RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 MIR7-3HGQ8N6C7 128 aa11.12□□□□□ -0.63
CAPN2-201ENST00000295006 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.12□□□□□ -0.63
CAPN2-201ENST00000295006 DNAJC30Q96LL9 226 aa11.12□□□□□ -0.63
CAPN2-201ENST00000295006 BAALC-AS2P0C853 105 aa11.11□□□□□ -0.63
CAPN2-201ENST00000295006 C1orf158Q8N1D5 194 aa11.11□□□□□ -0.63
CAPN2-201ENST00000295006 BBC3Q96PG8 261 aaPredicted RBP11.11□□□□□ -0.63
CAPN2-201ENST00000295006 COPS9Q8WXC6 57 aa11.1□□□□□ -0.63
CAPN2-201ENST00000295006 ATP5G1P05496 136 aa11.1□□□□□ -0.63
CAPN2-201ENST00000295006 IGLV10-54A0A075B6I4 117 aa11.1□□□□□ -0.63
CAPN2-201ENST00000295006 SND1-IT1Q9HBX3 110 aa11.08□□□□□ -0.63
CAPN2-201ENST00000295006 C11orf72Q8NBR9 251 aa11.08□□□□□ -0.64
CAPN2-201ENST00000295006 DAZ2Q13117 558 aaKnown RBP11.07□□□□□ -0.64
CAPN2-201ENST00000295006 DAZ4Q86SG3 579 aaKnown RBP11.07□□□□□ -0.64
CAPN2-201ENST00000295006 DAZ3Q9NR90 486 aaKnown RBP11.07□□□□□ -0.64
CAPN2-201ENST00000295006 NDUFA1O15239 70 aa11.07□□□□□ -0.64
CAPN2-201ENST00000295006 Q8N2B8 174 aa11.06□□□□□ -0.64
CAPN2-201ENST00000295006 SPANXDQ9BXN6 97 aa11.06□□□□□ -0.64
CAPN2-201ENST00000295006 SPANXCQ9NY87 97 aa11.06□□□□□ -0.64
CAPN2-201ENST00000295006 SMIM1B2RUZ4 78 aa11.05□□□□□ -0.64
CAPN2-201ENST00000295006 NTM-AS1Q6ZSK4 140 aa11.05□□□□□ -0.64
CAPN2-201ENST00000295006 LITAFQ99732 161 aa11.05□□□□□ -0.64
CAPN2-201ENST00000295006 LST1O00453 97 aa11.05□□□□□ -0.64
CAPN2-201ENST00000295006 NDUFV3P56181 108 aaKnown RBP11.05□□□□□ -0.64
CAPN2-201ENST00000295006 COX7B2Q8TF08 81 aa11.05□□□□□ -0.64
CAPN2-201ENST00000295006 H3BT86 120 aa11.04□□□□□ -0.64
CAPN2-201ENST00000295006 RNF152Q8N8N0 203 aa11.04□□□□□ -0.64
CAPN2-201ENST00000295006 NIPBLQ6KC79 2804 aaeCLIP11.04□□□□□ -0.64
CAPN2-201ENST00000295006 TIRAPP58753 221 aa11.04□□□□□ -0.64
CAPN2-201ENST00000295006 GYPEP15421 78 aa11.03□□□□□ -0.64
CAPN2-201ENST00000295006 SLPIP03973 132 aa11.03□□□□□ -0.64
CAPN2-201ENST00000295006 MALP21145 153 aa11.03□□□□□ -0.64
CAPN2-201ENST00000295006 CDC42SE2Q9NRR3 84 aa11.03□□□□□ -0.64
CAPN2-201ENST00000295006 CCDC179H3BU77 68 aa11.02□□□□□ -0.64
CAPN2-201ENST00000295006 IGLV4-60A0A075B6I1 120 aa11.02□□□□□ -0.65
CAPN2-201ENST00000295006 FAM236AA0A1B0GUQ0 79 aa11.01□□□□□ -0.65
CAPN2-201ENST00000295006 FAM236BA0A1B0GV22 79 aa11.01□□□□□ -0.65
CAPN2-201ENST00000295006 COX7A2LO14548 114 aa11.01□□□□□ -0.65
CAPN2-201ENST00000295006 SOSTDC1Q6X4U4 206 aa11.01□□□□□ -0.65
CAPN2-201ENST00000295006 ZNF843Q8N446 348 aa11.01□□□□□ -0.65
CAPN2-201ENST00000295006 ATRQ13535 2644 aa11.01□□□□□ -0.65
CAPN2-201ENST00000295006 TRBV10-1A0A0K0K1A3 114 aa11□□□□□ -0.65
CAPN2-201ENST00000295006 FAM104AQ969W3 186 aa11□□□□□ -0.65
CAPN2-201ENST00000295006 LECT2O14960 151 aa11□□□□□ -0.65
CAPN2-201ENST00000295006 CFAP161Q6P656 301 aa11□□□□□ -0.65
CAPN2-201ENST00000295006 LINC01006Q8NI28 216 aa11□□□□□ -0.65
CAPN2-201ENST00000295006 C16orf74Q96GX8 76 aa11□□□□□ -0.65
CAPN2-201ENST00000295006 HELZ2Q9BYK8 2649 aaKnown RBP10.99□□□□□ -0.65
CAPN2-201ENST00000295006 SETXQ7Z333 2677 aaKnown RBP10.99□□□□□ -0.65
CAPN2-201ENST00000295006 ANGP03950 147 aaKnown RBP10.99□□□□□ -0.65
CAPN2-201ENST00000295006 TRAV13-2A0A0B4J235 113 aa10.98□□□□□ -0.65
CAPN2-201ENST00000295006 IGKV3D-7A0A0C4DH55 119 aa10.98□□□□□ -0.65
CAPN2-201ENST00000295006 BEAN1Q3B7T3 259 aa10.98□□□□□ -0.65
CAPN2-201ENST00000295006 LINC00482Q8N8I6 264 aa10.98□□□□□ -0.65
CAPN2-201ENST00000295006 C14orf132Q9NPU4 83 aa10.98□□□□□ -0.65
CAPN2-201ENST00000295006 SBSPONQ8IVN8 264 aa10.98□□□□□ -0.65
CAPN2-201ENST00000295006 TMEM86BQ8N661 226 aa10.98□□□□□ -0.65
CAPN2-201ENST00000295006 HERV-K104P63124 156 aa10.98□□□□□ -0.65
CAPN2-201ENST00000295006 SS18Q15532 418 aa10.98□□□□□ -0.65
CAPN2-201ENST00000295006 SMR3AQ99954 134 aa10.98□□□□□ -0.65
CAPN2-201ENST00000295006 ITPR2Q14571 2701 aa10.97□□□□□ -0.65
CAPN2-201ENST00000295006 HIST1H4AP62805 103 aaKnown RBP10.97□□□□□ -0.65
CAPN2-201ENST00000295006 A0A096LNT2 108 aa10.96□□□□□ -0.65
CAPN2-201ENST00000295006 LINC00526Q96FQ7 95 aa10.96□□□□□ -0.65
CAPN2-201ENST00000295006 PRR3P79522 188 aaKnown RBP10.96□□□□□ -0.66
CAPN2-201ENST00000295006 SMIM20Q8N5G0 67 aa10.96□□□□□ -0.66
CAPN2-201ENST00000295006 TRAV25A0A0B4J276 109 aa10.95□□□□□ -0.66
CAPN2-201ENST00000295006 DEFB135Q30KP9 77 aa10.95□□□□□ -0.66
CAPN2-201ENST00000295006 F5H768 121 aa10.95□□□□□ -0.66
CAPN2-201ENST00000295006 TRBV6-8A0A0A6YYG3 113 aa10.95□□□□□ -0.66
CAPN2-201ENST00000295006 EDA2RQ9HAV5 297 aa10.95□□□□□ -0.66
CAPN2-201ENST00000295006 APCP25054 2843 aa10.94□□□□□ -0.66
CAPN2-201ENST00000295006 TIMM17BO60830 172 aa10.94□□□□□ -0.66
CAPN2-201ENST00000295006 S100A7L2Q5SY68 101 aa10.94□□□□□ -0.66
CAPN2-201ENST00000295006 FAM218AQ96MZ4 157 aa10.93□□□□□ -0.66
CAPN2-201ENST00000295006 SMIM11BQ8TCY0 68 aa10.92□□□□□ -0.66
CAPN2-201ENST00000295006 NCR3O14931 201 aa10.92□□□□□ -0.66
CAPN2-201ENST00000295006 CCL18P55774 89 aa10.92□□□□□ -0.66
CAPN2-201ENST00000295006 CMC4P56277 68 aaPredicted RBP10.92□□□□□ -0.66
CAPN2-201ENST00000295006 INAFM2P0DMQ5 153 aa10.91□□□□□ -0.66
CAPN2-201ENST00000295006 C9orf153Q5TBE3 101 aa10.91□□□□□ -0.66
CAPN2-201ENST00000295006 LINC00269Q8N2A0 174 aa10.91□□□□□ -0.66
CAPN2-201ENST00000295006 LINC00337Q8N6G1 96 aa10.91□□□□□ -0.66
CAPN2-201ENST00000295006 UBR5O95071 2799 aaPredicted RBP10.91□□□□□ -0.66
CAPN2-201ENST00000295006 FLNBO75369 2602 aaKnown RBP10.91□□□□□ -0.66
CAPN2-201ENST00000295006 SDIM1Q6ZPB5 146 aa10.91□□□□□ -0.66
CAPN2-201ENST00000295006 CR1P17927 2039 aa10.91□□□□□ -0.66
CAPN2-201ENST00000295006 A0A087WYN8 130 aa10.9□□□□□ -0.66
CAPN2-201ENST00000295006 IGLV5-39A0A0G2JS06 123 aa10.9□□□□□ -0.66
CAPN2-201ENST00000295006 FAM222AQ5U5X8 452 aa10.89□□□□□ -0.67
CAPN2-201ENST00000295006 CITED1Q99966 193 aa10.89□□□□□ -0.67
CAPN2-201ENST00000295006 FSHBP01225 129 aa10.89□□□□□ -0.67
CAPN2-201ENST00000295006 DAD1P61803 113 aa10.89□□□□□ -0.67
CAPN2-201ENST00000295006 C9orf116Q5BN46 136 aaPredicted RBP10.89□□□□□ -0.67
CAPN2-201ENST00000295006 TRBV6-4A0A1B0GX49 114 aa10.88□□□□□ -0.67
CAPN2-201ENST00000295006 LINC00959A0A1B0GUT2 108 aa10.87□□□□□ -0.67
CAPN2-201ENST00000295006 FHL2Q14192 279 aa10.87□□□□□ -0.67
CAPN2-201ENST00000295006 LAMTOR3Q9UHA4 124 aa10.87□□□□□ -0.67
CAPN2-201ENST00000295006 IGLV5-45A0A087WSX0 123 aa10.86□□□□□ -0.67
CAPN2-201ENST00000295006 F8P00451 2351 aa10.86□□□□□ -0.67
CAPN2-201ENST00000295006 Q8N3U1 123 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms