RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 TMEM243Q9BU79 118 aa12.2□□□□□ -0.46
CCDC78-201ENST00000293889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.19□□□□□ -0.46
CCDC78-201ENST00000293889 IGKV2-29A2NJV5 120 aaPredicted RBP12.19□□□□□ -0.46
CCDC78-201ENST00000293889 C11orf86A6NJI1 115 aa12.19□□□□□ -0.46
CCDC78-201ENST00000293889 C20orf203Q8NBC4 194 aa12.19□□□□□ -0.46
CCDC78-201ENST00000293889 NAA38Q9BRA0 125 aaKnown RBP12.19□□□□□ -0.46
CCDC78-201ENST00000293889 LINC00588Q9Y4M8 146 aa12.19□□□□□ -0.46
CCDC78-201ENST00000293889 CCL18P55774 89 aa12.19□□□□□ -0.46
CCDC78-201ENST00000293889 CHCHD5Q9BSY4 110 aa12.19□□□□□ -0.46
CCDC78-201ENST00000293889 K7ERJ3 54 aa12.18□□□□□ -0.46
CCDC78-201ENST00000293889 HERVK_113P61574 105 aa12.18□□□□□ -0.46
CCDC78-201ENST00000293889 RPL39P62891 51 aaKnown RBP12.18□□□□□ -0.46
CCDC78-201ENST00000293889 NFE4Q86UQ8 179 aa12.18□□□□□ -0.46
CCDC78-201ENST00000293889 LYSTQ99698 3801 aa12.17□□□□□ -0.46
CCDC78-201ENST00000293889 GAGE6Q13070 117 aa12.16□□□□□ -0.46
CCDC78-201ENST00000293889 RNF151Q2KHN1 245 aa12.16□□□□□ -0.46
CCDC78-201ENST00000293889 SPANXB1Q9NS25 103 aaPredicted RBP12.16□□□□□ -0.46
CCDC78-201ENST00000293889 KMT2CQ8NEZ4 4911 aaKnown RBP12.16□□□□□ -0.46
CCDC78-201ENST00000293889 UBE2L6O14933 153 aa12.15□□□□□ -0.46
CCDC78-201ENST00000293889 ZNF815PA8K554 130 aa12.15□□□□□ -0.47
CCDC78-201ENST00000293889 F8W1H4 67 aa12.15□□□□□ -0.47
CCDC78-201ENST00000293889 WFDC10BQ8IUB3 73 aa12.15□□□□□ -0.47
CCDC78-201ENST00000293889 TMEM238LA0A1B0GVL6 79 aa12.14□□□□□ -0.47
CCDC78-201ENST00000293889 A6NJY4 79 aa12.14□□□□□ -0.47
CCDC78-201ENST00000293889 H7C423 109 aa12.14□□□□□ -0.47
CCDC78-201ENST00000293889 UBE2D1P51668 147 aa12.14□□□□□ -0.47
CCDC78-201ENST00000293889 VPS25Q9BRG1 176 aa12.14□□□□□ -0.47
CCDC78-201ENST00000293889 TMEM262E9PQX1 116 aa12.13□□□□□ -0.47
CCDC78-201ENST00000293889 UBE2DNLQ8IWF7 75 aa12.12□□□□□ -0.47
CCDC78-201ENST00000293889 Q8N3U1 123 aa12.12□□□□□ -0.47
CCDC78-201ENST00000293889 UPK3BQ9BT76 320 aa12.12□□□□□ -0.47
CCDC78-201ENST00000293889 UBE2D4Q9Y2X8 147 aa12.12□□□□□ -0.47
CCDC78-201ENST00000293889 ALMS1Q8TCU4 4167 aa12.12□□□□□ -0.47
CCDC78-201ENST00000293889 PLEKHB2Q96CS7 222 aa12.11□□□□□ -0.47
CCDC78-201ENST00000293889 PYGO1Q9Y3Y4 419 aa12.11□□□□□ -0.47
CCDC78-201ENST00000293889 AMELXQ99217 191 aa12.11□□□□□ -0.47
CCDC78-201ENST00000293889 DNAH1Q9P2D7 4330 aa12.1□□□□□ -0.47
CCDC78-201ENST00000293889 LCE6AA0A183 80 aa12.1□□□□□ -0.47
CCDC78-201ENST00000293889 LINC00476Q8WZB0 136 aa12.1□□□□□ -0.47
CCDC78-201ENST00000293889 TIMM21Q9BVV7 248 aa12.1□□□□□ -0.47
CCDC78-201ENST00000293889 SPANXA1Q9NS26 97 aa12.1□□□□□ -0.47
CCDC78-201ENST00000293889 VPS13DQ5THJ4 4388 aa12.1□□□□□ -0.47
CCDC78-201ENST00000293889 OPRPNQ99935 248 aaPredicted RBP12.09□□□□□ -0.47
CCDC78-201ENST00000293889 SACSQ9NZJ4 4579 aa12.09□□□□□ -0.47
CCDC78-201ENST00000293889 IGLV4-60A0A075B6I1 120 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 A0A1B0GUV1 79 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 LEPROTO15243 131 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 DGAT2L7PQ6IED9 249 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 SCGB1D4Q6XE38 83 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 FAM104AQ969W3 186 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 PRO0461Q9UI25 63 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
CCDC78-201ENST00000293889 TMEM223A0PJW6 202 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 IGHV3-30P01768 117 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 IGHV3-33P01772 117 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 IGHV3-30-3P0DP02 117 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 IGHV3-30-5P0DP03 117 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 SMAGPQ0VAQ4 97 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 TMEM101Q96IK0 257 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 Q9H8V8 135 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 LY6G6CO95867 125 aa12.07□□□□□ -0.48
CCDC78-201ENST00000293889 DNAH10OSP0CZ25 163 aa12.07□□□□□ -0.48
CCDC78-201ENST00000293889 LINC01556Q5JQF7 62 aa12.07□□□□□ -0.48
CCDC78-201ENST00000293889 IGLV4-3A0A075B6K6 122 aa12.06□□□□□ -0.48
CCDC78-201ENST00000293889 J3QQQ9 107 aa12.06□□□□□ -0.48
CCDC78-201ENST00000293889 TSPEAR-AS2P59090 65 aa12.06□□□□□ -0.48
CCDC78-201ENST00000293889 Q6ZUT4 128 aa12.06□□□□□ -0.48
CCDC78-201ENST00000293889 CDC42SE2Q9NRR3 84 aa12.06□□□□□ -0.48
CCDC78-201ENST00000293889 SRSF9Q13242 221 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCDC78-201ENST00000293889 RNASE13Q5GAN3 156 aaKnown RBP12.05□□□□□ -0.48
CCDC78-201ENST00000293889 MRPS36P82909 103 aaKnown RBP12.04□□□□□ -0.48
CCDC78-201ENST00000293889 TMEM170BQ5T4T1 132 aa12.04□□□□□ -0.48
CCDC78-201ENST00000293889 ANGP03950 147 aaKnown RBP12.04□□□□□ -0.48
CCDC78-201ENST00000293889 ZNF22P17026 224 aaPredicted RBP12.04□□□□□ -0.48
CCDC78-201ENST00000293889 PGPEP1Q9NXJ5 209 aa12.04□□□□□ -0.48
CCDC78-201ENST00000293889 KLK12Q9UKR0 248 aa12.03□□□□□ -0.48
CCDC78-201ENST00000293889 HYDINQ4G0P3 5121 aa12.02□□□□□ -0.48
CCDC78-201ENST00000293889 LGALS3P17931 250 aaKnown RBP12.02□□□□□ -0.49
CCDC78-201ENST00000293889 LYRM7Q5U5X0 104 aa12.02□□□□□ -0.49
CCDC78-201ENST00000293889 LINC00269Q8N2A0 174 aa12.02□□□□□ -0.49
CCDC78-201ENST00000293889 VCX2Q9H322 139 aa12.02□□□□□ -0.49
CCDC78-201ENST00000293889 H3BMG7 143 aa12.01□□□□□ -0.49
CCDC78-201ENST00000293889 TSPAN13O95857 204 aa12.01□□□□□ -0.49
CCDC78-201ENST00000293889 WFDC2Q14508 124 aa12.01□□□□□ -0.49
CCDC78-201ENST00000293889 C21orf62-AS1Q17RA5 79 aa12□□□□□ -0.49
CCDC78-201ENST00000293889 CLPSL2Q6UWE3 100 aa12□□□□□ -0.49
CCDC78-201ENST00000293889 KMT2AQ03164 3969 aa12□□□□□ -0.49
CCDC78-201ENST00000293889 J3QR89 54 aa12□□□□□ -0.49
CCDC78-201ENST00000293889 RPL24P83731 157 aaKnown RBP12□□□□□ -0.49
CCDC78-201ENST00000293889 IGKV3OR2-268A0A0C4DH90 116 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 A0A0J9YXV3 536 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 CFC1BP0CG36 223 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 CFC1P0CG37 223 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 REG3AQ06141 175 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 C10orf126Q8N4M7 172 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 PRR34Q9NV39 138 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 RYR2Q92736 4967 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 RYR3Q15413 4870 aa11.97□□□□□ -0.49
CCDC78-201ENST00000293889 TRBV20-1A0A075B6N2 111 aa11.97□□□□□ -0.49
CCDC78-201ENST00000293889 ENHOQ6UWT2 76 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms