RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 A0A087WYN8 130 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 F5H768 121 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 RPL18AQ02543 176 aaKnown RBP7.78□□□□□ -1.16
ZNF558-201ENST00000301475 KIR2DL5BQ8NHK3 375 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 COPS9Q8WXC6 57 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 NOTCH3Q9UM47 2321 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 RPL28P46779 137 aaKnown RBP7.78□□□□□ -1.16
ZNF558-201ENST00000301475 DEFB131AP59861 70 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 ZNF415Q09FC8 603 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 C11orf72Q8NBR9 251 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 HECTD1Q9ULT8 2610 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 MYO9AB2RTY4 2548 aa7.77□□□□□ -1.16
ZNF558-201ENST00000301475 DNAL4O96015 105 aa7.77□□□□□ -1.17
ZNF558-201ENST00000301475 Q96MF0 132 aa7.77□□□□□ -1.17
ZNF558-201ENST00000301475 APCP25054 2843 aa7.77□□□□□ -1.17
ZNF558-201ENST00000301475 IGKV2-28A0A075B6P5 120 aa7.77□□□□□ -1.17
ZNF558-201ENST00000301475 IGKV2D-28P01615 120 aa7.77□□□□□ -1.17
ZNF558-201ENST00000301475 LINC00846Q9NV44 126 aa7.77□□□□□ -1.17
ZNF558-201ENST00000301475 FAM19A3Q7Z5A8 133 aa7.76□□□□□ -1.17
ZNF558-201ENST00000301475 ITPR2Q14571 2701 aa7.76□□□□□ -1.17
ZNF558-201ENST00000301475 ACANP16112 2415 aa7.76□□□□□ -1.17
ZNF558-201ENST00000301475 TEX15Q9BXT5 2789 aa7.76□□□□□ -1.17
ZNF558-201ENST00000301475 OXTP01178 125 aa7.76□□□□□ -1.17
ZNF558-201ENST00000301475 CRPP02741 224 aa7.76□□□□□ -1.17
ZNF558-201ENST00000301475 UPK3BQ9BT76 320 aa7.76□□□□□ -1.17
ZNF558-201ENST00000301475 ZNF469Q96JG9 3925 aaPredicted RBP7.75□□□□□ -1.17
ZNF558-201ENST00000301475 RPS28P62857 69 aaKnown RBP7.75□□□□□ -1.17
ZNF558-201ENST00000301475 CCL19Q99731 98 aa7.75□□□□□ -1.17
ZNF558-201ENST00000301475 A8MTW9 85 aa7.75□□□□□ -1.17
ZNF558-201ENST00000301475 AVPP01185 164 aa7.75□□□□□ -1.17
ZNF558-201ENST00000301475 NTM-AS1Q6ZSK4 140 aa7.75□□□□□ -1.17
ZNF558-201ENST00000301475 LINC01561Q8N1V8 128 aa7.75□□□□□ -1.17
ZNF558-201ENST00000301475 ZNF843Q8N446 348 aa7.75□□□□□ -1.17
ZNF558-201ENST00000301475 MXRA5Q9NR99 2828 aa7.75□□□□□ -1.17
ZNF558-201ENST00000301475 TRAV13-2A0A0B4J235 113 aa7.74□□□□□ -1.17
ZNF558-201ENST00000301475 TMEM89A2RUT3 159 aa7.74□□□□□ -1.17
ZNF558-201ENST00000301475 Q6JHZ5 121 aa7.74□□□□□ -1.17
ZNF558-201ENST00000301475 SMIM11BQ8TCY0 68 aa7.74□□□□□ -1.17
ZNF558-201ENST00000301475 MIR7-3HGQ8N6C7 128 aa7.74□□□□□ -1.17
ZNF558-201ENST00000301475 MTORP42345 2549 aa7.74□□□□□ -1.17
ZNF558-201ENST00000301475 IGHV4-59P01825 116 aa7.73□□□□□ -1.17
ZNF558-201ENST00000301475 SERP2Q8N6R1 65 aa7.73□□□□□ -1.17
ZNF558-201ENST00000301475 DPH3Q96FX2 82 aa7.73□□□□□ -1.17
ZNF558-201ENST00000301475 OBSCN-AS1Q96MR7 158 aa7.73□□□□□ -1.17
ZNF558-201ENST00000301475 DSCR8Q96T75 97 aa7.73□□□□□ -1.17
ZNF558-201ENST00000301475 AKAP9Q99996 3911 aa7.73□□□□□ -1.17
ZNF558-201ENST00000301475 PF4P02776 101 aa7.73□□□□□ -1.17
ZNF558-201ENST00000301475 SND1-IT1Q9HBX3 110 aa7.73□□□□□ -1.17
ZNF558-201ENST00000301475 CDC42SE2Q9NRR3 84 aa7.73□□□□□ -1.17
ZNF558-201ENST00000301475 NCR3O14931 201 aa7.72□□□□□ -1.17
ZNF558-201ENST00000301475 TMEM258P61165 79 aa7.72□□□□□ -1.17
ZNF558-201ENST00000301475 USP17L23D6RBM5 183 aa7.72□□□□□ -1.17
ZNF558-201ENST00000301475 MAPK1IP1LQ8NDC0 245 aa7.72□□□□□ -1.17
ZNF558-201ENST00000301475 OR13C6PQ8NH95 151 aa7.71□□□□□ -1.17
ZNF558-201ENST00000301475 GCN1Q92616 2671 aaKnown RBP7.71□□□□□ -1.17
ZNF558-201ENST00000301475 LECT2O14960 151 aa7.71□□□□□ -1.18
ZNF558-201ENST00000301475 DEFB136Q30KP8 78 aa7.7□□□□□ -1.18
ZNF558-201ENST00000301475 FLNAP21333 2647 aaKnown RBP7.7□□□□□ -1.18
ZNF558-201ENST00000301475 SLPIP03973 132 aa7.7□□□□□ -1.18
ZNF558-201ENST00000301475 SLURP1P55000 103 aa7.7□□□□□ -1.18
ZNF558-201ENST00000301475 SS18Q15532 418 aa7.7□□□□□ -1.18
ZNF558-201ENST00000301475 C10orf105Q8TEF2 133 aa7.7□□□□□ -1.18
ZNF558-201ENST00000301475 OVOL2Q9BRP0 275 aa7.7□□□□□ -1.18
ZNF558-201ENST00000301475 NF1P21359 2839 aa7.7□□□□□ -1.18
ZNF558-201ENST00000301475 IGHV4-30-2A0A087WSY4 118 aa7.7□□□□□ -1.18
ZNF558-201ENST00000301475 CCL18P55774 89 aa7.7□□□□□ -1.18
ZNF558-201ENST00000301475 C18orf65Q6ZTR6 163 aa7.7□□□□□ -1.18
ZNF558-201ENST00000301475 MSMBP08118 114 aa7.69□□□□□ -1.18
ZNF558-201ENST00000301475 TOMM7Q9P0U1 55 aa7.69□□□□□ -1.18
ZNF558-201ENST00000301475 JMJD1CQ15652 2540 aa7.69□□□□□ -1.18
ZNF558-201ENST00000301475 ITPR3Q14573 2671 aa7.68□□□□□ -1.18
ZNF558-201ENST00000301475 HILS1P60008 231 aa7.68□□□□□ -1.18
ZNF558-201ENST00000301475 DEFB112Q30KQ8 113 aa7.68□□□□□ -1.18
ZNF558-201ENST00000301475 COX7B2Q8TF08 81 aa7.68□□□□□ -1.18
ZNF558-201ENST00000301475 MAP6D1Q9H9H5 199 aa7.68□□□□□ -1.18
ZNF558-201ENST00000301475 TRGV1A0A0A0MS02 117 aa7.68□□□□□ -1.18
ZNF558-201ENST00000301475 K7EQD1 137 aa7.68□□□□□ -1.18
ZNF558-201ENST00000301475 INSP01308 110 aa7.68□□□□□ -1.18
ZNF558-201ENST00000301475 LINC00158P58513 81 aa7.68□□□□□ -1.18
ZNF558-201ENST00000301475 RPL36AP83881 106 aaKnown RBP7.68□□□□□ -1.18
ZNF558-201ENST00000301475 RPL36ALQ969Q0 106 aaKnown RBP7.68□□□□□ -1.18
ZNF558-201ENST00000301475 KRTAP10-9P60411 292 aa7.67□□□□□ -1.18
ZNF558-201ENST00000301475 FHL2Q14192 279 aa7.67□□□□□ -1.18
ZNF558-201ENST00000301475 C4orf26Q17RF5 130 aa7.67□□□□□ -1.18
ZNF558-201ENST00000301475 XCL2Q9UBD3 114 aa7.67□□□□□ -1.18
ZNF558-201ENST00000301475 WNK1Q9H4A3 2382 aa7.67□□□□□ -1.18
ZNF558-201ENST00000301475 UNC79Q9P2D8 2635 aa7.67□□□□□ -1.18
ZNF558-201ENST00000301475 H0YGX0 51 aa7.67□□□□□ -1.18
ZNF558-201ENST00000301475 NIPBLQ6KC79 2804 aaeCLIP7.66□□□□□ -1.18
ZNF558-201ENST00000301475 Q5XG85 94 aa7.66□□□□□ -1.18
ZNF558-201ENST00000301475 Q6ZTI0 123 aa7.66□□□□□ -1.18
ZNF558-201ENST00000301475 WFDC9Q8NEX5 89 aa7.66□□□□□ -1.18
ZNF558-201ENST00000301475 IGKV3OR2-268A0A0C4DH90 116 aa7.66□□□□□ -1.18
ZNF558-201ENST00000301475 IL17DQ8TAD2 202 aa7.66□□□□□ -1.18
ZNF558-201ENST00000301475 UBE2E2Q96LR5 201 aa7.65□□□□□ -1.18
ZNF558-201ENST00000301475 FLNBO75369 2602 aaKnown RBP7.65□□□□□ -1.18
ZNF558-201ENST00000301475 WIPF1O43516 503 aa7.65□□□□□ -1.18
ZNF558-201ENST00000301475 TRBV10-1A0A0K0K1A3 114 aa7.65□□□□□ -1.19
ZNF558-201ENST00000301475 PFN2P35080 140 aa7.65□□□□□ -1.19
ZNF558-201ENST00000301475 C1orf158Q8N1D5 194 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms