RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 C5orf42Q9H799 3197 aa15.18■□□□□ 0.02
LTBP3-201ENST00000301873 NDUFB1O75438 58 aa15.17■□□□□ 0.02
LTBP3-201ENST00000301873 NDUFA7O95182 113 aa15.17■□□□□ 0.02
LTBP3-201ENST00000301873 RNF183Q96D59 192 aa15.17■□□□□ 0.02
LTBP3-201ENST00000301873 HECTD1Q9ULT8 2610 aa15.17■□□□□ 0.02
LTBP3-201ENST00000301873 SMR3AQ99954 134 aa15.16■□□□□ 0.02
LTBP3-201ENST00000301873 SDIM1Q6ZPB5 146 aa15.16■□□□□ 0.02
LTBP3-201ENST00000301873 H3BQ85 93 aa15.15■□□□□ 0.02
LTBP3-201ENST00000301873 HILS1P60008 231 aa15.15■□□□□ 0.02
LTBP3-201ENST00000301873 PDE6GP18545 87 aa15.14■□□□□ 0.01
LTBP3-201ENST00000301873 RAI1Q7Z5J4 1906 aaPredicted RBP15.13■□□□□ 0.01
LTBP3-201ENST00000301873 TMEM258P61165 79 aa15.13■□□□□ 0.01
LTBP3-201ENST00000301873 LINC00959A0A1B0GUT2 108 aa15.12■□□□□ 0.01
LTBP3-201ENST00000301873 PKIGQ9Y2B9 76 aa15.12■□□□□ 0.01
LTBP3-201ENST00000301873 A0A096LNJ9 63 aa15.12■□□□□ 0.01
LTBP3-201ENST00000301873 KLK5Q9Y337 293 aaPredicted RBP15.12■□□□□ 0.01
LTBP3-201ENST00000301873 UBE2D1P51668 147 aa15.12■□□□□ 0.01
LTBP3-201ENST00000301873 SCXQ7RTU7 201 aa15.12■□□□□ 0.01
LTBP3-201ENST00000301873 CHD7Q9P2D1 2997 aa15.11■□□□□ 0.01
LTBP3-201ENST00000301873 MP68P56378 58 aa15.11■□□□□ 0.01
LTBP3-201ENST00000301873 LAMA2P24043 3122 aaKnown RBP15.11■□□□□ 0.01
LTBP3-201ENST00000301873 MRPS36P82909 103 aaKnown RBP15.11■□□□□ 0.01
LTBP3-201ENST00000301873 CD164L2Q6UWJ8 174 aa15.11■□□□□ 0.01
LTBP3-201ENST00000301873 BPY2O14599 106 aa15.1■□□□□ 0.01
LTBP3-201ENST00000301873 NDUFV3P56181 108 aaKnown RBP15.1■□□□□ 0.01
LTBP3-201ENST00000301873 OXLD1Q5BKU9 147 aa15.1■□□□□ 0.01
LTBP3-201ENST00000301873 MRGPRG-AS1Q2M3A8 158 aa15.1■□□□□ 0.01
LTBP3-201ENST00000301873 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.1■□□□□ 0.01
LTBP3-201ENST00000301873 SYCNQ0VAF6 134 aa15.1■□□□□ 0.01
LTBP3-201ENST00000301873 CDC42SE2Q9NRR3 84 aa15.1■□□□□ 0.01
LTBP3-201ENST00000301873 LINC00242Q5T6M2 205 aa15.09■□□□□ 0.01
LTBP3-201ENST00000301873 KPRPQ5T749 579 aaPredicted RBP15.09■□□□□ 0.01
LTBP3-201ENST00000301873 UBE2D3P61077 147 aa15.09■□□□□ 0.01
LTBP3-201ENST00000301873 UBE2D2P62837 147 aa15.09■□□□□ 0.01
LTBP3-201ENST00000301873 CRIP2P52943 208 aaPredicted RBP15.09■□□□□ 0.01
LTBP3-201ENST00000301873 C20orf197Q8N268 126 aa15.08■□□□□ 0
LTBP3-201ENST00000301873 TIMM17BO60830 172 aa15.08■□□□□ 0
LTBP3-201ENST00000301873 Q6ZQY7 126 aa15.07■□□□□ 0
LTBP3-201ENST00000301873 UPK3BQ9BT76 320 aa15.07■□□□□ 0
LTBP3-201ENST00000301873 CLUHP3Q96NS8 147 aa15.07■□□□□ 0
LTBP3-201ENST00000301873 ADAMTS20P59510 1910 aa15.06■□□□□ 0
LTBP3-201ENST00000301873 H0Y9J4 135 aa15.06■□□□□ 0
LTBP3-201ENST00000301873 SHISA2Q6UWI4 295 aa15.06■□□□□ 0
LTBP3-201ENST00000301873 WFDC9Q8NEX5 89 aa15.06■□□□□ 0
LTBP3-201ENST00000301873 SPATA25Q9BR10 227 aa15.06■□□□□ 0
LTBP3-201ENST00000301873 LST1O00453 97 aa15.06■□□□□ 0
LTBP3-201ENST00000301873 C5orf47Q569G3 176 aa15.06■□□□□ 0
LTBP3-201ENST00000301873 IGKV2-28A0A075B6P5 120 aa15.05■□□□□ 0
LTBP3-201ENST00000301873 IGKV2D-28P01615 120 aa15.05■□□□□ 0
LTBP3-201ENST00000301873 COX8CQ7Z4L0 72 aa15.04■□□□□ -0
LTBP3-201ENST00000301873 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.04■□□□□ -0
LTBP3-201ENST00000301873 LAMA3Q16787 3333 aa15.04■□□□□ -0
LTBP3-201ENST00000301873 ZNF580Q9UK33 172 aa15.04■□□□□ -0
LTBP3-201ENST00000301873 FAM19A5Q7Z5A7 132 aaPredicted RBP15.03■□□□□ -0
LTBP3-201ENST00000301873 SMIM11BQ8TCY0 68 aa15.03■□□□□ -0
LTBP3-201ENST00000301873 C1orf158Q8N1D5 194 aa15.03■□□□□ -0
LTBP3-201ENST00000301873 ENHOQ6UWT2 76 aa15.03■□□□□ -0
LTBP3-201ENST00000301873 FAM19A1Q7Z5A9 133 aa15.03■□□□□ -0
LTBP3-201ENST00000301873 A0A087WZ39 114 aa15.02■□□□□ -0
LTBP3-201ENST00000301873 LINC00694P0DN24 101 aa15.02□□□□□ -0.01
LTBP3-201ENST00000301873 TSPEAR-AS2P59090 65 aa15.02□□□□□ -0.01
LTBP3-201ENST00000301873 LELP1Q5T871 98 aa15.01□□□□□ -0.01
LTBP3-201ENST00000301873 IGLV4-69A0A075B6H9 119 aa15.01□□□□□ -0.01
LTBP3-201ENST00000301873 CCKP06307 115 aa15□□□□□ -0.01
LTBP3-201ENST00000301873 KIR2DL5BQ8NHK3 375 aa15□□□□□ -0.01
LTBP3-201ENST00000301873 IGLV2-18A0A075B6J9 118 aa14.99□□□□□ -0.01
LTBP3-201ENST00000301873 IGHV4-30-4P0DP06 118 aa14.99□□□□□ -0.01
LTBP3-201ENST00000301873 IGLV1-51P01701 117 aa14.99□□□□□ -0.01
LTBP3-201ENST00000301873 MKI67P46013 3256 aaKnown RBP14.98□□□□□ -0.01
LTBP3-201ENST00000301873 SMIM1B2RUZ4 78 aa14.98□□□□□ -0.01
LTBP3-201ENST00000301873 IGLV4-60A0A075B6I1 120 aa14.97□□□□□ -0.01
LTBP3-201ENST00000301873 XGP55808 180 aa14.97□□□□□ -0.01
LTBP3-201ENST00000301873 C14orf177Q52M58 125 aa14.97□□□□□ -0.01
LTBP3-201ENST00000301873 COL5A1P20908 1838 aaPredicted RBP14.97□□□□□ -0.01
LTBP3-201ENST00000301873 J3KT08 172 aa14.97□□□□□ -0.01
LTBP3-201ENST00000301873 CYSRT1A8MQ03 144 aa14.97□□□□□ -0.01
LTBP3-201ENST00000301873 UNQ6190/PRO20217Q6UXQ8 127 aa14.97□□□□□ -0.01
LTBP3-201ENST00000301873 B9D2Q9BPU9 175 aa14.97□□□□□ -0.01
LTBP3-201ENST00000301873 C3orf84H3BNL1 204 aa14.96□□□□□ -0.01
LTBP3-201ENST00000301873 COX6A2Q02221 97 aa14.96□□□□□ -0.02
LTBP3-201ENST00000301873 CHCHD7Q9BUK0 85 aa14.96□□□□□ -0.02
LTBP3-201ENST00000301873 C4orf48Q5BLP8 95 aa14.95□□□□□ -0.02
LTBP3-201ENST00000301873 TRAV10A0A0B4J240 114 aa14.95□□□□□ -0.02
LTBP3-201ENST00000301873 C9orf116Q5BN46 136 aaPredicted RBP14.95□□□□□ -0.02
LTBP3-201ENST00000301873 Q6ZSN1 163 aa14.95□□□□□ -0.02
LTBP3-201ENST00000301873 CFAP54Q96N23 3096 aa14.94□□□□□ -0.02
LTBP3-201ENST00000301873 UQCRQO14949 82 aa14.94□□□□□ -0.02
LTBP3-201ENST00000301873 ADAMTSL4-AS1Q5T5F5 129 aa14.93□□□□□ -0.02
LTBP3-201ENST00000301873 PLA2G2AP14555 144 aa14.93□□□□□ -0.02
LTBP3-201ENST00000301873 NANOS2P60321 138 aaKnown RBP14.93□□□□□ -0.02
LTBP3-201ENST00000301873 BRI3O95415 125 aa14.92□□□□□ -0.02
LTBP3-201ENST00000301873 Q8IZM0 81 aa14.92□□□□□ -0.02
LTBP3-201ENST00000301873 LRCOL1A6NCL2 159 aa14.91□□□□□ -0.02
LTBP3-201ENST00000301873 PRR3P79522 188 aaKnown RBP14.91□□□□□ -0.02
LTBP3-201ENST00000301873 PTPRBP23467 1997 aa14.91□□□□□ -0.02
LTBP3-201ENST00000301873 PPDPFQ9H3Y8 114 aa14.91□□□□□ -0.02
LTBP3-201ENST00000301873 RPL37AP8A6NKH3 93 aa14.9□□□□□ -0.02
LTBP3-201ENST00000301873 COL4A2P08572 1712 aa14.9□□□□□ -0.02
LTBP3-201ENST00000301873 RETNQ9HD89 108 aa14.89□□□□□ -0.03
LTBP3-201ENST00000301873 A0A0J9YWU9 116 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms