RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 MRPL35Q9NZE8 188 aaKnown RBP6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 TRBV7-3A0A075B6L6 115 aa6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 A0A1B0GXF2 115 aa6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 LGALS9BQ3B8N2 356 aa6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 OCIAD2Q56VL3 154 aa6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 LINC00269Q8N2A0 174 aa6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 X6R8D5 127 aa6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 NDUFA1O15239 70 aa6.06□□□□□ -1.44
PTPDC1-201ENST00000288976 GAGE2AQ6NT46 116 aa6.06□□□□□ -1.44
PTPDC1-201ENST00000288976 C2orf82Q6UX34 121 aa6.06□□□□□ -1.44
PTPDC1-201ENST00000288976 SH2D6Q7Z4S9 175 aa6.06□□□□□ -1.44
PTPDC1-201ENST00000288976 DAND5Q8N907 189 aa6.06□□□□□ -1.44
PTPDC1-201ENST00000288976 TM2D3Q9BRN9 247 aa6.06□□□□□ -1.44
PTPDC1-201ENST00000288976 DNHD1Q96M86 4753 aa6.06□□□□□ -1.44
PTPDC1-201ENST00000288976 CEMP1Q6PRD7 247 aaPredicted RBP6.06□□□□□ -1.44
PTPDC1-201ENST00000288976 CHCHD1Q96BP2 118 aaKnown RBP6.06□□□□□ -1.44
PTPDC1-201ENST00000288976 RPL39P62891 51 aaKnown RBP6.05□□□□□ -1.44
PTPDC1-201ENST00000288976 HERVK_113P63121 156 aa6.05□□□□□ -1.44
PTPDC1-201ENST00000288976 VWFP04275 2813 aa6.05□□□□□ -1.44
PTPDC1-201ENST00000288976 TRAV10A0A0B4J240 114 aa6.05□□□□□ -1.44
PTPDC1-201ENST00000288976 PLAC8L1A1L4L8 177 aa6.05□□□□□ -1.44
PTPDC1-201ENST00000288976 LYRM9A8MSI8 78 aa6.05□□□□□ -1.44
PTPDC1-201ENST00000288976 C3orf79P0CE67 100 aa6.05□□□□□ -1.44
PTPDC1-201ENST00000288976 LINC00612Q8N6U2 182 aa6.05□□□□□ -1.44
PTPDC1-201ENST00000288976 GAGE12HA6NDE8 117 aa6.05□□□□□ -1.44
PTPDC1-201ENST00000288976 POM121L12Q8N7R1 296 aa6.05□□□□□ -1.44
PTPDC1-201ENST00000288976 B9D2Q9BPU9 175 aa6.05□□□□□ -1.44
PTPDC1-201ENST00000288976 XAGE1AQ9HD64 81 aa6.05□□□□□ -1.44
PTPDC1-201ENST00000288976 LAMTOR2Q9Y2Q5 125 aa6.05□□□□□ -1.44
PTPDC1-201ENST00000288976 C9JAW5 83 aa6.04□□□□□ -1.44
PTPDC1-201ENST00000288976 SIVA1O15304 175 aa6.04□□□□□ -1.44
PTPDC1-201ENST00000288976 MAJINQ3KP22 176 aa6.04□□□□□ -1.44
PTPDC1-201ENST00000288976 Q8NAQ8 132 aa6.04□□□□□ -1.44
PTPDC1-201ENST00000288976 DNAJC30Q96LL9 226 aa6.04□□□□□ -1.44
PTPDC1-201ENST00000288976 DLEU1O43261 78 aa6.04□□□□□ -1.44
PTPDC1-201ENST00000288976 NHLRC4P0CG21 123 aaPredicted RBP6.03□□□□□ -1.44
PTPDC1-201ENST00000288976 SYS1-DBNDD2H3BUS1 97 aa6.03□□□□□ -1.44
PTPDC1-201ENST00000288976 ZFP2Q6ZN57 461 aa6.03□□□□□ -1.44
PTPDC1-201ENST00000288976 HUWE1Q7Z6Z7 4374 aaKnown RBP6.03□□□□□ -1.44
PTPDC1-201ENST00000288976 SPINK6Q6UWN8 80 aa6.03□□□□□ -1.44
PTPDC1-201ENST00000288976 DNAH9Q9NYC9 4486 aa6.02□□□□□ -1.44
PTPDC1-201ENST00000288976 Q8N8P6 123 aa6.02□□□□□ -1.45
PTPDC1-201ENST00000288976 PPDPFQ9H3Y8 114 aa6.02□□□□□ -1.45
PTPDC1-201ENST00000288976 J3QQQ9 107 aa6.02□□□□□ -1.45
PTPDC1-201ENST00000288976 MPV17L2Q567V2 206 aa6.02□□□□□ -1.45
PTPDC1-201ENST00000288976 SLC25A29Q8N8R3 303 aa6.02□□□□□ -1.45
PTPDC1-201ENST00000288976 C7orf33Q8WU49 177 aa6.02□□□□□ -1.45
PTPDC1-201ENST00000288976 UFSP1Q6NVU6 142 aa6.02□□□□□ -1.45
PTPDC1-201ENST00000288976 FAM19A5Q7Z5A7 132 aaPredicted RBP6.02□□□□□ -1.45
PTPDC1-201ENST00000288976 SBSPONQ8IVN8 264 aa6.02□□□□□ -1.45
PTPDC1-201ENST00000288976 OPRPNQ99935 248 aaPredicted RBP6.02□□□□□ -1.45
PTPDC1-201ENST00000288976 NCR3O14931 201 aa6.01□□□□□ -1.45
PTPDC1-201ENST00000288976 DAZ4Q86SG3 579 aaKnown RBP6.01□□□□□ -1.45
PTPDC1-201ENST00000288976 DAZ3Q9NR90 486 aaKnown RBP6.01□□□□□ -1.45
PTPDC1-201ENST00000288976 UBE2D4Q9Y2X8 147 aa6.01□□□□□ -1.45
PTPDC1-201ENST00000288976 K7EMI3 77 aa6.01□□□□□ -1.45
PTPDC1-201ENST00000288976 NPSP0C0P6 89 aa6.01□□□□□ -1.45
PTPDC1-201ENST00000288976 C18orf32Q8TCD1 76 aa6.01□□□□□ -1.45
PTPDC1-201ENST00000288976 U3KQK5 164 aa6□□□□□ -1.45
PTPDC1-201ENST00000288976 REG3AQ06141 175 aa6□□□□□ -1.45
PTPDC1-201ENST00000288976 KIF25-AS1Q9Y6Z4 181 aa6□□□□□ -1.45
PTPDC1-201ENST00000288976 DYNC2H1Q8NCM8 4307 aaKnown RBP6□□□□□ -1.45
PTPDC1-201ENST00000288976 F8VRH5 84 aa6□□□□□ -1.45
PTPDC1-201ENST00000288976 C14orf177Q52M58 125 aa6□□□□□ -1.45
PTPDC1-201ENST00000288976 DSCR8Q96T75 97 aa6□□□□□ -1.45
PTPDC1-201ENST00000288976 SND1-IT1Q9HBX3 110 aa5.99□□□□□ -1.45
PTPDC1-201ENST00000288976 DKK2Q9UBU2 259 aa5.99□□□□□ -1.45
PTPDC1-201ENST00000288976 CRYBA4P53673 196 aa5.99□□□□□ -1.45
PTPDC1-201ENST00000288976 HSD52Q0P140 79 aa5.99□□□□□ -1.45
PTPDC1-201ENST00000288976 CFAP126Q5VTH2 177 aa5.99□□□□□ -1.45
PTPDC1-201ENST00000288976 PKIGQ9Y2B9 76 aa5.99□□□□□ -1.45
PTPDC1-201ENST00000288976 UBE2D1P51668 147 aa5.99□□□□□ -1.45
PTPDC1-201ENST00000288976 FAM19A1Q7Z5A9 133 aa5.99□□□□□ -1.45
PTPDC1-201ENST00000288976 COX7B2Q8TF08 81 aa5.98□□□□□ -1.45
PTPDC1-201ENST00000288976 RNF185Q96GF1 192 aa5.98□□□□□ -1.45
PTPDC1-201ENST00000288976 NUPR2A6NF83 97 aa5.98□□□□□ -1.45
PTPDC1-201ENST00000288976 LINC00315P59091 139 aa5.98□□□□□ -1.45
PTPDC1-201ENST00000288976 Q6ZTC4 211 aa5.98□□□□□ -1.45
PTPDC1-201ENST00000288976 SIGMAR1Q99720 223 aa5.98□□□□□ -1.45
PTPDC1-201ENST00000288976 TRAV8-4A0A0B4J246 113 aa5.97□□□□□ -1.45
PTPDC1-201ENST00000288976 COX11Q9Y6N1 276 aa5.97□□□□□ -1.45
PTPDC1-201ENST00000288976 PRSS47A8MTI9 375 aa5.97□□□□□ -1.45
PTPDC1-201ENST00000288976 H0Y9J4 135 aa5.97□□□□□ -1.45
PTPDC1-201ENST00000288976 LOC100131303A0A0U1RQF7 123 aa5.97□□□□□ -1.45
PTPDC1-201ENST00000288976 GTSF1LQ9H1H1 148 aa5.97□□□□□ -1.45
PTPDC1-201ENST00000288976 C20orf78Q9BR46 151 aa5.97□□□□□ -1.45
PTPDC1-201ENST00000288976 CHCHD10Q8WYQ3 142 aaPredicted RBP5.96□□□□□ -1.45
PTPDC1-201ENST00000288976 NDUFB1O75438 58 aa5.96□□□□□ -1.46
PTPDC1-201ENST00000288976 FUSP35637 526 aaKnown RBP eCLIP5.96□□□□□ -1.46
PTPDC1-201ENST00000288976 SPANXA1Q9NS26 97 aa5.96□□□□□ -1.46
PTPDC1-201ENST00000288976 IGKV2-28A0A075B6P5 120 aa5.96□□□□□ -1.46
PTPDC1-201ENST00000288976 IGKV2D-28P01615 120 aa5.96□□□□□ -1.46
PTPDC1-201ENST00000288976 HRCT1Q6UXD1 115 aa5.96□□□□□ -1.46
PTPDC1-201ENST00000288976 TTTY13Q9BZ97 58 aa5.96□□□□□ -1.46
PTPDC1-201ENST00000288976 UBL5Q9BZL1 73 aa5.96□□□□□ -1.46
PTPDC1-201ENST00000288976 PKD1L1Q8TDX9 2849 aa5.96□□□□□ -1.46
PTPDC1-201ENST00000288976 TRBV6-4A0A1B0GX49 114 aa5.95□□□□□ -1.46
PTPDC1-201ENST00000288976 TRACP01848 142 aa5.95□□□□□ -1.46
PTPDC1-201ENST00000288976 MIR7-3HGQ8N6C7 128 aa5.95□□□□□ -1.46
PTPDC1-201ENST00000288976 DNAH7Q8WXX0 4024 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 352.4 ms