RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 Q5XG85 94 aa10.06□□□□□ -0.8
C9orf3-202ENST00000297979 C2orf91Q6ZV80 131 aa10.06□□□□□ -0.8
C9orf3-202ENST00000297979 FAM104AQ969W3 186 aa10.06□□□□□ -0.8
C9orf3-202ENST00000297979 SEC11AP67812 179 aa10.05□□□□□ -0.8
C9orf3-202ENST00000297979 NTM-AS1Q6ZSK4 140 aa10.05□□□□□ -0.8
C9orf3-202ENST00000297979 AMELXQ99217 191 aa10.05□□□□□ -0.8
C9orf3-202ENST00000297979 F8W1H4 67 aa10.04□□□□□ -0.8
C9orf3-202ENST00000297979 FABP2P12104 132 aa10.04□□□□□ -0.8
C9orf3-202ENST00000297979 C2orf48Q96LS8 159 aa10.04□□□□□ -0.8
C9orf3-202ENST00000297979 TIMM21Q9BVV7 248 aa10.04□□□□□ -0.8
C9orf3-202ENST00000297979 NFE4Q86UQ8 179 aa10.04□□□□□ -0.8
C9orf3-202ENST00000297979 CHAC1Q9BUX1 264 aa10.03□□□□□ -0.8
C9orf3-202ENST00000297979 FAM236AA0A1B0GUQ0 79 aa10.03□□□□□ -0.8
C9orf3-202ENST00000297979 FAM236BA0A1B0GV22 79 aa10.03□□□□□ -0.8
C9orf3-202ENST00000297979 E9PLD3 99 aa10.03□□□□□ -0.8
C9orf3-202ENST00000297979 DAD1P61803 113 aa10.03□□□□□ -0.8
C9orf3-202ENST00000297979 TTTY13Q9BZ97 58 aa10.03□□□□□ -0.8
C9orf3-202ENST00000297979 MAST4O15021 2626 aa10.03□□□□□ -0.8
C9orf3-202ENST00000297979 HERVK_113P61574 105 aa10.02□□□□□ -0.8
C9orf3-202ENST00000297979 GAGE2BQ13066 116 aa10.02□□□□□ -0.8
C9orf3-202ENST00000297979 GAGE2EQ4V326 116 aa10.02□□□□□ -0.8
C9orf3-202ENST00000297979 SBSPONQ8IVN8 264 aa10.02□□□□□ -0.8
C9orf3-202ENST00000297979 GAGE2DQ9UEU5 116 aa10.02□□□□□ -0.8
C9orf3-202ENST00000297979 PRO0255Q9UI72 69 aa10.02□□□□□ -0.8
C9orf3-202ENST00000297979 MRPS36P82909 103 aaKnown RBP10.02□□□□□ -0.81
C9orf3-202ENST00000297979 RNASE13Q5GAN3 156 aaKnown RBP10.02□□□□□ -0.81
C9orf3-202ENST00000297979 TMEM170BQ5T4T1 132 aa10.02□□□□□ -0.81
C9orf3-202ENST00000297979 CELA1Q9UNI1 258 aa10.02□□□□□ -0.81
C9orf3-202ENST00000297979 SAMD5Q5TGI4 173 aa10.02□□□□□ -0.81
C9orf3-202ENST00000297979 TMEM243Q9BU79 118 aa10.02□□□□□ -0.81
C9orf3-202ENST00000297979 SPART-AS1P0CW21 52 aa10.01□□□□□ -0.81
C9orf3-202ENST00000297979 TRBV25-1A0A075B6N4 114 aa10.01□□□□□ -0.81
C9orf3-202ENST00000297979 A0A0J9YXV3 536 aa10.01□□□□□ -0.81
C9orf3-202ENST00000297979 GYPEP15421 78 aa10.01□□□□□ -0.81
C9orf3-202ENST00000297979 CMYA5Q8N3K9 4069 aa10□□□□□ -0.81
C9orf3-202ENST00000297979 HERVK_113P63121 156 aa10□□□□□ -0.81
C9orf3-202ENST00000297979 NBEAL2Q6ZNJ1 2754 aa10□□□□□ -0.81
C9orf3-202ENST00000297979 UBE2L6O14933 153 aa9.99□□□□□ -0.81
C9orf3-202ENST00000297979 MAPKAPK5-AS1Q8N8E1 139 aa9.99□□□□□ -0.81
C9orf3-202ENST00000297979 ATP5G1P05496 136 aa9.99□□□□□ -0.81
C9orf3-202ENST00000297979 ZNF22P17026 224 aaPredicted RBP9.99□□□□□ -0.81
C9orf3-202ENST00000297979 FOXI1Q12951 378 aa9.99□□□□□ -0.81
C9orf3-202ENST00000297979 H7C423 109 aa9.98□□□□□ -0.81
C9orf3-202ENST00000297979 PAX4O43316 350 aa9.98□□□□□ -0.81
C9orf3-202ENST00000297979 RAB37Q96AX2 223 aa9.98□□□□□ -0.81
C9orf3-202ENST00000297979 HIGD1BQ9P298 99 aa9.98□□□□□ -0.81
C9orf3-202ENST00000297979 TRBV6-8A0A0A6YYG3 113 aa9.98□□□□□ -0.81
C9orf3-202ENST00000297979 ATP6V0E2Q8NHE4 81 aa9.98□□□□□ -0.81
C9orf3-202ENST00000297979 COL6A5A8TX70 2615 aa9.97□□□□□ -0.81
C9orf3-202ENST00000297979 MYMXA0A1B0GTQ4 84 aa9.97□□□□□ -0.81
C9orf3-202ENST00000297979 TMEM223A0PJW6 202 aa9.97□□□□□ -0.81
C9orf3-202ENST00000297979 APOMO95445 188 aa9.96□□□□□ -0.81
C9orf3-202ENST00000297979 UBE2D1P51668 147 aa9.96□□□□□ -0.81
C9orf3-202ENST00000297979 KLK5Q9Y337 293 aaPredicted RBP9.96□□□□□ -0.81
C9orf3-202ENST00000297979 VSIG2Q96IQ7 327 aa9.96□□□□□ -0.82
C9orf3-202ENST00000297979 A0A0J9YY99 117 aa9.95□□□□□ -0.82
C9orf3-202ENST00000297979 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
C9orf3-202ENST00000297979 PKD1L1Q8TDX9 2849 aa9.95□□□□□ -0.82
C9orf3-202ENST00000297979 ZNF815PA8K554 130 aa9.95□□□□□ -0.82
C9orf3-202ENST00000297979 CHCHD5Q9BSY4 110 aa9.94□□□□□ -0.82
C9orf3-202ENST00000297979 LEPROTO15243 131 aa9.93□□□□□ -0.82
C9orf3-202ENST00000297979 HTN3P15516 51 aa9.93□□□□□ -0.82
C9orf3-202ENST00000297979 TSPEAR-AS2P59090 65 aa9.93□□□□□ -0.82
C9orf3-202ENST00000297979 H3BS24 57 aa9.93□□□□□ -0.82
C9orf3-202ENST00000297979 J3QQQ9 107 aa9.93□□□□□ -0.82
C9orf3-202ENST00000297979 C11orf68Q9H3H3 251 aaKnown RBP9.93□□□□□ -0.82
C9orf3-202ENST00000297979 A0A0U1RQV1 116 aa9.92□□□□□ -0.82
C9orf3-202ENST00000297979 A0A096LPF7 62 aa9.92□□□□□ -0.82
C9orf3-202ENST00000297979 LGALS3P17931 250 aaKnown RBP9.92□□□□□ -0.82
C9orf3-202ENST00000297979 DNAH3Q8TD57 4116 aa9.92□□□□□ -0.82
C9orf3-202ENST00000297979 IGHV3-64A0A075B6Q5 118 aa9.92□□□□□ -0.82
C9orf3-202ENST00000297979 C12orf74Q32Q52 190 aa9.92□□□□□ -0.82
C9orf3-202ENST00000297979 FAM19A3Q7Z5A8 133 aa9.92□□□□□ -0.82
C9orf3-202ENST00000297979 PLEKHB2Q96CS7 222 aa9.92□□□□□ -0.82
C9orf3-202ENST00000297979 MDFIQ99750 246 aa9.92□□□□□ -0.82
C9orf3-202ENST00000297979 Q6Q795 121 aa9.91□□□□□ -0.82
C9orf3-202ENST00000297979 C10orf126Q8N4M7 172 aa9.91□□□□□ -0.82
C9orf3-202ENST00000297979 IGLV5-45A0A087WSX0 123 aa9.91□□□□□ -0.82
C9orf3-202ENST00000297979 TRAV13-1A0A0B4J241 112 aa9.91□□□□□ -0.82
C9orf3-202ENST00000297979 LINC00242Q5T6M2 205 aa9.91□□□□□ -0.82
C9orf3-202ENST00000297979 C9orf153Q5TBE3 101 aa9.91□□□□□ -0.82
C9orf3-202ENST00000297979 ANK2Q01484 3957 aa9.91□□□□□ -0.82
C9orf3-202ENST00000297979 PRB2P02812 416 aaPredicted RBP9.9□□□□□ -0.82
C9orf3-202ENST00000297979 SCGB1D4Q6XE38 83 aa9.9□□□□□ -0.82
C9orf3-202ENST00000297979 IGLV4-60A0A075B6I1 120 aa9.89□□□□□ -0.83
C9orf3-202ENST00000297979 IGHV1-58A0A0C4DH39 117 aa9.89□□□□□ -0.83
C9orf3-202ENST00000297979 A0A1B0GWB2 263 aa9.89□□□□□ -0.83
C9orf3-202ENST00000297979 SNCGO76070 127 aa9.89□□□□□ -0.83
C9orf3-202ENST00000297979 IGHV3-30-3P0DP02 117 aa9.89□□□□□ -0.83
C9orf3-202ENST00000297979 CDKN2A-AS1Q9UH64 79 aa9.89□□□□□ -0.83
C9orf3-202ENST00000297979 GCSHP23434 173 aa9.89□□□□□ -0.83
C9orf3-202ENST00000297979 TRAV8-3A0A0A6YYJ7 113 aa9.88□□□□□ -0.83
C9orf3-202ENST00000297979 COX6A2Q02221 97 aa9.88□□□□□ -0.83
C9orf3-202ENST00000297979 C11orf45Q8TAV5 145 aa9.88□□□□□ -0.83
C9orf3-202ENST00000297979 ICOSQ9Y6W8 199 aa9.88□□□□□ -0.83
C9orf3-202ENST00000297979 KPRPQ5T749 579 aaPredicted RBP9.88□□□□□ -0.83
C9orf3-202ENST00000297979 LYRM7Q5U5X0 104 aa9.88□□□□□ -0.83
C9orf3-202ENST00000297979 HIST1H4GQ99525 98 aa9.88□□□□□ -0.83
C9orf3-202ENST00000297979 K7EIL1 84 aa9.88□□□□□ -0.83
C9orf3-202ENST00000297979 CD164Q04900 197 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms