RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 XGP55808 180 aa8.41□□□□□ -1.06
GCN1-201ENST00000300648 ADORA2A-AS1P86434 159 aa8.41□□□□□ -1.06
GCN1-201ENST00000300648 ZFAND3Q9H8U3 227 aa8.41□□□□□ -1.06
GCN1-201ENST00000300648 IGLV4-69A0A075B6H9 119 aa8.4□□□□□ -1.06
GCN1-201ENST00000300648 ZFP36P26651 326 aaKnown RBP8.4□□□□□ -1.06
GCN1-201ENST00000300648 CEMP1Q6PRD7 247 aaPredicted RBP8.4□□□□□ -1.06
GCN1-201ENST00000300648 FRMD6-AS1P0C7T7 363 aa8.4□□□□□ -1.06
GCN1-201ENST00000300648 SNURFQ9Y675 71 aa8.4□□□□□ -1.06
GCN1-201ENST00000300648 OXLD1Q5BKU9 147 aa8.4□□□□□ -1.07
GCN1-201ENST00000300648 C3orf84H3BNL1 204 aa8.39□□□□□ -1.07
GCN1-201ENST00000300648 TSHBP01222 138 aa8.39□□□□□ -1.07
GCN1-201ENST00000300648 Q6ZQY7 126 aa8.39□□□□□ -1.07
GCN1-201ENST00000300648 CHCHD7Q9BUK0 85 aa8.39□□□□□ -1.07
GCN1-201ENST00000300648 WFDC10AQ9H1F0 79 aa8.39□□□□□ -1.07
GCN1-201ENST00000300648 KLLNB2CW77 178 aa8.39□□□□□ -1.07
GCN1-201ENST00000300648 DEFB114Q30KQ6 69 aa8.39□□□□□ -1.07
GCN1-201ENST00000300648 FASNP49327 2511 aaKnown RBP8.39□□□□□ -1.07
GCN1-201ENST00000300648 LOC107984640A0A0U1RRK4 108 aa8.39□□□□□ -1.07
GCN1-201ENST00000300648 IGLV2-11P01706 119 aa8.39□□□□□ -1.07
GCN1-201ENST00000300648 MAPKAPK5-AS1Q8N8E1 139 aa8.39□□□□□ -1.07
GCN1-201ENST00000300648 PRYO14603 147 aa8.39□□□□□ -1.07
GCN1-201ENST00000300648 UBE2D1P51668 147 aa8.38□□□□□ -1.07
GCN1-201ENST00000300648 RPL28P46779 137 aaKnown RBP8.38□□□□□ -1.07
GCN1-201ENST00000300648 LELP1Q5T871 98 aa8.38□□□□□ -1.07
GCN1-201ENST00000300648 NTM-AS1Q6ZSK4 140 aa8.38□□□□□ -1.07
GCN1-201ENST00000300648 C10orf25Q5T742 122 aa8.38□□□□□ -1.07
GCN1-201ENST00000300648 CXCL6P80162 114 aa8.38□□□□□ -1.07
GCN1-201ENST00000300648 IGKV2-24A0A0C4DH68 120 aa8.38□□□□□ -1.07
GCN1-201ENST00000300648 SMIM11BQ8TCY0 68 aa8.37□□□□□ -1.07
GCN1-201ENST00000300648 DNAJC9-AS1A6NH13 148 aa8.37□□□□□ -1.07
GCN1-201ENST00000300648 ZNF295-AS1Q8N0V1 137 aa8.37□□□□□ -1.07
GCN1-201ENST00000300648 TP53TG3Q9ULZ0 132 aa8.37□□□□□ -1.07
GCN1-201ENST00000300648 SHISA2Q6UWI4 295 aa8.37□□□□□ -1.07
GCN1-201ENST00000300648 POLR2KP53803 58 aaKnown RBP8.37□□□□□ -1.07
GCN1-201ENST00000300648 SCXQ7RTU7 201 aa8.36□□□□□ -1.07
GCN1-201ENST00000300648 SLPIP03973 132 aa8.36□□□□□ -1.07
GCN1-201ENST00000300648 Q6YL49 198 aa8.36□□□□□ -1.07
GCN1-201ENST00000300648 ZNF580Q9UK33 172 aa8.36□□□□□ -1.07
GCN1-201ENST00000300648 COL4A3Q01955 1670 aa8.35□□□□□ -1.07
GCN1-201ENST00000300648 TRBV10-3A0A0K0K1G6 114 aa8.35□□□□□ -1.07
GCN1-201ENST00000300648 LY6LH3BQJ8 138 aa8.35□□□□□ -1.07
GCN1-201ENST00000300648 DEFB131BA0A096LNP1 70 aa8.35□□□□□ -1.07
GCN1-201ENST00000300648 GRNP28799 593 aaKnown RBP8.35□□□□□ -1.07
GCN1-201ENST00000300648 NANOS2P60321 138 aaKnown RBP8.35□□□□□ -1.07
GCN1-201ENST00000300648 LIMD2Q9BT23 127 aa8.35□□□□□ -1.07
GCN1-201ENST00000300648 Q8N814 137 aa8.34□□□□□ -1.07
GCN1-201ENST00000300648 ESM1Q9NQ30 184 aa8.34□□□□□ -1.07
GCN1-201ENST00000300648 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.07
GCN1-201ENST00000300648 CRIP1P50238 77 aa8.34□□□□□ -1.07
GCN1-201ENST00000300648 A0A1B0GW54 56 aa8.34□□□□□ -1.07
GCN1-201ENST00000300648 LMO4P61968 165 aa8.33□□□□□ -1.08
GCN1-201ENST00000300648 hDV103S1A0JD37 113 aa8.33□□□□□ -1.08
GCN1-201ENST00000300648 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.33□□□□□ -1.08
GCN1-201ENST00000300648 BCE1O60756 84 aa8.32□□□□□ -1.08
GCN1-201ENST00000300648 BRWD1-AS2P59051 145 aa8.32□□□□□ -1.08
GCN1-201ENST00000300648 LINC01561Q8N1V8 128 aa8.32□□□□□ -1.08
GCN1-201ENST00000300648 RNASE3P12724 160 aaKnown RBP8.32□□□□□ -1.08
GCN1-201ENST00000300648 EGFEM1PQ0D2K5 195 aa8.32□□□□□ -1.08
GCN1-201ENST00000300648 Q8N976 141 aa8.32□□□□□ -1.08
GCN1-201ENST00000300648 WFDC13Q8IUB5 93 aa8.32□□□□□ -1.08
GCN1-201ENST00000300648 BRI3O95415 125 aa8.31□□□□□ -1.08
GCN1-201ENST00000300648 RPS28P62857 69 aaKnown RBP8.31□□□□□ -1.08
GCN1-201ENST00000300648 PSMG3-AS1Q96PY0 264 aa8.31□□□□□ -1.08
GCN1-201ENST00000300648 ACANP16112 2415 aa8.31□□□□□ -1.08
GCN1-201ENST00000300648 XAGE1AQ9HD64 81 aa8.31□□□□□ -1.08
GCN1-201ENST00000300648 IGIPA6NJ69 53 aa8.31□□□□□ -1.08
GCN1-201ENST00000300648 LINC00959A0A1B0GUT2 108 aa8.31□□□□□ -1.08
GCN1-201ENST00000300648 PRR4Q16378 134 aa8.3□□□□□ -1.08
GCN1-201ENST00000300648 TRBV7-6A0A0J9YX20 115 aa8.3□□□□□ -1.08
GCN1-201ENST00000300648 TRBV7-7A0A0K0K1E9 115 aa8.29□□□□□ -1.08
GCN1-201ENST00000300648 DEFB4AO15263 64 aa8.29□□□□□ -1.08
GCN1-201ENST00000300648 COX8CQ7Z4L0 72 aa8.29□□□□□ -1.08
GCN1-201ENST00000300648 CDC42SE2Q9NRR3 84 aa8.29□□□□□ -1.08
GCN1-201ENST00000300648 FAM30AQ9NZY2 134 aa8.29□□□□□ -1.08
GCN1-201ENST00000300648 Q8NA96 180 aa8.29□□□□□ -1.08
GCN1-201ENST00000300648 IGKV2-28A0A075B6P5 120 aa8.28□□□□□ -1.08
GCN1-201ENST00000300648 IGKV2D-28P01615 120 aa8.28□□□□□ -1.08
GCN1-201ENST00000300648 DEFB1P60022 68 aa8.28□□□□□ -1.08
GCN1-201ENST00000300648 C1orf137Q5JT78 98 aa8.28□□□□□ -1.08
GCN1-201ENST00000300648 CELA1Q9UNI1 258 aa8.28□□□□□ -1.08
GCN1-201ENST00000300648 PLA2G5P39877 138 aa8.28□□□□□ -1.08
GCN1-201ENST00000300648 Q6ZVQ6 151 aa8.28□□□□□ -1.08
GCN1-201ENST00000300648 Q8N6K4 173 aa8.27□□□□□ -1.09
GCN1-201ENST00000300648 Q8N3U1 123 aa8.26□□□□□ -1.09
GCN1-201ENST00000300648 PSPHP1O15172 72 aa8.26□□□□□ -1.09
GCN1-201ENST00000300648 DCANP1Q8TF63 244 aa8.26□□□□□ -1.09
GCN1-201ENST00000300648 POLQO75417 2590 aa8.26□□□□□ -1.09
GCN1-201ENST00000300648 TMEM254Q8TBM7 123 aa8.25□□□□□ -1.09
GCN1-201ENST00000300648 ESRGQ1W209 222 aa8.25□□□□□ -1.09
GCN1-201ENST00000300648 C22orf34Q6ZV56 151 aa8.25□□□□□ -1.09
GCN1-201ENST00000300648 IGHV4-31P0DP07 118 aa8.25□□□□□ -1.09
GCN1-201ENST00000300648 REG3GQ6UW15 175 aa8.25□□□□□ -1.09
GCN1-201ENST00000300648 SOSTDC1Q6X4U4 206 aa8.25□□□□□ -1.09
GCN1-201ENST00000300648 Q6ZPA2 131 aa8.25□□□□□ -1.09
GCN1-201ENST00000300648 TP53AIP1Q9HCN2 124 aa8.25□□□□□ -1.09
GCN1-201ENST00000300648 KPRPQ5T749 579 aaPredicted RBP8.24□□□□□ -1.09
GCN1-201ENST00000300648 Q6ZS46 218 aa8.24□□□□□ -1.09
GCN1-201ENST00000300648 LINC00208Q96KT6 92 aa8.24□□□□□ -1.09
GCN1-201ENST00000300648 SMIM1B2RUZ4 78 aa8.23□□□□□ -1.09
GCN1-201ENST00000300648 IGLV1-40P01703 118 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms