RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 KIR2DL5BQ8NHK3 375 aa8.36□□□□□ -1.07
NPC1L1-201ENST00000289547 DIRC1Q969H9 104 aa8.36□□□□□ -1.07
NPC1L1-201ENST00000289547 BRI3O95415 125 aa8.36□□□□□ -1.07
NPC1L1-201ENST00000289547 POLR2KP53803 58 aaKnown RBP8.36□□□□□ -1.07
NPC1L1-201ENST00000289547 LYRM9A8MSI8 78 aa8.35□□□□□ -1.07
NPC1L1-201ENST00000289547 C18orf65Q6ZTR6 163 aa8.35□□□□□ -1.07
NPC1L1-201ENST00000289547 Q6JHZ5 121 aa8.35□□□□□ -1.07
NPC1L1-201ENST00000289547 CHD9Q3L8U1 2897 aa8.35□□□□□ -1.07
NPC1L1-201ENST00000289547 NDUFC1O43677 76 aa8.35□□□□□ -1.07
NPC1L1-201ENST00000289547 PROK1P58294 105 aa8.35□□□□□ -1.07
NPC1L1-201ENST00000289547 CHD7Q9P2D1 2997 aa8.34□□□□□ -1.07
NPC1L1-201ENST00000289547 TRBV6-5A0A0K0K1A5 114 aa8.34□□□□□ -1.07
NPC1L1-201ENST00000289547 NDUFS5O43920 106 aa8.34□□□□□ -1.07
NPC1L1-201ENST00000289547 CAMK2N2Q96S95 79 aa8.34□□□□□ -1.07
NPC1L1-201ENST00000289547 ETDCA0A1B0GVM5 59 aa8.34□□□□□ -1.07
NPC1L1-201ENST00000289547 POM121L12Q8N7R1 296 aa8.34□□□□□ -1.07
NPC1L1-201ENST00000289547 ZFAND3Q9H8U3 227 aa8.34□□□□□ -1.07
NPC1L1-201ENST00000289547 UBE2BP63146 152 aa8.34□□□□□ -1.07
NPC1L1-201ENST00000289547 LINC00482Q8N8I6 264 aa8.34□□□□□ -1.07
NPC1L1-201ENST00000289547 IGIPA6NJ69 53 aa8.34□□□□□ -1.08
NPC1L1-201ENST00000289547 RNASE3P12724 160 aaKnown RBP8.34□□□□□ -1.08
NPC1L1-201ENST00000289547 TSPEAR-AS2P59090 65 aa8.34□□□□□ -1.08
NPC1L1-201ENST00000289547 PRR9Q5T870 116 aa8.34□□□□□ -1.08
NPC1L1-201ENST00000289547 ESM1Q9NQ30 184 aa8.34□□□□□ -1.08
NPC1L1-201ENST00000289547 Q8N2B8 174 aa8.33□□□□□ -1.08
NPC1L1-201ENST00000289547 PYGO1Q9Y3Y4 419 aa8.33□□□□□ -1.08
NPC1L1-201ENST00000289547 LRRK2Q5S007 2527 aa8.33□□□□□ -1.08
NPC1L1-201ENST00000289547 DEFB4AO15263 64 aa8.33□□□□□ -1.08
NPC1L1-201ENST00000289547 TSHBP01222 138 aa8.33□□□□□ -1.08
NPC1L1-201ENST00000289547 ATP5EP56381 51 aaPredicted RBP8.33□□□□□ -1.08
NPC1L1-201ENST00000289547 TRBV10-1A0A0K0K1A3 114 aa8.32□□□□□ -1.08
NPC1L1-201ENST00000289547 SMCPP49901 116 aaPredicted RBP8.32□□□□□ -1.08
NPC1L1-201ENST00000289547 SPAG11BQ08648 103 aa8.32□□□□□ -1.08
NPC1L1-201ENST00000289547 KRTAP24-1Q3LI83 254 aa8.31□□□□□ -1.08
NPC1L1-201ENST00000289547 SERP1Q9Y6X1 66 aa8.31□□□□□ -1.08
NPC1L1-201ENST00000289547 COX7BP24311 80 aa8.31□□□□□ -1.08
NPC1L1-201ENST00000289547 FAM222AQ5U5X8 452 aa8.31□□□□□ -1.08
NPC1L1-201ENST00000289547 IBA57-AS1B1ANH7 110 aa8.3□□□□□ -1.08
NPC1L1-201ENST00000289547 C6orf99Q4VX62 202 aa8.3□□□□□ -1.08
NPC1L1-201ENST00000289547 PRO0461Q9UI25 63 aa8.3□□□□□ -1.08
NPC1L1-201ENST00000289547 IGLV4-69A0A075B6H9 119 aa8.3□□□□□ -1.08
NPC1L1-201ENST00000289547 TRAV10A0A0B4J240 114 aa8.3□□□□□ -1.08
NPC1L1-201ENST00000289547 PRO0255Q9UI72 69 aa8.3□□□□□ -1.08
NPC1L1-201ENST00000289547 SOSTDC1Q6X4U4 206 aa8.3□□□□□ -1.08
NPC1L1-201ENST00000289547 SMIM11BQ8TCY0 68 aa8.3□□□□□ -1.08
NPC1L1-201ENST00000289547 IGKV2D-24A0A075B6R9 120 aa8.3□□□□□ -1.08
NPC1L1-201ENST00000289547 IGLV1-51P01701 117 aa8.29□□□□□ -1.08
NPC1L1-201ENST00000289547 DEFB131BA0A096LNP1 70 aa8.29□□□□□ -1.08
NPC1L1-201ENST00000289547 ABCA2Q9BZC7 2435 aa8.29□□□□□ -1.08
NPC1L1-201ENST00000289547 IGHV4-30-4P0DP06 118 aa8.29□□□□□ -1.08
NPC1L1-201ENST00000289547 FAM19A3Q7Z5A8 133 aa8.28□□□□□ -1.08
NPC1L1-201ENST00000289547 NHLRC4P0CG21 123 aaPredicted RBP8.28□□□□□ -1.08
NPC1L1-201ENST00000289547 PRR4Q16378 134 aa8.28□□□□□ -1.08
NPC1L1-201ENST00000289547 MRPS36P82909 103 aaKnown RBP8.28□□□□□ -1.08
NPC1L1-201ENST00000289547 Q6ZTI0 123 aa8.27□□□□□ -1.09
NPC1L1-201ENST00000289547 IGLV2-18A0A075B6J9 118 aa8.27□□□□□ -1.09
NPC1L1-201ENST00000289547 TRAV7A0A075B6U4 112 aa8.27□□□□□ -1.09
NPC1L1-201ENST00000289547 TRBV7-7A0A0K0K1E9 115 aa8.27□□□□□ -1.09
NPC1L1-201ENST00000289547 FSHBP01225 129 aa8.27□□□□□ -1.09
NPC1L1-201ENST00000289547 CRYGDP07320 174 aa8.27□□□□□ -1.09
NPC1L1-201ENST00000289547 ADAMTSL4-AS1Q5T5F5 129 aa8.26□□□□□ -1.09
NPC1L1-201ENST00000289547 CHKB-CPT1BH3BT56 60 aa8.26□□□□□ -1.09
NPC1L1-201ENST00000289547 NDUFB1O75438 58 aa8.25□□□□□ -1.09
NPC1L1-201ENST00000289547 Q6ZQY7 126 aa8.25□□□□□ -1.09
NPC1L1-201ENST00000289547 UBE2D4Q9Y2X8 147 aa8.25□□□□□ -1.09
NPC1L1-201ENST00000289547 CCKP06307 115 aa8.24□□□□□ -1.09
NPC1L1-201ENST00000289547 KLK12Q9UKR0 248 aa8.24□□□□□ -1.09
NPC1L1-201ENST00000289547 LRCOL1A6NCL2 159 aa8.24□□□□□ -1.09
NPC1L1-201ENST00000289547 NUPR2A6NF83 97 aa8.24□□□□□ -1.09
NPC1L1-201ENST00000289547 TRANK1O15050 2925 aa8.24□□□□□ -1.09
NPC1L1-201ENST00000289547 LINC00269Q8N2A0 174 aa8.23□□□□□ -1.09
NPC1L1-201ENST00000289547 JMJD1CQ15652 2540 aa8.23□□□□□ -1.09
NPC1L1-201ENST00000289547 PRO0628Q9UI54 55 aa8.22□□□□□ -1.09
NPC1L1-201ENST00000289547 KLLNB2CW77 178 aa8.22□□□□□ -1.09
NPC1L1-201ENST00000289547 C3orf84H3BNL1 204 aa8.22□□□□□ -1.09
NPC1L1-201ENST00000289547 SPATA3Q8NHX4 192 aa8.21□□□□□ -1.09
NPC1L1-201ENST00000289547 A6NED7 52 aa8.21□□□□□ -1.1
NPC1L1-201ENST00000289547 PMAIP1Q13794 54 aa8.21□□□□□ -1.1
NPC1L1-201ENST00000289547 ABCA12Q86UK0 2595 aa8.21□□□□□ -1.1
NPC1L1-201ENST00000289547 C4orf26Q17RF5 130 aa8.21□□□□□ -1.1
NPC1L1-201ENST00000289547 COX8CQ7Z4L0 72 aa8.21□□□□□ -1.1
NPC1L1-201ENST00000289547 DCANP1Q8TF63 244 aa8.21□□□□□ -1.1
NPC1L1-201ENST00000289547 C9orf85Q96MD7 179 aa8.21□□□□□ -1.1
NPC1L1-201ENST00000289547 WFDC10AQ9H1F0 79 aa8.21□□□□□ -1.1
NPC1L1-201ENST00000289547 A0A096LNT2 108 aa8.2□□□□□ -1.1
NPC1L1-201ENST00000289547 C14orf177Q52M58 125 aa8.2□□□□□ -1.1
NPC1L1-201ENST00000289547 FAM19A1Q7Z5A9 133 aa8.2□□□□□ -1.1
NPC1L1-201ENST00000289547 XAGE1AQ9HD64 81 aa8.2□□□□□ -1.1
NPC1L1-201ENST00000289547 LINC00846Q9NV44 126 aa8.2□□□□□ -1.1
NPC1L1-201ENST00000289547 RPL28P46779 137 aaKnown RBP8.2□□□□□ -1.1
NPC1L1-201ENST00000289547 NTM-AS1Q6ZSK4 140 aa8.2□□□□□ -1.1
NPC1L1-201ENST00000289547 C1orf158Q8N1D5 194 aa8.2□□□□□ -1.1
NPC1L1-201ENST00000289547 CRYGAP11844 174 aa8.19□□□□□ -1.1
NPC1L1-201ENST00000289547 LINC00242Q5T6M2 205 aa8.19□□□□□ -1.1
NPC1L1-201ENST00000289547 RANBP2P49792 3224 aaKnown RBP8.19□□□□□ -1.1
NPC1L1-201ENST00000289547 USP9XQ93008 2570 aaPredicted RBP8.19□□□□□ -1.1
NPC1L1-201ENST00000289547 A0A087WYN8 130 aa8.19□□□□□ -1.1
NPC1L1-201ENST00000289547 PRM2P04554 102 aa8.19□□□□□ -1.1
NPC1L1-201ENST00000289547 ODF3L2Q3SX64 289 aa8.19□□□□□ -1.1
NPC1L1-201ENST00000289547 CHCHD10Q8WYQ3 142 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms