RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 TRAV13-1A0A0B4J241 112 aa9.16□□□□□ -0.94
CPSF6-201ENST00000266679 LINC00242Q5T6M2 205 aa9.16□□□□□ -0.94
CPSF6-201ENST00000266679 FAM110AQ9BQ89 295 aa9.16□□□□□ -0.94
CPSF6-201ENST00000266679 C1QTNF4Q9BXJ3 329 aa9.16□□□□□ -0.94
CPSF6-201ENST00000266679 KRTAP10-3P60369 221 aa9.16□□□□□ -0.94
CPSF6-201ENST00000266679 HERVK_113P63121 156 aa9.16□□□□□ -0.94
CPSF6-201ENST00000266679 CSNK1G2-AS1Q8NCQ2 148 aa9.16□□□□□ -0.94
CPSF6-201ENST00000266679 UBE2L6O14933 153 aa9.15□□□□□ -0.95
CPSF6-201ENST00000266679 NDUFA1O15239 70 aa9.15□□□□□ -0.95
CPSF6-201ENST00000266679 DAND5Q8N907 189 aa9.15□□□□□ -0.95
CPSF6-201ENST00000266679 NOTCH3Q9UM47 2321 aa9.14□□□□□ -0.95
CPSF6-201ENST00000266679 TRGV4A0A0C4DH28 118 aa9.14□□□□□ -0.95
CPSF6-201ENST00000266679 PF4P02776 101 aa9.14□□□□□ -0.95
CPSF6-201ENST00000266679 TMEM243Q9BU79 118 aa9.14□□□□□ -0.95
CPSF6-201ENST00000266679 ATP6V0E2Q8NHE4 81 aa9.13□□□□□ -0.95
CPSF6-201ENST00000266679 OVOL2Q9BRP0 275 aa9.13□□□□□ -0.95
CPSF6-201ENST00000266679 CDC42SE2Q9NRR3 84 aa9.13□□□□□ -0.95
CPSF6-201ENST00000266679 CSDC2Q9Y534 153 aaKnown RBP9.13□□□□□ -0.95
CPSF6-201ENST00000266679 NOTCH1P46531 2555 aa9.12□□□□□ -0.95
CPSF6-201ENST00000266679 IGLV5-39A0A0G2JS06 123 aa9.12□□□□□ -0.95
CPSF6-201ENST00000266679 SMIM1B2RUZ4 78 aa9.12□□□□□ -0.95
CPSF6-201ENST00000266679 TIMM17BO60830 172 aa9.12□□□□□ -0.95
CPSF6-201ENST00000266679 FOXI1Q12951 378 aa9.12□□□□□ -0.95
CPSF6-201ENST00000266679 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
CPSF6-201ENST00000266679 Q9H8V8 135 aa9.12□□□□□ -0.95
CPSF6-201ENST00000266679 GAGE12HA6NDE8 117 aa9.12□□□□□ -0.95
CPSF6-201ENST00000266679 SMAGPQ0VAQ4 97 aa9.12□□□□□ -0.95
CPSF6-201ENST00000266679 FAM19A3Q7Z5A8 133 aa9.12□□□□□ -0.95
CPSF6-201ENST00000266679 GTSF1LQ9H1H1 148 aa9.12□□□□□ -0.95
CPSF6-201ENST00000266679 TRBV6-4A0A1B0GX49 114 aa9.11□□□□□ -0.95
CPSF6-201ENST00000266679 TRIAP1O43715 76 aa9.11□□□□□ -0.95
CPSF6-201ENST00000266679 TGP01266 2768 aa9.11□□□□□ -0.95
CPSF6-201ENST00000266679 A0A0U1RRA0 63 aa9.11□□□□□ -0.95
CPSF6-201ENST00000266679 C9JAW5 83 aa9.11□□□□□ -0.95
CPSF6-201ENST00000266679 GAGE6Q13070 117 aa9.11□□□□□ -0.95
CPSF6-201ENST00000266679 TEN1Q86WV5 123 aa9.1□□□□□ -0.95
CPSF6-201ENST00000266679 ANKRD29Q8N6D5 301 aa9.1□□□□□ -0.95
CPSF6-201ENST00000266679 LINC00482Q8N8I6 264 aa9.1□□□□□ -0.95
CPSF6-201ENST00000266679 FHL2Q14192 279 aa9.09□□□□□ -0.95
CPSF6-201ENST00000266679 CARD19Q96LW7 228 aa9.09□□□□□ -0.95
CPSF6-201ENST00000266679 ICOSQ9Y6W8 199 aa9.09□□□□□ -0.95
CPSF6-201ENST00000266679 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
CPSF6-201ENST00000266679 F5H768 121 aa9.09□□□□□ -0.95
CPSF6-201ENST00000266679 SLC25A20O43772 301 aa9.09□□□□□ -0.95
CPSF6-201ENST00000266679 IFITM1P13164 125 aa9.09□□□□□ -0.95
CPSF6-201ENST00000266679 RPL13AP40429 203 aaKnown RBP9.09□□□□□ -0.95
CPSF6-201ENST00000266679 CIRBPQ14011 172 aaKnown RBP9.09□□□□□ -0.95
CPSF6-201ENST00000266679 ATXN8Q156A1 80 aa9.09□□□□□ -0.95
CPSF6-201ENST00000266679 PPDPFLQ8WWR9 84 aa9.09□□□□□ -0.95
CPSF6-201ENST00000266679 SPATA25Q9BR10 227 aa9.09□□□□□ -0.95
CPSF6-201ENST00000266679 TRBV30A0A0K0K1B3 111 aa9.08□□□□□ -0.96
CPSF6-201ENST00000266679 CIDEAO60543 219 aa9.08□□□□□ -0.96
CPSF6-201ENST00000266679 DEFB130BP0DP73 79 aa9.08□□□□□ -0.96
CPSF6-201ENST00000266679 DEFB130AP0DP74 79 aa9.08□□□□□ -0.96
CPSF6-201ENST00000266679 SIGMAR1Q99720 223 aa9.08□□□□□ -0.96
CPSF6-201ENST00000266679 PRKDCP78527 4128 aaKnown RBP9.08□□□□□ -0.96
CPSF6-201ENST00000266679 LINC01620Q4KN68 170 aa9.07□□□□□ -0.96
CPSF6-201ENST00000266679 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
CPSF6-201ENST00000266679 SHISA2Q6UWI4 295 aa9.07□□□□□ -0.96
CPSF6-201ENST00000266679 LINC00308Q8TCZ7 52 aa9.07□□□□□ -0.96
CPSF6-201ENST00000266679 H7C423 109 aa9.06□□□□□ -0.96
CPSF6-201ENST00000266679 CHCHD5Q9BSY4 110 aa9.06□□□□□ -0.96
CPSF6-201ENST00000266679 IGLV4-60A0A075B6I1 120 aa9.05□□□□□ -0.96
CPSF6-201ENST00000266679 TRBV6-8A0A0A6YYG3 113 aa9.05□□□□□ -0.96
CPSF6-201ENST00000266679 WIPF1O43516 503 aa9.05□□□□□ -0.96
CPSF6-201ENST00000266679 RNF183Q96D59 192 aa9.05□□□□□ -0.96
CPSF6-201ENST00000266679 SOSTDC1Q6X4U4 206 aa9.05□□□□□ -0.96
CPSF6-201ENST00000266679 CLEC2BQ92478 149 aa9.05□□□□□ -0.96
CPSF6-201ENST00000266679 COX6CP09669 75 aa9.03□□□□□ -0.96
CPSF6-201ENST00000266679 KIR2DL5BQ8NHK3 375 aa9.03□□□□□ -0.96
CPSF6-201ENST00000266679 CDIP1Q9H305 208 aa9.03□□□□□ -0.96
CPSF6-201ENST00000266679 X6R8D5 127 aa9.03□□□□□ -0.96
CPSF6-201ENST00000266679 M0QXV9 152 aa9.03□□□□□ -0.96
CPSF6-201ENST00000266679 GYPEP15421 78 aa9.03□□□□□ -0.96
CPSF6-201ENST00000266679 TOMM7Q9P0U1 55 aa9.03□□□□□ -0.96
CPSF6-201ENST00000266679 HERV-K104P63124 156 aa9.02□□□□□ -0.97
CPSF6-201ENST00000266679 LINC00612Q8N6U2 182 aa9.02□□□□□ -0.97
CPSF6-201ENST00000266679 COX7B2Q8TF08 81 aa9.02□□□□□ -0.97
CPSF6-201ENST00000266679 NTN5Q8WTR8 489 aaPredicted RBP9.02□□□□□ -0.97
CPSF6-201ENST00000266679 TRBV10-2A0A0K0K1G8 114 aa9.01□□□□□ -0.97
CPSF6-201ENST00000266679 C9orf66Q5T8R8 295 aa9.01□□□□□ -0.97
CPSF6-201ENST00000266679 COPS9Q8WXC6 57 aa9.01□□□□□ -0.97
CPSF6-201ENST00000266679 CITED1Q99966 193 aa9□□□□□ -0.97
CPSF6-201ENST00000266679 A0A096LPF7 62 aa9□□□□□ -0.97
CPSF6-201ENST00000266679 FAM222AQ5U5X8 452 aa8.99□□□□□ -0.97
CPSF6-201ENST00000266679 LST1O00453 97 aa8.99□□□□□ -0.97
CPSF6-201ENST00000266679 DEFB4AO15263 64 aa8.99□□□□□ -0.97
CPSF6-201ENST00000266679 SCGB1A1P11684 91 aa8.99□□□□□ -0.97
CPSF6-201ENST00000266679 DEFB135Q30KP9 77 aa8.99□□□□□ -0.97
CPSF6-201ENST00000266679 C2orf82Q6UX34 121 aa8.99□□□□□ -0.97
CPSF6-201ENST00000266679 C5orf38Q86SI9 138 aa8.99□□□□□ -0.97
CPSF6-201ENST00000266679 TMEM262E9PQX1 116 aa8.98□□□□□ -0.97
CPSF6-201ENST00000266679 IGHV3OR16-9A0A0B4J2B5 98 aa8.97□□□□□ -0.97
CPSF6-201ENST00000266679 SMIM9A6NGZ8 99 aa8.97□□□□□ -0.97
CPSF6-201ENST00000266679 TEX49A0A1B0GTD5 131 aa8.97□□□□□ -0.97
CPSF6-201ENST00000266679 LINC00959A0A1B0GUT2 108 aa8.97□□□□□ -0.97
CPSF6-201ENST00000266679 MT-ATP8P03928 68 aa8.97□□□□□ -0.97
CPSF6-201ENST00000266679 XGP55808 180 aa8.97□□□□□ -0.97
CPSF6-201ENST00000266679 CLPSL2Q6UWE3 100 aa8.97□□□□□ -0.97
CPSF6-201ENST00000266679 MIR7-3HGQ8N6C7 128 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms