RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 H3BT86 120 aa9.7□□□□□ -0.86
CTDP1-202ENST00000299543 Q9HAA7 133 aa9.7□□□□□ -0.86
CTDP1-202ENST00000299543 A0A087WVE0 104 aa9.69□□□□□ -0.86
CTDP1-202ENST00000299543 TRBV30A0A0K0K1B3 111 aa9.69□□□□□ -0.86
CTDP1-202ENST00000299543 SETXQ7Z333 2677 aaKnown RBP9.69□□□□□ -0.86
CTDP1-202ENST00000299543 DAZ2Q13117 558 aaKnown RBP9.69□□□□□ -0.86
CTDP1-202ENST00000299543 DAZ4Q86SG3 579 aaKnown RBP9.69□□□□□ -0.86
CTDP1-202ENST00000299543 C4orf3Q8WVX3 66 aa9.69□□□□□ -0.86
CTDP1-202ENST00000299543 DAZ3Q9NR90 486 aaKnown RBP9.69□□□□□ -0.86
CTDP1-202ENST00000299543 PKIGQ9Y2B9 76 aa9.69□□□□□ -0.86
CTDP1-202ENST00000299543 PYGO1Q9Y3Y4 419 aa9.69□□□□□ -0.86
CTDP1-202ENST00000299543 VSIG2Q96IQ7 327 aa9.69□□□□□ -0.86
CTDP1-202ENST00000299543 CR1P17927 2039 aa9.68□□□□□ -0.86
CTDP1-202ENST00000299543 Q6ZTI0 123 aa9.68□□□□□ -0.86
CTDP1-202ENST00000299543 LINC00526Q96FQ7 95 aa9.68□□□□□ -0.86
CTDP1-202ENST00000299543 RPL35AP18077 110 aaKnown RBP9.68□□□□□ -0.86
CTDP1-202ENST00000299543 ODF3L2Q3SX64 289 aa9.68□□□□□ -0.86
CTDP1-202ENST00000299543 C11orf72Q8NBR9 251 aa9.68□□□□□ -0.86
CTDP1-202ENST00000299543 BAALC-AS2P0C853 105 aa9.67□□□□□ -0.86
CTDP1-202ENST00000299543 COX7CP15954 63 aa9.67□□□□□ -0.86
CTDP1-202ENST00000299543 CIRBPQ14011 172 aaKnown RBP9.67□□□□□ -0.86
CTDP1-202ENST00000299543 WFDC10AQ9H1F0 79 aa9.67□□□□□ -0.86
CTDP1-202ENST00000299543 COX6A2Q02221 97 aa9.67□□□□□ -0.86
CTDP1-202ENST00000299543 FSHBP01225 129 aa9.67□□□□□ -0.86
CTDP1-202ENST00000299543 LRRC75A-AS1Q8N1F1 130 aa9.67□□□□□ -0.86
CTDP1-202ENST00000299543 WFDC11Q8NEX6 87 aa9.67□□□□□ -0.86
CTDP1-202ENST00000299543 NOP10Q9NPE3 64 aaKnown RBP9.67□□□□□ -0.86
CTDP1-202ENST00000299543 LINC00643Q86TS7 51 aa9.66□□□□□ -0.86
CTDP1-202ENST00000299543 ITPR2Q14571 2701 aa9.66□□□□□ -0.86
CTDP1-202ENST00000299543 TINCRA0A1B0GVN0 87 aa9.66□□□□□ -0.86
CTDP1-202ENST00000299543 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.66□□□□□ -0.86
CTDP1-202ENST00000299543 CCL24O00175 119 aa9.66□□□□□ -0.86
CTDP1-202ENST00000299543 Q9H8V8 135 aa9.66□□□□□ -0.86
CTDP1-202ENST00000299543 UBR5O95071 2799 aaPredicted RBP9.65□□□□□ -0.86
CTDP1-202ENST00000299543 LST1O00453 97 aa9.65□□□□□ -0.86
CTDP1-202ENST00000299543 DNAL4O96015 105 aa9.65□□□□□ -0.86
CTDP1-202ENST00000299543 GCN1Q92616 2671 aaKnown RBP9.65□□□□□ -0.86
CTDP1-202ENST00000299543 TRGV2A0A075B6R0 118 aa9.65□□□□□ -0.86
CTDP1-202ENST00000299543 PLA2G2AP14555 144 aa9.65□□□□□ -0.86
CTDP1-202ENST00000299543 C1orf158Q8N1D5 194 aa9.65□□□□□ -0.86
CTDP1-202ENST00000299543 C2orf48Q96LS8 159 aa9.65□□□□□ -0.86
CTDP1-202ENST00000299543 NBPF19A0A087WUL8 3843 aa9.65□□□□□ -0.87
CTDP1-202ENST00000299543 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
CTDP1-202ENST00000299543 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
CTDP1-202ENST00000299543 CITED2Q99967 270 aaPredicted RBP9.64□□□□□ -0.87
CTDP1-202ENST00000299543 ZNF843Q8N446 348 aa9.64□□□□□ -0.87
CTDP1-202ENST00000299543 LITAFQ99732 161 aa9.64□□□□□ -0.87
CTDP1-202ENST00000299543 DNAJC9-AS1A6NH13 148 aa9.63□□□□□ -0.87
CTDP1-202ENST00000299543 RNASE1P07998 156 aaKnown RBP9.63□□□□□ -0.87
CTDP1-202ENST00000299543 MIAQ16674 131 aa9.63□□□□□ -0.87
CTDP1-202ENST00000299543 TOMM7Q9P0U1 55 aa9.62□□□□□ -0.87
CTDP1-202ENST00000299543 UBE2L6O14933 153 aa9.62□□□□□ -0.87
CTDP1-202ENST00000299543 TIRAPP58753 221 aa9.62□□□□□ -0.87
CTDP1-202ENST00000299543 PRIMA1Q86XR5 153 aa9.62□□□□□ -0.87
CTDP1-202ENST00000299543 LOC100131303A0A0U1RQF7 123 aa9.61□□□□□ -0.87
CTDP1-202ENST00000299543 C14orf132Q9NPU4 83 aa9.61□□□□□ -0.87
CTDP1-202ENST00000299543 FAM240AA0A1B0GVK7 77 aa9.61□□□□□ -0.87
CTDP1-202ENST00000299543 DPH3Q96FX2 82 aa9.61□□□□□ -0.87
CTDP1-202ENST00000299543 ATOX1O00244 68 aa9.6□□□□□ -0.87
CTDP1-202ENST00000299543 BEAN1Q3B7T3 259 aa9.6□□□□□ -0.87
CTDP1-202ENST00000299543 LINC00242Q5T6M2 205 aa9.6□□□□□ -0.87
CTDP1-202ENST00000299543 ESM1Q9NQ30 184 aa9.6□□□□□ -0.87
CTDP1-202ENST00000299543 Q8N2B8 174 aa9.6□□□□□ -0.87
CTDP1-202ENST00000299543 WFDC9Q8NEX5 89 aa9.6□□□□□ -0.87
CTDP1-202ENST00000299543 AKAP9Q99996 3911 aa9.59□□□□□ -0.87
CTDP1-202ENST00000299543 A8MTW9 85 aa9.59□□□□□ -0.87
CTDP1-202ENST00000299543 K7EQD1 137 aa9.59□□□□□ -0.87
CTDP1-202ENST00000299543 ACYP1P07311 99 aa9.59□□□□□ -0.87
CTDP1-202ENST00000299543 NTM-AS1Q6ZSK4 140 aa9.59□□□□□ -0.87
CTDP1-202ENST00000299543 FASNP49327 2511 aaKnown RBP9.59□□□□□ -0.87
CTDP1-202ENST00000299543 A0A0U1RQV1 116 aa9.59□□□□□ -0.87
CTDP1-202ENST00000299543 Q5XG85 94 aa9.59□□□□□ -0.87
CTDP1-202ENST00000299543 C9orf129Q5T035 196 aaKnown RBP9.58□□□□□ -0.88
CTDP1-202ENST00000299543 IMUPQ9GZP8 106 aa9.58□□□□□ -0.88
CTDP1-202ENST00000299543 HELZ2Q9BYK8 2649 aaKnown RBP9.58□□□□□ -0.88
CTDP1-202ENST00000299543 TRGV4A0A0C4DH28 118 aa9.58□□□□□ -0.88
CTDP1-202ENST00000299543 SPANXDQ9BXN6 97 aa9.58□□□□□ -0.88
CTDP1-202ENST00000299543 SPANXCQ9NY87 97 aa9.58□□□□□ -0.88
CTDP1-202ENST00000299543 TRAV23DV6A0A075B6W5 121 aa9.57□□□□□ -0.88
CTDP1-202ENST00000299543 DEFB121Q5J5C9 76 aa9.57□□□□□ -0.88
CTDP1-202ENST00000299543 PIK3CD-AS1Q5SR53 167 aa9.56□□□□□ -0.88
CTDP1-202ENST00000299543 LINC00308Q8TCZ7 52 aa9.56□□□□□ -0.88
CTDP1-202ENST00000299543 NDUFA1O15239 70 aa9.56□□□□□ -0.88
CTDP1-202ENST00000299543 ATP5G1P05496 136 aa9.56□□□□□ -0.88
CTDP1-202ENST00000299543 DEFB130BP0DP73 79 aa9.56□□□□□ -0.88
CTDP1-202ENST00000299543 DEFB130AP0DP74 79 aa9.56□□□□□ -0.88
CTDP1-202ENST00000299543 C20orf197Q8N268 126 aa9.56□□□□□ -0.88
CTDP1-202ENST00000299543 HECTD1Q9ULT8 2610 aa9.55□□□□□ -0.88
CTDP1-202ENST00000299543 FAM218AQ96MZ4 157 aa9.55□□□□□ -0.88
CTDP1-202ENST00000299543 TMEM243Q9BU79 118 aa9.55□□□□□ -0.88
CTDP1-202ENST00000299543 C11orf68Q9H3H3 251 aaKnown RBP9.55□□□□□ -0.88
CTDP1-202ENST00000299543 SMIM1B2RUZ4 78 aa9.55□□□□□ -0.88
CTDP1-202ENST00000299543 WIPF1O43516 503 aa9.55□□□□□ -0.88
CTDP1-202ENST00000299543 C22orf24Q9Y442 160 aa9.55□□□□□ -0.88
CTDP1-202ENST00000299543 CRYGAP11844 174 aa9.54□□□□□ -0.88
CTDP1-202ENST00000299543 RPL18AQ02543 176 aaKnown RBP9.54□□□□□ -0.88
CTDP1-202ENST00000299543 USP17L23D6RBM5 183 aa9.54□□□□□ -0.88
CTDP1-202ENST00000299543 KRTAP1-3Q8IUG1 177 aa9.54□□□□□ -0.88
CTDP1-202ENST00000299543 LINC01006Q8NI28 216 aa9.54□□□□□ -0.88
CTDP1-202ENST00000299543 LINC01600Q96MT4 127 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms