD3 99 aa4.74□□□□□ -1.65
PTCD2-201ENST00000308077 M0R143 59 aa4.74□□□□□ -1.65
PTCD2-201ENST00000308077 HINT1P49773 126 aaPredicted RBP4.74□□□□□ -1.65
PTCD2-201ENST00000308077 CLPSL2Q6UWE3 100 aa4.74□□□□□ -1.65
PTCD2-201ENST00000308077 MRPS16Q9Y3D3 137 aaKnown RBP4.74□□□□□ -1.65
PTCD2-201ENST00000308077 DNAH7Q8WXX0 4024 aa4.74□□□□□ -1.65
PTCD2-201ENST00000308077 TRAV8-6A0A0B4J262 113 aa4.74□□□□□ -1.65
PTCD2-201ENST00000308077 TSPEAR-AS2P59090 65 aa4.74□□□□□ -1.65
PTCD2-201ENST00000308077 LINC00469Q8N7U9 141 aa4.74□□□□□ -1.65
PTCD2-201ENST00000308077 CDKN2A-AS1Q9UH64 79 aa4.74□□□□□ -1.65
PTCD2-201ENST00000308077 CSMD3Q7Z407 3707 aa4.73□□□□□ -1.65
PTCD2-201ENST00000308077 IGHV3-64A0A075B6Q5 118 aa4.73□□□□□ -1.65
PTCD2-201ENST00000308077 LINC00959A0A1B0GUT2 108 aa4.73□□□□□ -1.65
PTCD2-201ENST00000308077 ANGP03950 147 aaKnown RBP4.73□□□□□ -1.65
PTCD2-201ENST00000308077 SPINK8P0C7L1 97 aa4.73□□□□□ -1.65
PTCD2-201ENST00000308077 HERVK_113P63121 156 aa4.73□□□□□ -1.65
PTCD2-201ENST00000308077 Q6ZVH6 145 aa4.73□□□□□ -1.65
PTCD2-201ENST00000308077 LINC00269Q8N2A0 174 aa4.73□□□□□ -1.65
PTCD2-201ENST00000308077 GEMIN7Q9H840 131 aaKnown RBP4.73□□□□□ -1.65
PTCD2-201ENST00000308077 TRAV8-3A0A0A6YYJ7 113 aa4.72□□□□□ -1.65
PTCD2-201ENST00000308077 IGHV3-30P01768 117 aa4.72□□□□□ -1.65
PTCD2-201ENST00000308077 IGHV3-33P01772 117 aa4.72□□□□□ -1.65
PTCD2-201ENST00000308077 IGHV3-30-3P0DP02 117 aa4.72□□□□□ -1.65
PTCD2-201ENST00000308077 IGHV3-30-5P0DP03 117 aa4.72□□□□□ -1.65
PTCD2-201ENST00000308077 HERVK_113P61574 105 aa4.72□□□□□ -1.65
PTCD2-201ENST00000308077 LINC00588Q9Y4M8 146 aa4.72□□□□□ -1.65
PTCD2-201ENST00000308077 DLEU1O43261 78 aa4.72□□□□□ -1.65
PTCD2-201ENST00000308077 SMCPP49901 116 aaPredicted RBP4.72□□□□□ -1.65
PTCD2-201ENST00000308077 SEC11AP67812 179 aa4.72□□□□□ -1.65
PTCD2-201ENST00000308077 REG3AQ06141 175 aa4.72□□□□□ -1.65
PTCD2-201ENST00000308077 LEPROTO15243 131 aa4.71□□□□□ -1.65
PTCD2-201ENST00000308077 KRTAP4-5Q9BYR2 181 aa4.71□□□□□ -1.65
PTCD2-201ENST00000308077 KLK12Q9UKR0 248 aa4.71□□□□□ -1.65
PTCD2-201ENST00000308077 IGHV3OR16-9A0A0B4J2B5 98 aa4.71□□□□□ -1.66
PTCD2-201ENST00000308077 IGHV1-58A0A0C4DH39 117 aa4.71□□□□□ -1.66
PTCD2-201ENST00000308077 SMIM1B2RUZ4 78 aa4.71□□□□□ -1.66
PTCD2-201ENST00000308077 J3QQQ9 107 aa4.71□□□□□ -1.66
PTCD2-201ENST00000308077 CCL25O15444 150 aa4.71□□□□□ -1.66
PTCD2-201ENST00000308077 BVES-AS1Q5T3Y7 98 aa4.71□□□□□ -1.66
PTCD2-201ENST00000308077 ENHOQ6UWT2 76 aa4.71□□□□□ -1.66
PTCD2-201ENST00000308077 PRR34Q9NV39 138 aa4.71□□□□□ -1.66
PTCD2-201ENST00000308077 APLNQ9ULZ1 77 aa4.71□□□□□ -1.66
PTCD2-201ENST00000308077 STARD9Q9P2P6 4700 aa4.71□□□□□ -1.66
PTCD2-201ENST00000308077 LYSTQ99698 3801 aa4.71□□□□□ -1.66
PTCD2-201ENST00000308077 IGLV10-54A0A075B6I4 117 aa4.7□□□□□ -1.66
PTCD2-201ENST00000308077 IGLV5-39A0A0G2JS06 123 aa4.7□□□□□ -1.66
PTCD2-201ENST00000308077 MYMXA0A1B0GTQ4 84 aa4.7□□□□□ -1.66
PTCD2-201ENST00000308077 H3BRM9 83 aa4.7□□□□□ -1.66
PTCD2-201ENST00000308077 K7EP13 123 aa4.7□□□□□ -1.66
PTCD2-201ENST00000308077 XCL1P47992 114 aa4.7□□□□□ -1.66
PTCD2-201ENST00000308077 SS18Q15532 418 aa4.7□□□□□ -1.66
PTCD2-201ENST00000308077 LINC01556Q5JQF7 62 aa4.7□□□□□ -1.66
PTCD2-201ENST00000308077 PLEKHB2Q96CS7 222 aa4.7□□□□□ -1.66
PTCD2-201ENST00000308077 PLECQ15149 4684 aaKnown RBP4.7□□□□□ -1.66
PTCD2-201ENST00000308077 ZNF815PA8K554 130 aa4.7□□□□□ -1.66
PTCD2-201ENST00000308077 KRTAP9-7A8MTY7 169 aa4.7□□□□□ -1.66
PTCD2-201ENST00000308077 CCL18P55774 89 aa4.7□□□□□ -1.66
PTCD2-201ENST00000308077 C5orf38Q86SI9 138 aa4.7□□□□□ -1.66
PTCD2-201ENST00000308077 CHCHD10Q8WYQ3 142 aaPredicted RBP4.7□□□□□ -1.66
PTCD2-201ENST00000308077 A0A087WZ39 114 aa4.69□□□□□ -1.66
PTCD2-201ENST00000308077 NUPR2A6NF83 97 aa4.69□□□□□ -1.66
PTCD2-201ENST00000308077 DNAH10OSP0CZ25 163 aa4.69□□□□□ -1.66
PTCD2-201ENST00000308077 LGALS3P17931 250 aaKnown RBP4.69□□□□□ -1.66
PTCD2-201ENST00000308077 SIVA1O15304 175 aa4.68□□□□□ -1.66
PTCD2-201ENST00000308077 FOXI1Q12951 378 aa4.68□□□□□ -1.66
PTCD2-201ENST00000308077 CD164L2Q6UWJ8 174 aa4.68□□□□□ -1.66
PTCD2-201ENST00000308077 UBE2WQ96B02 151 aa4.68□□□□□ -1.66
PTCD2-201ENST00000308077 UPK3BQ9BT76 320 aa4.68□□□□□ -1.66
PTCD2-201ENST00000308077 LBHQ53QV2 105 aaPredicted RBP4.68□□□□□ -1.66
PTCD2-201ENST00000308077 CASC10Q5T4H9 136 aa4.68□□□□□ -1.66
PTCD2-201ENST00000308077 ZFAND6Q6FIF0 208 aa4.68□□□□□ -1.66
PTCD2-201ENST00000308077 C10orf126Q8N4M7 172 aa4.68□□□□□ -1.66
PTCD2-201ENST00000308077 HIGD1BQ9P298 99 aa4.68□□□□□ -1.66
PTCD2-201ENST00000308077 GAGE12HA6NDE8 117 aa4.67□□□□□ -1.66
PTCD2-201ENST00000308077 CRPP02741 224 aa4.67□□□□□ -1.66
PTCD2-201ENST00000308077 COL5A1-AS1Q5SY13 56 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms