RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 TIRAPP58753 221 aa8.27□□□□□ -1.09
RHO-201ENST00000296271 Q1RN00 199 aa8.27□□□□□ -1.09
RHO-201ENST00000296271 TMEM243Q9BU79 118 aa8.27□□□□□ -1.09
RHO-201ENST00000296271 X6R8D5 127 aa8.27□□□□□ -1.09
RHO-201ENST00000296271 UBE2L6O14933 153 aa8.26□□□□□ -1.09
RHO-201ENST00000296271 CMC4P56277 68 aaPredicted RBP8.26□□□□□ -1.09
RHO-201ENST00000296271 DEFB135Q30KP9 77 aa8.26□□□□□ -1.09
RHO-201ENST00000296271 F5H768 121 aa8.26□□□□□ -1.09
RHO-201ENST00000296271 ERG28Q9UKR5 140 aa8.26□□□□□ -1.09
RHO-201ENST00000296271 TRBV6-4A0A1B0GX49 114 aa8.25□□□□□ -1.09
RHO-201ENST00000296271 MIAQ16674 131 aa8.25□□□□□ -1.09
RHO-201ENST00000296271 IGLV5-39A0A0G2JS06 123 aa8.25□□□□□ -1.09
RHO-201ENST00000296271 SOSTDC1Q6X4U4 206 aa8.25□□□□□ -1.09
RHO-201ENST00000296271 CHCHD5Q9BSY4 110 aa8.25□□□□□ -1.09
RHO-201ENST00000296271 FBN1P35555 2871 aaKnown RBP8.25□□□□□ -1.09
RHO-201ENST00000296271 TRIAP1O43715 76 aa8.24□□□□□ -1.09
RHO-201ENST00000296271 HERVK_113P63121 156 aa8.24□□□□□ -1.09
RHO-201ENST00000296271 CLPSL2Q6UWE3 100 aa8.24□□□□□ -1.09
RHO-201ENST00000296271 Q8N3U1 123 aa8.24□□□□□ -1.09
RHO-201ENST00000296271 A0A0B4J2C4 111 aa8.24□□□□□ -1.09
RHO-201ENST00000296271 NDUFA1O15239 70 aa8.24□□□□□ -1.09
RHO-201ENST00000296271 TRBV6-8A0A0A6YYG3 113 aa8.23□□□□□ -1.09
RHO-201ENST00000296271 GYPEP15421 78 aa8.23□□□□□ -1.09
RHO-201ENST00000296271 SPANXDQ9BXN6 97 aa8.23□□□□□ -1.09
RHO-201ENST00000296271 SPANXCQ9NY87 97 aa8.23□□□□□ -1.09
RHO-201ENST00000296271 CSDC2Q9Y534 153 aaKnown RBP8.23□□□□□ -1.09
RHO-201ENST00000296271 FAM222AQ5U5X8 452 aa8.23□□□□□ -1.09
RHO-201ENST00000296271 CARD19Q96LW7 228 aa8.23□□□□□ -1.09
RHO-201ENST00000296271 TOMM7Q9P0U1 55 aa8.23□□□□□ -1.09
RHO-201ENST00000296271 GTSF1LQ9H1H1 148 aa8.22□□□□□ -1.09
RHO-201ENST00000296271 ANK2Q01484 3957 aa8.22□□□□□ -1.09
RHO-201ENST00000296271 C9JAW5 83 aa8.22□□□□□ -1.09
RHO-201ENST00000296271 PRIMA1Q86XR5 153 aa8.22□□□□□ -1.09
RHO-201ENST00000296271 CLEC2BQ92478 149 aa8.22□□□□□ -1.09
RHO-201ENST00000296271 C5orf38Q86SI9 138 aa8.21□□□□□ -1.09
RHO-201ENST00000296271 C11orf68Q9H3H3 251 aaKnown RBP8.21□□□□□ -1.1
RHO-201ENST00000296271 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.2□□□□□ -1.1
RHO-201ENST00000296271 FOXI1Q12951 378 aa8.2□□□□□ -1.1
RHO-201ENST00000296271 LINC00308Q8TCZ7 52 aa8.2□□□□□ -1.1
RHO-201ENST00000296271 CELA1Q9UNI1 258 aa8.2□□□□□ -1.1
RHO-201ENST00000296271 TENM3Q9P273 2699 aa8.2□□□□□ -1.1
RHO-201ENST00000296271 TMEM262E9PQX1 116 aa8.2□□□□□ -1.1
RHO-201ENST00000296271 RPL13AP40429 203 aaKnown RBP8.2□□□□□ -1.1
RHO-201ENST00000296271 MEIG1Q5JSS6 88 aa8.2□□□□□ -1.1
RHO-201ENST00000296271 FAM19A3Q7Z5A8 133 aa8.19□□□□□ -1.1
RHO-201ENST00000296271 ANKRD29Q8N6D5 301 aa8.19□□□□□ -1.1
RHO-201ENST00000296271 ICOSQ9Y6W8 199 aa8.19□□□□□ -1.1
RHO-201ENST00000296271 MAST4O15021 2626 aa8.19□□□□□ -1.1
RHO-201ENST00000296271 NOTCH1P46531 2555 aa8.19□□□□□ -1.1
RHO-201ENST00000296271 C9orf66Q5T8R8 295 aa8.18□□□□□ -1.1
RHO-201ENST00000296271 ATP6V0E2Q8NHE4 81 aa8.18□□□□□ -1.1
RHO-201ENST00000296271 TRBV20-1A0A075B6N2 111 aa8.18□□□□□ -1.1
RHO-201ENST00000296271 IGHV4-28A0A0C4DH34 117 aa8.18□□□□□ -1.1
RHO-201ENST00000296271 GAGE12HA6NDE8 117 aa8.18□□□□□ -1.1
RHO-201ENST00000296271 SLC25A20O43772 301 aa8.18□□□□□ -1.1
RHO-201ENST00000296271 LINC00612Q8N6U2 182 aa8.18□□□□□ -1.1
RHO-201ENST00000296271 KIR2DL5BQ8NHK3 375 aa8.18□□□□□ -1.1
RHO-201ENST00000296271 HTN3P15516 51 aa8.17□□□□□ -1.1
RHO-201ENST00000296271 XCL1P47992 114 aa8.17□□□□□ -1.1
RHO-201ENST00000296271 CITED1Q99966 193 aa8.17□□□□□ -1.1
RHO-201ENST00000296271 IGHV3OR16-9A0A0B4J2B5 98 aa8.16□□□□□ -1.1
RHO-201ENST00000296271 SMAGPQ0VAQ4 97 aa8.16□□□□□ -1.1
RHO-201ENST00000296271 TRBV30A0A0K0K1B3 111 aa8.16□□□□□ -1.1
RHO-201ENST00000296271 TIMM17BO60830 172 aa8.16□□□□□ -1.1
RHO-201ENST00000296271 LINC01620Q4KN68 170 aa8.16□□□□□ -1.1
RHO-201ENST00000296271 LYRM7Q5U5X0 104 aa8.16□□□□□ -1.1
RHO-201ENST00000296271 TEN1Q86WV5 123 aa8.16□□□□□ -1.1
RHO-201ENST00000296271 LINC00959A0A1B0GUT2 108 aa8.16□□□□□ -1.1
RHO-201ENST00000296271 PAX4O43316 350 aa8.16□□□□□ -1.1
RHO-201ENST00000296271 CIRBPQ14011 172 aaKnown RBP8.16□□□□□ -1.1
RHO-201ENST00000296271 COX7B2Q8TF08 81 aa8.16□□□□□ -1.1
RHO-201ENST00000296271 IGLV10-54A0A075B6I4 117 aa8.15□□□□□ -1.1
RHO-201ENST00000296271 OXLD1Q5BKU9 147 aa8.15□□□□□ -1.1
RHO-201ENST00000296271 PRO0255Q9UI72 69 aa8.15□□□□□ -1.1
RHO-201ENST00000296271 PFN2P35080 140 aa8.15□□□□□ -1.11
RHO-201ENST00000296271 MIR7-3HGQ8N6C7 128 aa8.15□□□□□ -1.11
RHO-201ENST00000296271 TRAV26-1A0A087WT03 109 aa8.14□□□□□ -1.11
RHO-201ENST00000296271 C2orf82Q6UX34 121 aa8.14□□□□□ -1.11
RHO-201ENST00000296271 NTN5Q8WTR8 489 aaPredicted RBP8.14□□□□□ -1.11
RHO-201ENST00000296271 CDIP1Q9H305 208 aa8.14□□□□□ -1.11
RHO-201ENST00000296271 TEX49A0A1B0GTD5 131 aa8.14□□□□□ -1.11
RHO-201ENST00000296271 IGHV4-30-4P0DP06 118 aa8.13□□□□□ -1.11
RHO-201ENST00000296271 IFITM1P13164 125 aa8.13□□□□□ -1.11
RHO-201ENST00000296271 ATXN8Q156A1 80 aa8.13□□□□□ -1.11
RHO-201ENST00000296271 RETNQ9HD89 108 aa8.13□□□□□ -1.11
RHO-201ENST00000296271 CMYA5Q8N3K9 4069 aa8.13□□□□□ -1.11
RHO-201ENST00000296271 H7C423 109 aa8.13□□□□□ -1.11
RHO-201ENST00000296271 Q8NAQ8 132 aa8.13□□□□□ -1.11
RHO-201ENST00000296271 J3QR89 54 aa8.12□□□□□ -1.11
RHO-201ENST00000296271 DAD1P61803 113 aa8.12□□□□□ -1.11
RHO-201ENST00000296271 LINC00269Q8N2A0 174 aa8.12□□□□□ -1.11
RHO-201ENST00000296271 LINC00158P58513 81 aa8.12□□□□□ -1.11
RHO-201ENST00000296271 PPDPFLQ8WWR9 84 aa8.12□□□□□ -1.11
RHO-201ENST00000296271 SPATA25Q9BR10 227 aa8.12□□□□□ -1.11
RHO-201ENST00000296271 A0A087WZ39 114 aa8.11□□□□□ -1.11
RHO-201ENST00000296271 COL6A5A8TX70 2615 aa8.11□□□□□ -1.11
RHO-201ENST00000296271 SMIM9A6NGZ8 99 aa8.11□□□□□ -1.11
RHO-201ENST00000296271 LINC00337Q8N6G1 96 aa8.11□□□□□ -1.11
RHO-201ENST00000296271 SIGMAR1Q99720 223 aa8.11□□□□□ -1.11
RHO-201ENST00000296271 IGKV2-28A0A075B6P5 120 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 568.6 ms