RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 TP53TG1Q9Y2A0 90 aa8.84□□□□□ -0.99
CAPN9-201ENST00000271971 GAGE12JA6NER3 117 aa8.83□□□□□ -1
CAPN9-201ENST00000271971 LYRM9A8MSI8 78 aa8.83□□□□□ -1
CAPN9-201ENST00000271971 GAGE4Q13068 117 aa8.83□□□□□ -1
CAPN9-201ENST00000271971 PMVKQ15126 192 aa8.83□□□□□ -1
CAPN9-201ENST00000271971 IGIPA6NJ69 53 aa8.83□□□□□ -1
CAPN9-201ENST00000271971 SPANXA1Q9NS26 97 aa8.83□□□□□ -1
CAPN9-201ENST00000271971 SCGB1C2P0DMR2 95 aa8.82□□□□□ -1
CAPN9-201ENST00000271971 DNAJC30Q96LL9 226 aa8.82□□□□□ -1
CAPN9-201ENST00000271971 TIMM17AQ99595 171 aa8.82□□□□□ -1
CAPN9-201ENST00000271971 HUWE1Q7Z6Z7 4374 aaKnown RBP8.81□□□□□ -1
CAPN9-201ENST00000271971 A0A0B4J2C4 111 aa8.81□□□□□ -1
CAPN9-201ENST00000271971 TRBV10-1A0A0K0K1A3 114 aa8.81□□□□□ -1
CAPN9-201ENST00000271971 SLC25A20O43772 301 aa8.81□□□□□ -1
CAPN9-201ENST00000271971 DAD1P61803 113 aa8.81□□□□□ -1
CAPN9-201ENST00000271971 RPL36AP83881 106 aaKnown RBP8.81□□□□□ -1
CAPN9-201ENST00000271971 KPRPQ5T749 579 aaPredicted RBP8.81□□□□□ -1
CAPN9-201ENST00000271971 RPL36ALQ969Q0 106 aaKnown RBP8.81□□□□□ -1
CAPN9-201ENST00000271971 AMELXQ99217 191 aa8.81□□□□□ -1
CAPN9-201ENST00000271971 TRBV6-4A0A1B0GX49 114 aa8.8□□□□□ -1
CAPN9-201ENST00000271971 RHOHQ15669 191 aa8.8□□□□□ -1
CAPN9-201ENST00000271971 DEFB121Q5J5C9 76 aa8.8□□□□□ -1
CAPN9-201ENST00000271971 MRAPQ8TCY5 172 aa8.8□□□□□ -1
CAPN9-201ENST00000271971 CCDC179H3BU77 68 aa8.8□□□□□ -1
CAPN9-201ENST00000271971 SPART-AS1P0CW21 52 aa8.79□□□□□ -1
CAPN9-201ENST00000271971 NDUFV3P56181 108 aaKnown RBP8.79□□□□□ -1
CAPN9-201ENST00000271971 IGHV3-33P01772 117 aa8.79□□□□□ -1
CAPN9-201ENST00000271971 RPL13AP40429 203 aaKnown RBP8.79□□□□□ -1
CAPN9-201ENST00000271971 C20orf203Q8NBC4 194 aa8.79□□□□□ -1
CAPN9-201ENST00000271971 HTN3P15516 51 aa8.78□□□□□ -1
CAPN9-201ENST00000271971 GAGE2BQ13066 116 aa8.78□□□□□ -1
CAPN9-201ENST00000271971 GAGE2EQ4V326 116 aa8.78□□□□□ -1
CAPN9-201ENST00000271971 CHCHD7Q9BUK0 85 aa8.78□□□□□ -1
CAPN9-201ENST00000271971 GAGE2DQ9UEU5 116 aa8.78□□□□□ -1
CAPN9-201ENST00000271971 COL7A1Q02388 2944 aa8.78□□□□□ -1
CAPN9-201ENST00000271971 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.78□□□□□ -1
CAPN9-201ENST00000271971 IGKV2-29A2NJV5 120 aaPredicted RBP8.78□□□□□ -1
CAPN9-201ENST00000271971 J3QQQ9 107 aa8.78□□□□□ -1
CAPN9-201ENST00000271971 TSPEAR-AS2P59090 65 aa8.78□□□□□ -1
CAPN9-201ENST00000271971 HERV-K104P63124 156 aa8.78□□□□□ -1
CAPN9-201ENST00000271971 OPRPNQ99935 248 aaPredicted RBP8.78□□□□□ -1
CAPN9-201ENST00000271971 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.77□□□□□ -1.01
CAPN9-201ENST00000271971 LEPROTO15243 131 aa8.77□□□□□ -1.01
CAPN9-201ENST00000271971 LGALS3P17931 250 aaKnown RBP8.77□□□□□ -1.01
CAPN9-201ENST00000271971 MRPL23Q16540 153 aaKnown RBP8.77□□□□□ -1.01
CAPN9-201ENST00000271971 CEMP1Q6PRD7 247 aaPredicted RBP8.77□□□□□ -1.01
CAPN9-201ENST00000271971 C9JAW5 83 aa8.77□□□□□ -1.01
CAPN9-201ENST00000271971 SNCGO76070 127 aa8.77□□□□□ -1.01
CAPN9-201ENST00000271971 ATXN8Q156A1 80 aa8.77□□□□□ -1.01
CAPN9-201ENST00000271971 NTM-AS1Q6ZSK4 140 aa8.77□□□□□ -1.01
CAPN9-201ENST00000271971 A0A0J9YWU9 116 aa8.76□□□□□ -1.01
CAPN9-201ENST00000271971 EIF4EBP3O60516 100 aaPredicted RBP8.76□□□□□ -1.01
CAPN9-201ENST00000271971 GYPEP15421 78 aa8.76□□□□□ -1.01
CAPN9-201ENST00000271971 DAZ4Q86SG3 579 aaKnown RBP8.76□□□□□ -1.01
CAPN9-201ENST00000271971 DAZ3Q9NR90 486 aaKnown RBP8.76□□□□□ -1.01
CAPN9-201ENST00000271971 A4D1N5 150 aa8.76□□□□□ -1.01
CAPN9-201ENST00000271971 ATP5G1P05496 136 aa8.76□□□□□ -1.01
CAPN9-201ENST00000271971 PRO0255Q9UI72 69 aa8.76□□□□□ -1.01
CAPN9-201ENST00000271971 DNAH9Q9NYC9 4486 aa8.75□□□□□ -1.01
CAPN9-201ENST00000271971 A0A096LPF7 62 aa8.75□□□□□ -1.01
CAPN9-201ENST00000271971 F5H768 121 aa8.75□□□□□ -1.01
CAPN9-201ENST00000271971 LINC00694P0DN24 101 aa8.75□□□□□ -1.01
CAPN9-201ENST00000271971 LINC01620Q4KN68 170 aa8.75□□□□□ -1.01
CAPN9-201ENST00000271971 TRBV30A0A0K0K1B3 111 aa8.75□□□□□ -1.01
CAPN9-201ENST00000271971 TMEM223A0PJW6 202 aa8.75□□□□□ -1.01
CAPN9-201ENST00000271971 PAX4O43316 350 aa8.75□□□□□ -1.01
CAPN9-201ENST00000271971 IFITM1P13164 125 aa8.75□□□□□ -1.01
CAPN9-201ENST00000271971 TMEM170BQ5T4T1 132 aa8.75□□□□□ -1.01
CAPN9-201ENST00000271971 SMIM20Q8N5G0 67 aa8.75□□□□□ -1.01
CAPN9-201ENST00000271971 VSIG2Q96IQ7 327 aa8.75□□□□□ -1.01
CAPN9-201ENST00000271971 TRBV10-2A0A0K0K1G8 114 aa8.74□□□□□ -1.01
CAPN9-201ENST00000271971 RNASE13Q5GAN3 156 aaKnown RBP8.74□□□□□ -1.01
CAPN9-201ENST00000271971 C11orf68Q9H3H3 251 aaKnown RBP8.74□□□□□ -1.01
CAPN9-201ENST00000271971 TTC32Q5I0X7 151 aa8.73□□□□□ -1.01
CAPN9-201ENST00000271971 TM2D3Q9BRN9 247 aa8.73□□□□□ -1.01
CAPN9-201ENST00000271971 Q6ZTC4 211 aa8.73□□□□□ -1.01
CAPN9-201ENST00000271971 FAM104AQ969W3 186 aa8.73□□□□□ -1.01
CAPN9-201ENST00000271971 IGLV4-3A0A075B6K6 122 aa8.72□□□□□ -1.01
CAPN9-201ENST00000271971 TRAV8-4A0A0B4J246 113 aa8.72□□□□□ -1.01
CAPN9-201ENST00000271971 NTN5Q8WTR8 489 aaPredicted RBP8.72□□□□□ -1.01
CAPN9-201ENST00000271971 UBE2D4Q9Y2X8 147 aa8.72□□□□□ -1.01
CAPN9-201ENST00000271971 STAB2Q8WWQ8 2551 aa8.72□□□□□ -1.01
CAPN9-201ENST00000271971 NANOS2P60321 138 aaKnown RBP8.71□□□□□ -1.01
CAPN9-201ENST00000271971 MUSTN1Q8IVN3 82 aa8.71□□□□□ -1.01
CAPN9-201ENST00000271971 FAM240AA0A1B0GVK7 77 aa8.71□□□□□ -1.02
CAPN9-201ENST00000271971 H3BT86 120 aa8.7□□□□□ -1.02
CAPN9-201ENST00000271971 PRKDCP78527 4128 aaKnown RBP8.7□□□□□ -1.02
CAPN9-201ENST00000271971 UBE2WQ96B02 151 aa8.7□□□□□ -1.02
CAPN9-201ENST00000271971 TMEM243Q9BU79 118 aa8.7□□□□□ -1.02
CAPN9-201ENST00000271971 PYGO1Q9Y3Y4 419 aa8.7□□□□□ -1.02
CAPN9-201ENST00000271971 MEGF8Q7Z7M0 2845 aa8.69□□□□□ -1.02
CAPN9-201ENST00000271971 TRBV6-8A0A0A6YYG3 113 aa8.69□□□□□ -1.02
CAPN9-201ENST00000271971 ZNF22P17026 224 aaPredicted RBP8.69□□□□□ -1.02
CAPN9-201ENST00000271971 C15orf53Q8NAA6 179 aa8.69□□□□□ -1.02
CAPN9-201ENST00000271971 C11orf45Q8TAV5 145 aa8.69□□□□□ -1.02
CAPN9-201ENST00000271971 TEX49A0A1B0GTD5 131 aa8.68□□□□□ -1.02
CAPN9-201ENST00000271971 UBE2L6O14933 153 aa8.68□□□□□ -1.02
CAPN9-201ENST00000271971 A0A0J9YXY3 114 aa8.68□□□□□ -1.02
CAPN9-201ENST00000271971 SPANXDQ9BXN6 97 aa8.68□□□□□ -1.02
CAPN9-201ENST00000271971 SPANXCQ9NY87 97 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms