RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 TRAV25A0A0B4J276 109 aa11.05□□□□□ -0.64
LRRTM1-201ENST00000295057 SNRPD3P62318 126 aaKnown RBP11.05□□□□□ -0.64
LRRTM1-201ENST00000295057 KNCNA6PVL3 124 aa11.04□□□□□ -0.64
LRRTM1-201ENST00000295057 NSD1Q96L73 2696 aaPredicted RBP11.04□□□□□ -0.64
LRRTM1-201ENST00000295057 FN1P02751 2386 aaKnown RBP11.04□□□□□ -0.64
LRRTM1-201ENST00000295057 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.04□□□□□ -0.64
LRRTM1-201ENST00000295057 A0A0U1RRA0 63 aa11.04□□□□□ -0.64
LRRTM1-201ENST00000295057 IGKV2-29A2NJV5 120 aaPredicted RBP11.04□□□□□ -0.64
LRRTM1-201ENST00000295057 PRM2P04554 102 aa11.04□□□□□ -0.64
LRRTM1-201ENST00000295057 JMJD1CQ15652 2540 aa11.03□□□□□ -0.64
LRRTM1-201ENST00000295057 TINCRA0A1B0GVN0 87 aa11.03□□□□□ -0.64
LRRTM1-201ENST00000295057 CRYGAP11844 174 aa11.03□□□□□ -0.64
LRRTM1-201ENST00000295057 RNASE1P07998 156 aaKnown RBP11.02□□□□□ -0.65
LRRTM1-201ENST00000295057 CXCL5P42830 114 aa11.02□□□□□ -0.65
LRRTM1-201ENST00000295057 DEFB131AP59861 70 aa11.02□□□□□ -0.65
LRRTM1-201ENST00000295057 ZNF625Q96I27 306 aaPredicted RBP11.02□□□□□ -0.65
LRRTM1-201ENST00000295057 CDKN2A-AS1Q9UH64 79 aa11.02□□□□□ -0.65
LRRTM1-201ENST00000295057 C5orf38Q86SI9 138 aa11.01□□□□□ -0.65
LRRTM1-201ENST00000295057 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.01□□□□□ -0.65
LRRTM1-201ENST00000295057 C2orf48Q96LS8 159 aa11.01□□□□□ -0.65
LRRTM1-201ENST00000295057 UBE2D4Q9Y2X8 147 aa11.01□□□□□ -0.65
LRRTM1-201ENST00000295057 VWFP04275 2813 aa11.01□□□□□ -0.65
LRRTM1-201ENST00000295057 RBMY1A1P0DJD3 496 aaKnown RBP11.01□□□□□ -0.65
LRRTM1-201ENST00000295057 RBMY1CP0DJD4 496 aa11.01□□□□□ -0.65
LRRTM1-201ENST00000295057 RBMY1FQ15415 496 aaKnown RBP11.01□□□□□ -0.65
LRRTM1-201ENST00000295057 Q6ZSN1 163 aa11.01□□□□□ -0.65
LRRTM1-201ENST00000295057 TENM1Q9UKZ4 2725 aa11□□□□□ -0.65
LRRTM1-201ENST00000295057 SDIM1Q6ZPB5 146 aa11□□□□□ -0.65
LRRTM1-201ENST00000295057 CHCHD7Q9BUK0 85 aa11□□□□□ -0.65
LRRTM1-201ENST00000295057 IGHV3-38A0A0C4DH36 116 aa11□□□□□ -0.65
LRRTM1-201ENST00000295057 DYNLRB2Q8TF09 96 aa11□□□□□ -0.65
LRRTM1-201ENST00000295057 PEMTQ9UBM1 199 aa11□□□□□ -0.65
LRRTM1-201ENST00000295057 NACAE9PAV3 2078 aa10.99□□□□□ -0.65
LRRTM1-201ENST00000295057 CCL24O00175 119 aa10.99□□□□□ -0.65
LRRTM1-201ENST00000295057 HILS1P60008 231 aa10.99□□□□□ -0.65
LRRTM1-201ENST00000295057 LINC00467Q9BRT7 94 aa10.99□□□□□ -0.65
LRRTM1-201ENST00000295057 INAFM1C9JVW0 142 aa10.99□□□□□ -0.65
LRRTM1-201ENST00000295057 DEFB114Q30KQ6 69 aa10.99□□□□□ -0.65
LRRTM1-201ENST00000295057 hADV29S1A0JD25 119 aa10.98□□□□□ -0.65
LRRTM1-201ENST00000295057 DAZ2Q13117 558 aaKnown RBP10.98□□□□□ -0.65
LRRTM1-201ENST00000295057 DAZ4Q86SG3 579 aaKnown RBP10.98□□□□□ -0.65
LRRTM1-201ENST00000295057 LINC00308Q8TCZ7 52 aa10.98□□□□□ -0.65
LRRTM1-201ENST00000295057 DAZ3Q9NR90 486 aaKnown RBP10.98□□□□□ -0.65
LRRTM1-201ENST00000295057 C2CD3Q4AC94 2353 aa10.98□□□□□ -0.65
LRRTM1-201ENST00000295057 ATOX1O00244 68 aa10.97□□□□□ -0.65
LRRTM1-201ENST00000295057 COX6A2Q02221 97 aa10.97□□□□□ -0.65
LRRTM1-201ENST00000295057 RBMY1BA6NDE4 496 aaKnown RBP10.97□□□□□ -0.65
LRRTM1-201ENST00000295057 RBMY1EA6NEQ0 496 aaKnown RBP10.97□□□□□ -0.65
LRRTM1-201ENST00000295057 COX7A2LO14548 114 aa10.97□□□□□ -0.65
LRRTM1-201ENST00000295057 TIMM17BO60830 172 aa10.97□□□□□ -0.65
LRRTM1-201ENST00000295057 TRACP01848 142 aa10.97□□□□□ -0.65
LRRTM1-201ENST00000295057 RBMY1DP0C7P1 496 aaKnown RBP10.97□□□□□ -0.65
LRRTM1-201ENST00000295057 SOSTDC1Q6X4U4 206 aa10.97□□□□□ -0.65
LRRTM1-201ENST00000295057 NDUFA1O15239 70 aa10.96□□□□□ -0.65
LRRTM1-201ENST00000295057 Q9H8V8 135 aa10.96□□□□□ -0.65
LRRTM1-201ENST00000295057 HIST1H4AP62805 103 aaKnown RBP10.96□□□□□ -0.66
LRRTM1-201ENST00000295057 C22orf24Q9Y442 160 aa10.96□□□□□ -0.66
LRRTM1-201ENST00000295057 NOTCH3Q9UM47 2321 aa10.95□□□□□ -0.66
LRRTM1-201ENST00000295057 C16orf95Q9H693 158 aa10.95□□□□□ -0.66
LRRTM1-201ENST00000295057 FAM218AQ96MZ4 157 aa10.95□□□□□ -0.66
LRRTM1-201ENST00000295057 CYSTM1Q9H1C7 97 aa10.95□□□□□ -0.66
LRRTM1-201ENST00000295057 MAP6D1Q9H9H5 199 aa10.95□□□□□ -0.66
LRRTM1-201ENST00000295057 KRTAP10-3P60369 221 aa10.94□□□□□ -0.66
LRRTM1-201ENST00000295057 BEAN1Q3B7T3 259 aa10.94□□□□□ -0.66
LRRTM1-201ENST00000295057 DPH3Q96FX2 82 aa10.94□□□□□ -0.66
LRRTM1-201ENST00000295057 BAALC-AS2P0C853 105 aa10.93□□□□□ -0.66
LRRTM1-201ENST00000295057 TMEM258P61165 79 aa10.93□□□□□ -0.66
LRRTM1-201ENST00000295057 CIRBPQ14011 172 aaKnown RBP10.93□□□□□ -0.66
LRRTM1-201ENST00000295057 KIR2DL5BQ8NHK3 375 aa10.93□□□□□ -0.66
LRRTM1-201ENST00000295057 TIRAPP58753 221 aa10.92□□□□□ -0.66
LRRTM1-201ENST00000295057 TRRAPQ9Y4A5 3859 aa10.91□□□□□ -0.66
LRRTM1-201ENST00000295057 Q9HAA7 133 aa10.91□□□□□ -0.66
LRRTM1-201ENST00000295057 ODF3L2Q3SX64 289 aa10.91□□□□□ -0.66
LRRTM1-201ENST00000295057 IGHV3OR16-12A0A075B7B8 117 aa10.9□□□□□ -0.66
LRRTM1-201ENST00000295057 IGLV5-45A0A087WSX0 123 aa10.9□□□□□ -0.66
LRRTM1-201ENST00000295057 ATRQ13535 2644 aa10.9□□□□□ -0.66
LRRTM1-201ENST00000295057 RPL18AQ02543 176 aaKnown RBP10.9□□□□□ -0.66
LRRTM1-201ENST00000295057 RS1O15537 224 aa10.89□□□□□ -0.67
LRRTM1-201ENST00000295057 INAFM2P0DMQ5 153 aa10.89□□□□□ -0.67
LRRTM1-201ENST00000295057 PIK3CD-AS1Q5SR53 167 aa10.89□□□□□ -0.67
LRRTM1-201ENST00000295057 LINC00242Q5T6M2 205 aa10.89□□□□□ -0.67
LRRTM1-201ENST00000295057 WFDC10AQ9H1F0 79 aa10.89□□□□□ -0.67
LRRTM1-201ENST00000295057 OXTP01178 125 aa10.88□□□□□ -0.67
LRRTM1-201ENST00000295057 TRAV13-1A0A0B4J241 112 aa10.88□□□□□ -0.67
LRRTM1-201ENST00000295057 IGLV5-39A0A0G2JS06 123 aa10.88□□□□□ -0.67
LRRTM1-201ENST00000295057 F5H768 121 aa10.88□□□□□ -0.67
LRRTM1-201ENST00000295057 C4orf26Q17RF5 130 aa10.88□□□□□ -0.67
LRRTM1-201ENST00000295057 DGAT2L7PQ6IED9 249 aa10.88□□□□□ -0.67
LRRTM1-201ENST00000295057 DSCR8Q96T75 97 aa10.87□□□□□ -0.67
LRRTM1-201ENST00000295057 PRIMA1Q86XR5 153 aa10.87□□□□□ -0.67
LRRTM1-201ENST00000295057 SMIM1B2RUZ4 78 aa10.86□□□□□ -0.67
LRRTM1-201ENST00000295057 C9orf129Q5T035 196 aaKnown RBP10.86□□□□□ -0.67
LRRTM1-201ENST00000295057 FAM222AQ5U5X8 452 aa10.86□□□□□ -0.67
LRRTM1-201ENST00000295057 SERP2Q8N6R1 65 aa10.86□□□□□ -0.67
LRRTM1-201ENST00000295057 XCL2Q9UBD3 114 aa10.86□□□□□ -0.67
LRRTM1-201ENST00000295057 SPATA3Q8NHX4 192 aa10.86□□□□□ -0.67
LRRTM1-201ENST00000295057 TEP1Q99973 2627 aaKnown RBP10.86□□□□□ -0.67
LRRTM1-201ENST00000295057 UPK3BQ9BT76 320 aa10.86□□□□□ -0.67
LRRTM1-201ENST00000295057 F8P00451 2351 aa10.86□□□□□ -0.67
LRRTM1-201ENST00000295057 HRCT1Q6UXD1 115 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms