RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 RPL36ALQ969Q0 106 aaKnown RBP11.97□□□□□ -0.49
SQLE-201ENST00000265896 HELZ2Q9BYK8 2649 aaKnown RBP11.97□□□□□ -0.49
SQLE-201ENST00000265896 PFN2P35080 140 aa11.96□□□□□ -0.5
SQLE-201ENST00000265896 DSCR9P59020 149 aa11.95□□□□□ -0.5
SQLE-201ENST00000265896 UBE2L6O14933 153 aa11.95□□□□□ -0.5
SQLE-201ENST00000265896 IFITM1P13164 125 aa11.95□□□□□ -0.5
SQLE-201ENST00000265896 C4orf3Q8WVX3 66 aa11.95□□□□□ -0.5
SQLE-201ENST00000265896 WFDC11Q8NEX6 87 aa11.94□□□□□ -0.5
SQLE-201ENST00000265896 YAE1D1Q9NRH1 226 aa11.94□□□□□ -0.5
SQLE-201ENST00000265896 K7EQD1 137 aa11.94□□□□□ -0.5
SQLE-201ENST00000265896 C5orf38Q86SI9 138 aa11.94□□□□□ -0.5
SQLE-201ENST00000265896 J3QLI3 93 aa11.93□□□□□ -0.5
SQLE-201ENST00000265896 HERVK_113P63121 156 aa11.93□□□□□ -0.5
SQLE-201ENST00000265896 CCL24O00175 119 aa11.93□□□□□ -0.5
SQLE-201ENST00000265896 DEFB130BP0DP73 79 aa11.93□□□□□ -0.5
SQLE-201ENST00000265896 DEFB130AP0DP74 79 aa11.93□□□□□ -0.5
SQLE-201ENST00000265896 BEAN1Q3B7T3 259 aa11.93□□□□□ -0.5
SQLE-201ENST00000265896 IGLV4-60A0A075B6I1 120 aa11.92□□□□□ -0.5
SQLE-201ENST00000265896 ATP5G1P05496 136 aa11.92□□□□□ -0.5
SQLE-201ENST00000265896 ESM1Q9NQ30 184 aa11.92□□□□□ -0.5
SQLE-201ENST00000265896 TENM1Q9UKZ4 2725 aa11.92□□□□□ -0.5
SQLE-201ENST00000265896 DAZ2Q13117 558 aaKnown RBP11.92□□□□□ -0.5
SQLE-201ENST00000265896 DAZ4Q86SG3 579 aaKnown RBP11.92□□□□□ -0.5
SQLE-201ENST00000265896 MIR7-3HGQ8N6C7 128 aa11.92□□□□□ -0.5
SQLE-201ENST00000265896 DAZ3Q9NR90 486 aaKnown RBP11.92□□□□□ -0.5
SQLE-201ENST00000265896 CDC42SE2Q9NRR3 84 aa11.92□□□□□ -0.5
SQLE-201ENST00000265896 LINC00158P58513 81 aa11.91□□□□□ -0.5
SQLE-201ENST00000265896 TIRAPP58753 221 aa11.91□□□□□ -0.5
SQLE-201ENST00000265896 RNF152Q8N8N0 203 aa11.91□□□□□ -0.5
SQLE-201ENST00000265896 FSHBP01225 129 aa11.9□□□□□ -0.5
SQLE-201ENST00000265896 TRGV4A0A0C4DH28 118 aa11.9□□□□□ -0.5
SQLE-201ENST00000265896 IGLV5-39A0A0G2JS06 123 aa11.9□□□□□ -0.5
SQLE-201ENST00000265896 C9orf129Q5T035 196 aaKnown RBP11.9□□□□□ -0.5
SQLE-201ENST00000265896 SMCR5Q8TEV8 140 aa11.9□□□□□ -0.5
SQLE-201ENST00000265896 DNAJC9-AS1A6NH13 148 aa11.89□□□□□ -0.51
SQLE-201ENST00000265896 BAALC-AS2P0C853 105 aa11.89□□□□□ -0.51
SQLE-201ENST00000265896 DNAJC30Q96LL9 226 aa11.89□□□□□ -0.51
SQLE-201ENST00000265896 EDA2RQ9HAV5 297 aa11.89□□□□□ -0.51
SQLE-201ENST00000265896 F5H768 121 aa11.89□□□□□ -0.51
SQLE-201ENST00000265896 H3BT86 120 aa11.89□□□□□ -0.51
SQLE-201ENST00000265896 ATRQ13535 2644 aa11.88□□□□□ -0.51
SQLE-201ENST00000265896 IGLV5-45A0A087WSX0 123 aa11.88□□□□□ -0.51
SQLE-201ENST00000265896 A8MTW9 85 aa11.88□□□□□ -0.51
SQLE-201ENST00000265896 SLPIP03973 132 aa11.88□□□□□ -0.51
SQLE-201ENST00000265896 GIG44P09565 113 aaPredicted RBP11.88□□□□□ -0.51
SQLE-201ENST00000265896 DEFB113Q30KQ7 82 aa11.88□□□□□ -0.51
SQLE-201ENST00000265896 TRRAPQ9Y4A5 3859 aa11.88□□□□□ -0.51
SQLE-201ENST00000265896 LINC00337Q8N6G1 96 aa11.88□□□□□ -0.51
SQLE-201ENST00000265896 COX7A2LO14548 114 aa11.87□□□□□ -0.51
SQLE-201ENST00000265896 GAGE2AQ6NT46 116 aa11.87□□□□□ -0.51
SQLE-201ENST00000265896 OR13C6PQ8NH95 151 aa11.87□□□□□ -0.51
SQLE-201ENST00000265896 TMEM243Q9BU79 118 aa11.87□□□□□ -0.51
SQLE-201ENST00000265896 DEFB4AO15263 64 aa11.86□□□□□ -0.51
SQLE-201ENST00000265896 FAM236AA0A1B0GUQ0 79 aa11.85□□□□□ -0.51
SQLE-201ENST00000265896 FAM236BA0A1B0GV22 79 aa11.85□□□□□ -0.51
SQLE-201ENST00000265896 PRR3P79522 188 aaKnown RBP11.85□□□□□ -0.51
SQLE-201ENST00000265896 TEP1Q99973 2627 aaKnown RBP11.85□□□□□ -0.51
SQLE-201ENST00000265896 A0A087WYN8 130 aa11.85□□□□□ -0.51
SQLE-201ENST00000265896 XCL1P47992 114 aa11.85□□□□□ -0.51
SQLE-201ENST00000265896 SND1-IT1Q9HBX3 110 aa11.85□□□□□ -0.51
SQLE-201ENST00000265896 PDZD2O15018 2839 aa11.84□□□□□ -0.51
SQLE-201ENST00000265896 M0QXV9 152 aa11.83□□□□□ -0.52
SQLE-201ENST00000265896 TIMM17BO60830 172 aa11.83□□□□□ -0.52
SQLE-201ENST00000265896 UNC79Q9P2D8 2635 aa11.83□□□□□ -0.52
SQLE-201ENST00000265896 IGKV2-28A0A075B6P5 120 aa11.82□□□□□ -0.52
SQLE-201ENST00000265896 PAX4O43316 350 aa11.82□□□□□ -0.52
SQLE-201ENST00000265896 IGKV2D-28P01615 120 aa11.82□□□□□ -0.52
SQLE-201ENST00000265896 Q8N3U1 123 aa11.82□□□□□ -0.52
SQLE-201ENST00000265896 COX7B2Q8TF08 81 aa11.82□□□□□ -0.52
SQLE-201ENST00000265896 PLAC8L1A1L4L8 177 aa11.82□□□□□ -0.52
SQLE-201ENST00000265896 CRPP02741 224 aa11.82□□□□□ -0.52
SQLE-201ENST00000265896 SHISA2Q6UWI4 295 aa11.82□□□□□ -0.52
SQLE-201ENST00000265896 C22orf24Q9Y442 160 aa11.82□□□□□ -0.52
SQLE-201ENST00000265896 OTOGQ6ZRI0 2925 aa11.81□□□□□ -0.52
SQLE-201ENST00000265896 SMIM20Q8N5G0 67 aa11.81□□□□□ -0.52
SQLE-201ENST00000265896 C14orf132Q9NPU4 83 aa11.81□□□□□ -0.52
SQLE-201ENST00000265896 IGLV10-54A0A075B6I4 117 aa11.81□□□□□ -0.52
SQLE-201ENST00000265896 SMIM11BQ8TCY0 68 aa11.8□□□□□ -0.52
SQLE-201ENST00000265896 PKD1L1Q8TDX9 2849 aa11.8□□□□□ -0.52
SQLE-201ENST00000265896 RNASE1P07998 156 aaKnown RBP11.79□□□□□ -0.52
SQLE-201ENST00000265896 CCL18P55774 89 aa11.79□□□□□ -0.52
SQLE-201ENST00000265896 IL17DQ8TAD2 202 aa11.79□□□□□ -0.52
SQLE-201ENST00000265896 ANK3Q12955 4377 aaKnown RBP11.78□□□□□ -0.52
SQLE-201ENST00000265896 KRTAP1-3Q8IUG1 177 aa11.78□□□□□ -0.52
SQLE-201ENST00000265896 TRBV10-1A0A0K0K1A3 114 aa11.77□□□□□ -0.52
SQLE-201ENST00000265896 LECT2O14960 151 aa11.77□□□□□ -0.52
SQLE-201ENST00000265896 LINC01006Q8NI28 216 aa11.77□□□□□ -0.52
SQLE-201ENST00000265896 HIVEP1P15822 2718 aa11.77□□□□□ -0.52
SQLE-201ENST00000265896 IGKV3D-7A0A0C4DH55 119 aa11.77□□□□□ -0.53
SQLE-201ENST00000265896 NCR3O14931 201 aa11.77□□□□□ -0.53
SQLE-201ENST00000265896 SMR3AQ99954 134 aa11.77□□□□□ -0.53
SQLE-201ENST00000265896 ZNF843Q8N446 348 aa11.76□□□□□ -0.53
SQLE-201ENST00000265896 LINC00526Q96FQ7 95 aa11.76□□□□□ -0.53
SQLE-201ENST00000265896 C6orf226Q5I0X4 101 aa11.76□□□□□ -0.53
SQLE-201ENST00000265896 SDIM1Q6ZPB5 146 aa11.76□□□□□ -0.53
SQLE-201ENST00000265896 DNAL4O96015 105 aa11.76□□□□□ -0.53
SQLE-201ENST00000265896 TRBV6-8A0A0A6YYG3 113 aa11.75□□□□□ -0.53
SQLE-201ENST00000265896 C9orf116Q5BN46 136 aaPredicted RBP11.75□□□□□ -0.53
SQLE-201ENST00000265896 FHL2Q14192 279 aa11.74□□□□□ -0.53
SQLE-201ENST00000265896 SPATA3Q8NHX4 192 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms