RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 TEX49A0A1B0GTD5 131 aa5.01□□□□□ -1.61
RGPD3-201ENST00000304514 TRGV4A0A0C4DH28 118 aa5.01□□□□□ -1.61
RGPD3-201ENST00000304514 GAGE6Q13070 117 aa5.01□□□□□ -1.61
RGPD3-201ENST00000304514 CIRBPQ14011 172 aaKnown RBP5.01□□□□□ -1.61
RGPD3-201ENST00000304514 C22orf24Q9Y442 160 aa5.01□□□□□ -1.61
RGPD3-201ENST00000304514 DYNC2H1Q8NCM8 4307 aaKnown RBP5.01□□□□□ -1.61
RGPD3-201ENST00000304514 PRSS2P07478 247 aa5.01□□□□□ -1.61
RGPD3-201ENST00000304514 COPS9Q8WXC6 57 aa5.01□□□□□ -1.61
RGPD3-201ENST00000304514 IGKV2-28A0A075B6P5 120 aa5.01□□□□□ -1.61
RGPD3-201ENST00000304514 IGHV3OR16-9A0A0B4J2B5 98 aa5.01□□□□□ -1.61
RGPD3-201ENST00000304514 IGKV2D-28P01615 120 aa5.01□□□□□ -1.61
RGPD3-201ENST00000304514 MAP1AP78559 2803 aaPredicted RBP5□□□□□ -1.61
RGPD3-201ENST00000304514 A0A087WZ39 114 aa5□□□□□ -1.61
RGPD3-201ENST00000304514 H3BT86 120 aa5□□□□□ -1.61
RGPD3-201ENST00000304514 UBE2WQ96B02 151 aa5□□□□□ -1.61
RGPD3-201ENST00000304514 COX7A2LO14548 114 aa5□□□□□ -1.61
RGPD3-201ENST00000304514 NTN5Q8WTR8 489 aaPredicted RBP5□□□□□ -1.61
RGPD3-201ENST00000304514 CENPEQ02224 2701 aa5□□□□□ -1.61
RGPD3-201ENST00000304514 SMIM9A6NGZ8 99 aa5□□□□□ -1.61
RGPD3-201ENST00000304514 LINC00959A0A1B0GUT2 108 aa4.99□□□□□ -1.61
RGPD3-201ENST00000304514 PRIMA1Q86XR5 153 aa4.99□□□□□ -1.61
RGPD3-201ENST00000304514 A0A1B0GUV1 79 aa4.99□□□□□ -1.61
RGPD3-201ENST00000304514 FAM218AQ96MZ4 157 aa4.99□□□□□ -1.61
RGPD3-201ENST00000304514 FAM222AQ5U5X8 452 aa4.99□□□□□ -1.61
RGPD3-201ENST00000304514 LINC01561Q8N1V8 128 aa4.99□□□□□ -1.61
RGPD3-201ENST00000304514 CHD6Q8TD26 2715 aa4.99□□□□□ -1.61
RGPD3-201ENST00000304514 ZNF462Q96JM2 2506 aa4.98□□□□□ -1.61
RGPD3-201ENST00000304514 SPTAN1Q13813 2472 aaKnown RBP4.98□□□□□ -1.61
RGPD3-201ENST00000304514 C2orf82Q6UX34 121 aa4.98□□□□□ -1.61
RGPD3-201ENST00000304514 PF4P02776 101 aa4.98□□□□□ -1.61
RGPD3-201ENST00000304514 NBASA2RRP1 2371 aa4.98□□□□□ -1.61
RGPD3-201ENST00000304514 LYRM9A8MSI8 78 aa4.98□□□□□ -1.61
RGPD3-201ENST00000304514 TMEM262E9PQX1 116 aa4.98□□□□□ -1.61
RGPD3-201ENST00000304514 COX6CP09669 75 aa4.98□□□□□ -1.61
RGPD3-201ENST00000304514 GYPEP15421 78 aa4.98□□□□□ -1.61
RGPD3-201ENST00000304514 C9orf66Q5T8R8 295 aa4.98□□□□□ -1.61
RGPD3-201ENST00000304514 LINC00337Q8N6G1 96 aa4.98□□□□□ -1.61
RGPD3-201ENST00000304514 TRAV8-4A0A0B4J246 113 aa4.97□□□□□ -1.61
RGPD3-201ENST00000304514 RPL28P46779 137 aaKnown RBP4.97□□□□□ -1.61
RGPD3-201ENST00000304514 MEIG1Q5JSS6 88 aa4.97□□□□□ -1.61
RGPD3-201ENST00000304514 NIPBLQ6KC79 2804 aaeCLIP4.97□□□□□ -1.61
RGPD3-201ENST00000304514 A0A0U1RRA0 63 aa4.96□□□□□ -1.61
RGPD3-201ENST00000304514 IBA57-AS1B1ANH7 110 aa4.96□□□□□ -1.61
RGPD3-201ENST00000304514 TRACP01848 142 aa4.96□□□□□ -1.61
RGPD3-201ENST00000304514 DEFB130BP0DP73 79 aa4.96□□□□□ -1.61
RGPD3-201ENST00000304514 DEFB130AP0DP74 79 aa4.96□□□□□ -1.61
RGPD3-201ENST00000304514 MIR7-3HGQ8N6C7 128 aa4.96□□□□□ -1.61
RGPD3-201ENST00000304514 TRAV26-1A0A087WT03 109 aa4.96□□□□□ -1.62
RGPD3-201ENST00000304514 FAM240AA0A1B0GVK7 77 aa4.96□□□□□ -1.62
RGPD3-201ENST00000304514 Q8NAQ8 132 aa4.96□□□□□ -1.62
RGPD3-201ENST00000304514 CHCHD5Q9BSY4 110 aa4.96□□□□□ -1.62
RGPD3-201ENST00000304514 CELA1Q9UNI1 258 aa4.96□□□□□ -1.62
RGPD3-201ENST00000304514 HUWE1Q7Z6Z7 4374 aaKnown RBP4.96□□□□□ -1.62
RGPD3-201ENST00000304514 TRAV13-2A0A0B4J235 113 aa4.95□□□□□ -1.62
RGPD3-201ENST00000304514 INAFM1C9JVW0 142 aa4.95□□□□□ -1.62
RGPD3-201ENST00000304514 Q8IZM0 81 aa4.95□□□□□ -1.62
RGPD3-201ENST00000304514 USP9YO00507 2555 aaPredicted RBP4.95□□□□□ -1.62
RGPD3-201ENST00000304514 IGHV4-28A0A0C4DH34 117 aa4.95□□□□□ -1.62
RGPD3-201ENST00000304514 WIPF1O43516 503 aa4.95□□□□□ -1.62
RGPD3-201ENST00000304514 CCL18P55774 89 aa4.95□□□□□ -1.62
RGPD3-201ENST00000304514 SDIM1Q6ZPB5 146 aa4.95□□□□□ -1.62
RGPD3-201ENST00000304514 PRO0255Q9UI72 69 aa4.95□□□□□ -1.62
RGPD3-201ENST00000304514 Q8N3U1 123 aa4.95□□□□□ -1.62
RGPD3-201ENST00000304514 LYSTQ99698 3801 aa4.95□□□□□ -1.62
RGPD3-201ENST00000304514 OTOGQ6ZRI0 2925 aa4.95□□□□□ -1.62
RGPD3-201ENST00000304514 A0A087WYN8 130 aa4.95□□□□□ -1.62
RGPD3-201ENST00000304514 CKS1BP61024 79 aa4.94□□□□□ -1.62
RGPD3-201ENST00000304514 KIAA0087Q14695 138 aa4.94□□□□□ -1.62
RGPD3-201ENST00000304514 MRPL23Q16540 153 aaKnown RBP4.94□□□□□ -1.62
RGPD3-201ENST00000304514 SMIM11BQ8TCY0 68 aa4.94□□□□□ -1.62
RGPD3-201ENST00000304514 IGKV3OR2-268A0A0C4DH90 116 aa4.94□□□□□ -1.62
RGPD3-201ENST00000304514 Q6Q795 121 aa4.94□□□□□ -1.62
RGPD3-201ENST00000304514 OBSCN-AS1Q96MR7 158 aa4.94□□□□□ -1.62
RGPD3-201ENST00000304514 SND1-IT1Q9HBX3 110 aa4.94□□□□□ -1.62
RGPD3-201ENST00000304514 SMCR5Q8TEV8 140 aa4.93□□□□□ -1.62
RGPD3-201ENST00000304514 APOC4P55056 127 aa4.93□□□□□ -1.62
RGPD3-201ENST00000304514 LINC00167Q96N53 147 aa4.93□□□□□ -1.62
RGPD3-201ENST00000304514 SS18Q15532 418 aa4.93□□□□□ -1.62
RGPD3-201ENST00000304514 C5orf38Q86SI9 138 aa4.93□□□□□ -1.62
RGPD3-201ENST00000304514 CRPP02741 224 aa4.93□□□□□ -1.62
RGPD3-201ENST00000304514 DEFB135Q30KP9 77 aa4.93□□□□□ -1.62
RGPD3-201ENST00000304514 A0A096LPF7 62 aa4.92□□□□□ -1.62
RGPD3-201ENST00000304514 XCL1P47992 114 aa4.92□□□□□ -1.62
RGPD3-201ENST00000304514 POLQO75417 2590 aa4.92□□□□□ -1.62
RGPD3-201ENST00000304514 PAX4O43316 350 aa4.92□□□□□ -1.62
RGPD3-201ENST00000304514 A0A1B0GV72 72 aa4.92□□□□□ -1.62
RGPD3-201ENST00000304514 COX17Q14061 63 aa4.92□□□□□ -1.62
RGPD3-201ENST00000304514 DEFB4AO15263 64 aa4.92□□□□□ -1.62
RGPD3-201ENST00000304514 LINC00158P58513 81 aa4.92□□□□□ -1.62
RGPD3-201ENST00000304514 TOMM7Q9P0U1 55 aa4.92□□□□□ -1.62
RGPD3-201ENST00000304514 CSMD3Q7Z407 3707 aa4.92□□□□□ -1.62
RGPD3-201ENST00000304514 NHLRC4P0CG21 123 aaPredicted RBP4.92□□□□□ -1.62
RGPD3-201ENST00000304514 NANOS2P60321 138 aaKnown RBP4.92□□□□□ -1.62
RGPD3-201ENST00000304514 CLPSL2Q6UWE3 100 aa4.92□□□□□ -1.62
RGPD3-201ENST00000304514 CD164L2Q6UWJ8 174 aa4.92□□□□□ -1.62
RGPD3-201ENST00000304514 LINC00269Q8N2A0 174 aa4.92□□□□□ -1.62
RGPD3-201ENST00000304514 MIFP14174 115 aa4.91□□□□□ -1.62
RGPD3-201ENST00000304514 C11orf68Q9H3H3 251 aaKnown RBP4.91□□□□□ -1.62
RGPD3-201ENST00000304514 NF1P21359 2839 aa4.91□□□□□ -1.62
RGPD3-201ENST00000304514 TRBV7-7A0A0K0K1E9 115 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms