RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 USP17L23D6RBM5 183 aa10.18□□□□□ -0.78
PRKCB-201ENST00000303531 KPRPQ5T749 579 aaPredicted RBP10.18□□□□□ -0.78
PRKCB-201ENST00000303531 SHISA2Q6UWI4 295 aa10.18□□□□□ -0.78
PRKCB-201ENST00000303531 IGIPA6NJ69 53 aa10.17□□□□□ -0.78
PRKCB-201ENST00000303531 CLUHP3Q96NS8 147 aa10.17□□□□□ -0.78
PRKCB-201ENST00000303531 LELP1Q5T871 98 aa10.17□□□□□ -0.78
PRKCB-201ENST00000303531 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.17□□□□□ -0.78
PRKCB-201ENST00000303531 TRAV10A0A0B4J240 114 aa10.16□□□□□ -0.78
PRKCB-201ENST00000303531 UBE2D3P61077 147 aa10.16□□□□□ -0.78
PRKCB-201ENST00000303531 UBE2D2P62837 147 aa10.16□□□□□ -0.78
PRKCB-201ENST00000303531 KIR2DL5BQ8NHK3 375 aa10.16□□□□□ -0.78
PRKCB-201ENST00000303531 M0R378 163 aa10.16□□□□□ -0.78
PRKCB-201ENST00000303531 CDC42SE2Q9NRR3 84 aa10.16□□□□□ -0.78
PRKCB-201ENST00000303531 AVPP01185 164 aa10.16□□□□□ -0.78
PRKCB-201ENST00000303531 LRP4O75096 1905 aa10.16□□□□□ -0.78
PRKCB-201ENST00000303531 SVIPQ8NHG7 77 aa10.15□□□□□ -0.79
PRKCB-201ENST00000303531 SPTSSBQ8NFR3 76 aa10.14□□□□□ -0.79
PRKCB-201ENST00000303531 XGP55808 180 aa10.14□□□□□ -0.79
PRKCB-201ENST00000303531 IMUPQ9GZP8 106 aa10.14□□□□□ -0.79
PRKCB-201ENST00000303531 CASC2Q6XLA1 102 aa10.14□□□□□ -0.79
PRKCB-201ENST00000303531 IGLV4-69A0A075B6H9 119 aa10.13□□□□□ -0.79
PRKCB-201ENST00000303531 ZFYVE26Q68DK2 2539 aa10.13□□□□□ -0.79
PRKCB-201ENST00000303531 SERP2Q8N6R1 65 aa10.13□□□□□ -0.79
PRKCB-201ENST00000303531 PPDPFQ9H3Y8 114 aa10.13□□□□□ -0.79
PRKCB-201ENST00000303531 COX17Q14061 63 aa10.13□□□□□ -0.79
PRKCB-201ENST00000303531 DHRS4-AS1Q9P1J3 65 aa10.13□□□□□ -0.79
PRKCB-201ENST00000303531 PTPRSQ13332 1948 aa10.13□□□□□ -0.79
PRKCB-201ENST00000303531 NDUFA7O95182 113 aa10.12□□□□□ -0.79
PRKCB-201ENST00000303531 Q8IZM0 81 aa10.12□□□□□ -0.79
PRKCB-201ENST00000303531 LINC00242Q5T6M2 205 aa10.12□□□□□ -0.79
PRKCB-201ENST00000303531 SNURFQ9Y675 71 aa10.12□□□□□ -0.79
PRKCB-201ENST00000303531 RPL37AP8A6NKH3 93 aa10.12□□□□□ -0.79
PRKCB-201ENST00000303531 IGLV2-18A0A075B6J9 118 aa10.12□□□□□ -0.79
PRKCB-201ENST00000303531 MRGPRG-AS1Q2M3A8 158 aa10.12□□□□□ -0.79
PRKCB-201ENST00000303531 ZNF73O43830 326 aaPredicted RBP10.11□□□□□ -0.79
PRKCB-201ENST00000303531 ODF3L2Q3SX64 289 aa10.11□□□□□ -0.79
PRKCB-201ENST00000303531 NDUFC2-KCTD14E9PQ53 114 aa10.11□□□□□ -0.79
PRKCB-201ENST00000303531 IGF2RP11717 2491 aa10.1□□□□□ -0.79
PRKCB-201ENST00000303531 CRIP2P52943 208 aaPredicted RBP10.1□□□□□ -0.79
PRKCB-201ENST00000303531 WFDC13Q8IUB5 93 aa10.09□□□□□ -0.79
PRKCB-201ENST00000303531 CYSRT1A8MQ03 144 aa10.09□□□□□ -0.79
PRKCB-201ENST00000303531 FAM19A3Q7Z5A8 133 aa10.09□□□□□ -0.79
PRKCB-201ENST00000303531 A0A0J9YWU9 116 aa10.09□□□□□ -0.79
PRKCB-201ENST00000303531 CCDC179H3BU77 68 aa10.09□□□□□ -0.79
PRKCB-201ENST00000303531 TLN1Q9Y490 2541 aaKnown RBP10.09□□□□□ -0.79
PRKCB-201ENST00000303531 NCOR2Q9Y618 2525 aa10.08□□□□□ -0.8
PRKCB-201ENST00000303531 SMIM1B2RUZ4 78 aa10.08□□□□□ -0.8
PRKCB-201ENST00000303531 TET2Q6N021 2002 aaPredicted RBP10.08□□□□□ -0.8
PRKCB-201ENST00000303531 LOC107984640A0A0U1RRK4 108 aa10.08□□□□□ -0.8
PRKCB-201ENST00000303531 CHCHD7Q9BUK0 85 aa10.08□□□□□ -0.8
PRKCB-201ENST00000303531 AGRNO00468 2067 aa10.07□□□□□ -0.8
PRKCB-201ENST00000303531 TSPEAR-AS2P59090 65 aa10.07□□□□□ -0.8
PRKCB-201ENST00000303531 COX7CP15954 63 aa10.07□□□□□ -0.8
PRKCB-201ENST00000303531 NANOS2P60321 138 aaKnown RBP10.07□□□□□ -0.8
PRKCB-201ENST00000303531 COX6A2Q02221 97 aa10.07□□□□□ -0.8
PRKCB-201ENST00000303531 SPINK6Q6UWN8 80 aa10.07□□□□□ -0.8
PRKCB-201ENST00000303531 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.07□□□□□ -0.8
PRKCB-201ENST00000303531 NDUFC1O43677 76 aa10.06□□□□□ -0.8
PRKCB-201ENST00000303531 M0R2N4 97 aa10.06□□□□□ -0.8
PRKCB-201ENST00000303531 HRCT1Q6UXD1 115 aa10.06□□□□□ -0.8
PRKCB-201ENST00000303531 FAM240AA0A1B0GVK7 77 aa10.06□□□□□ -0.8
PRKCB-201ENST00000303531 C7orf33Q8WU49 177 aa10.06□□□□□ -0.8
PRKCB-201ENST00000303531 IGHV4-30-4P0DP06 118 aa10.05□□□□□ -0.8
PRKCB-201ENST00000303531 UNQ6190/PRO20217Q6UXQ8 127 aa10.05□□□□□ -0.8
PRKCB-201ENST00000303531 TLN2Q9Y4G6 2542 aa10.05□□□□□ -0.8
PRKCB-201ENST00000303531 MUC4Q99102 2169 aa10.05□□□□□ -0.8
PRKCB-201ENST00000303531 CPAMD8Q8IZJ3 1885 aa10.05□□□□□ -0.8
PRKCB-201ENST00000303531 MUC7Q8TAX7 377 aa10.05□□□□□ -0.8
PRKCB-201ENST00000303531 Q6JHZ5 121 aa10.04□□□□□ -0.8
PRKCB-201ENST00000303531 LINC00694P0DN24 101 aa10.04□□□□□ -0.8
PRKCB-201ENST00000303531 ATP5EP56381 51 aaPredicted RBP10.04□□□□□ -0.8
PRKCB-201ENST00000303531 OXLD1Q5BKU9 147 aa10.04□□□□□ -0.8
PRKCB-201ENST00000303531 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
PRKCB-201ENST00000303531 RAI1Q7Z5J4 1906 aaPredicted RBP10.04□□□□□ -0.8
PRKCB-201ENST00000303531 COX8CQ7Z4L0 72 aa10.04□□□□□ -0.8
PRKCB-201ENST00000303531 A0A096LNJ9 63 aa10.03□□□□□ -0.8
PRKCB-201ENST00000303531 A0A0U1RQV1 116 aa10.03□□□□□ -0.8
PRKCB-201ENST00000303531 PRR4Q16378 134 aa10.03□□□□□ -0.8
PRKCB-201ENST00000303531 NTM-AS1Q6ZSK4 140 aa10.03□□□□□ -0.8
PRKCB-201ENST00000303531 ZNF706Q9Y5V0 76 aaPredicted RBP10.03□□□□□ -0.8
PRKCB-201ENST00000303531 IGLV4-60A0A075B6I1 120 aa10.03□□□□□ -0.8
PRKCB-201ENST00000303531 KRTAP10-9P60411 292 aa10.03□□□□□ -0.8
PRKCB-201ENST00000303531 EXPH5Q8NEV8 1989 aa10.02□□□□□ -0.8
PRKCB-201ENST00000303531 ZNF580Q9UK33 172 aa10.02□□□□□ -0.81
PRKCB-201ENST00000303531 ADAMTSL4-AS1Q5T5F5 129 aa10.02□□□□□ -0.81
PRKCB-201ENST00000303531 SMR3AQ99954 134 aa10.02□□□□□ -0.81
PRKCB-201ENST00000303531 A0A1W2PPR1 153 aa10.02□□□□□ -0.81
PRKCB-201ENST00000303531 IGLV9-49A0A0B4J1Y8 123 aa10.01□□□□□ -0.81
PRKCB-201ENST00000303531 PLAC8L1A1L4L8 177 aa10.01□□□□□ -0.81
PRKCB-201ENST00000303531 Q8N814 137 aa10.01□□□□□ -0.81
PRKCB-201ENST00000303531 FAM30AQ9NZY2 134 aa10.01□□□□□ -0.81
PRKCB-201ENST00000303531 IGLV1-51P01701 117 aa10.01□□□□□ -0.81
PRKCB-201ENST00000303531 RPL28P46779 137 aaKnown RBP10.01□□□□□ -0.81
PRKCB-201ENST00000303531 FN1P02751 2386 aaKnown RBP10.01□□□□□ -0.81
PRKCB-201ENST00000303531 PRR3P79522 188 aaKnown RBP10.01□□□□□ -0.81
PRKCB-201ENST00000303531 AMELXQ99217 191 aa10.01□□□□□ -0.81
PRKCB-201ENST00000303531 A0A087WYN8 130 aa10□□□□□ -0.81
PRKCB-201ENST00000303531 TRBV10-3A0A0K0K1G6 114 aa10□□□□□ -0.81
PRKCB-201ENST00000303531 V9GYY9 64 aa9.99□□□□□ -0.81
PRKCB-201ENST00000303531 FHL2Q14192 279 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms