RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 KPRPQ5T749 579 aaPredicted RBP10.91□□□□□ -0.66
VPS26A-201ENST00000263559 SMIM1B2RUZ4 78 aa10.9□□□□□ -0.67
VPS26A-201ENST00000263559 MRAPQ8TCY5 172 aa10.9□□□□□ -0.67
VPS26A-201ENST00000263559 NDUFA12Q9UI09 145 aa10.9□□□□□ -0.67
VPS26A-201ENST00000263559 IGLV5-39A0A0G2JS06 123 aa10.89□□□□□ -0.67
VPS26A-201ENST00000263559 SH2D6Q7Z4S9 175 aa10.89□□□□□ -0.67
VPS26A-201ENST00000263559 SPANXB1Q9NS25 103 aaPredicted RBP10.89□□□□□ -0.67
VPS26A-201ENST00000263559 NHP2Q9NX24 153 aaKnown RBP10.89□□□□□ -0.67
VPS26A-201ENST00000263559 A0A0J9YXY3 114 aa10.89□□□□□ -0.67
VPS26A-201ENST00000263559 MGAM2Q2M2H8 2515 aa10.89□□□□□ -0.67
VPS26A-201ENST00000263559 NANOS2P60321 138 aaKnown RBP10.88□□□□□ -0.67
VPS26A-201ENST00000263559 ZFAND6Q6FIF0 208 aa10.88□□□□□ -0.67
VPS26A-201ENST00000263559 RAB37Q96AX2 223 aa10.88□□□□□ -0.67
VPS26A-201ENST00000263559 SPATA25Q9BR10 227 aa10.88□□□□□ -0.67
VPS26A-201ENST00000263559 LINC00959A0A1B0GUT2 108 aa10.88□□□□□ -0.67
VPS26A-201ENST00000263559 SMIM13P0DJ93 91 aa10.88□□□□□ -0.67
VPS26A-201ENST00000263559 Q8N3U1 123 aa10.88□□□□□ -0.67
VPS26A-201ENST00000263559 C11orf45Q8TAV5 145 aa10.88□□□□□ -0.67
VPS26A-201ENST00000263559 K7ERJ3 54 aa10.87□□□□□ -0.67
VPS26A-201ENST00000263559 TM2D3Q9BRN9 247 aa10.87□□□□□ -0.67
VPS26A-201ENST00000263559 LELP1Q5T871 98 aa10.87□□□□□ -0.67
VPS26A-201ENST00000263559 IGHV3-30P01768 117 aa10.86□□□□□ -0.67
VPS26A-201ENST00000263559 IGHV3-30-5P0DP03 117 aa10.86□□□□□ -0.67
VPS26A-201ENST00000263559 H3BNG1 76 aa10.86□□□□□ -0.67
VPS26A-201ENST00000263559 CLPSL2Q6UWE3 100 aa10.86□□□□□ -0.67
VPS26A-201ENST00000263559 LYPD5Q6UWN5 251 aa10.86□□□□□ -0.67
VPS26A-201ENST00000263559 IGHV3OR16-9A0A0B4J2B5 98 aa10.85□□□□□ -0.67
VPS26A-201ENST00000263559 C9orf118A6NHY6 69 aa10.84□□□□□ -0.67
VPS26A-201ENST00000263559 LINC00269Q8N2A0 174 aa10.84□□□□□ -0.67
VPS26A-201ENST00000263559 NAA38Q9BRA0 125 aaKnown RBP10.84□□□□□ -0.67
VPS26A-201ENST00000263559 NDUFA1O15239 70 aa10.84□□□□□ -0.67
VPS26A-201ENST00000263559 LITAFQ99732 161 aa10.84□□□□□ -0.67
VPS26A-201ENST00000263559 DEFB131BA0A096LNP1 70 aa10.83□□□□□ -0.68
VPS26A-201ENST00000263559 TMEM238C9JI98 176 aa10.83□□□□□ -0.68
VPS26A-201ENST00000263559 H3BUT2 72 aa10.83□□□□□ -0.68
VPS26A-201ENST00000263559 ANGP03950 147 aaKnown RBP10.83□□□□□ -0.68
VPS26A-201ENST00000263559 SS18Q15532 418 aa10.83□□□□□ -0.68
VPS26A-201ENST00000263559 HUWE1Q7Z6Z7 4374 aaKnown RBP10.83□□□□□ -0.68
VPS26A-201ENST00000263559 Q9H8V8 135 aa10.82□□□□□ -0.68
VPS26A-201ENST00000263559 CCL25O15444 150 aa10.82□□□□□ -0.68
VPS26A-201ENST00000263559 VAMP3Q15836 100 aa10.82□□□□□ -0.68
VPS26A-201ENST00000263559 ADAMTSL4-AS1Q5T5F5 129 aa10.82□□□□□ -0.68
VPS26A-201ENST00000263559 C5orf38Q86SI9 138 aa10.82□□□□□ -0.68
VPS26A-201ENST00000263559 A0A1B0GWB2 263 aa10.81□□□□□ -0.68
VPS26A-201ENST00000263559 XCL1P47992 114 aa10.81□□□□□ -0.68
VPS26A-201ENST00000263559 A0A087WZ39 114 aa10.81□□□□□ -0.68
VPS26A-201ENST00000263559 TMEM238LA0A1B0GVL6 79 aa10.81□□□□□ -0.68
VPS26A-201ENST00000263559 A6NJY4 79 aa10.81□□□□□ -0.68
VPS26A-201ENST00000263559 REG3AQ06141 175 aa10.81□□□□□ -0.68
VPS26A-201ENST00000263559 MUSTN1Q8IVN3 82 aa10.81□□□□□ -0.68
VPS26A-201ENST00000263559 ZNF625Q96I27 306 aaPredicted RBP10.8□□□□□ -0.68
VPS26A-201ENST00000263559 COX7B2Q8TF08 81 aa10.79□□□□□ -0.68
VPS26A-201ENST00000263559 TOMM7Q9P0U1 55 aa10.79□□□□□ -0.68
VPS26A-201ENST00000263559 SPANXDQ9BXN6 97 aa10.78□□□□□ -0.68
VPS26A-201ENST00000263559 SPANXCQ9NY87 97 aa10.78□□□□□ -0.68
VPS26A-201ENST00000263559 IGLV10-54A0A075B6I4 117 aa10.78□□□□□ -0.68
VPS26A-201ENST00000263559 APOMO95445 188 aa10.78□□□□□ -0.68
VPS26A-201ENST00000263559 PRSS2P07478 247 aa10.78□□□□□ -0.68
VPS26A-201ENST00000263559 UBE2V1Q13404 147 aa10.78□□□□□ -0.68
VPS26A-201ENST00000263559 A4D1N5 150 aa10.77□□□□□ -0.69
VPS26A-201ENST00000263559 IGLL5B9A064 214 aa10.77□□□□□ -0.69
VPS26A-201ENST00000263559 TIMM17BO60830 172 aa10.77□□□□□ -0.69
VPS26A-201ENST00000263559 ESRGQ1W209 222 aa10.77□□□□□ -0.69
VPS26A-201ENST00000263559 CFC1BP0CG36 223 aa10.77□□□□□ -0.69
VPS26A-201ENST00000263559 CFC1P0CG37 223 aa10.77□□□□□ -0.69
VPS26A-201ENST00000263559 CHCHD10Q8WYQ3 142 aaPredicted RBP10.77□□□□□ -0.69
VPS26A-201ENST00000263559 A0A1W2PPM0 123 aa10.76□□□□□ -0.69
VPS26A-201ENST00000263559 MIAQ16674 131 aa10.76□□□□□ -0.69
VPS26A-201ENST00000263559 WFDC10BQ8IUB3 73 aa10.76□□□□□ -0.69
VPS26A-201ENST00000263559 KLK12Q9UKR0 248 aa10.76□□□□□ -0.69
VPS26A-201ENST00000263559 IGHV3-33P01772 117 aa10.76□□□□□ -0.69
VPS26A-201ENST00000263559 RPL24P83731 157 aaKnown RBP10.76□□□□□ -0.69
VPS26A-201ENST00000263559 DAND5Q8N907 189 aa10.76□□□□□ -0.69
VPS26A-201ENST00000263559 NPC2P61916 151 aa10.75□□□□□ -0.69
VPS26A-201ENST00000263559 CIRBPQ14011 172 aaKnown RBP10.75□□□□□ -0.69
VPS26A-201ENST00000263559 CD164L2Q6UWJ8 174 aa10.75□□□□□ -0.69
VPS26A-201ENST00000263559 TRAV10A0A0B4J240 114 aa10.75□□□□□ -0.69
VPS26A-201ENST00000263559 A0A0U1RRA0 63 aa10.75□□□□□ -0.69
VPS26A-201ENST00000263559 HERV-K104P63124 156 aa10.75□□□□□ -0.69
VPS26A-201ENST00000263559 PRR34Q9NV39 138 aa10.74□□□□□ -0.69
VPS26A-201ENST00000263559 EIF4EBP3O60516 100 aaPredicted RBP10.73□□□□□ -0.69
VPS26A-201ENST00000263559 MEIG1Q5JSS6 88 aa10.73□□□□□ -0.69
VPS26A-201ENST00000263559 ENHOQ6UWT2 76 aa10.73□□□□□ -0.69
VPS26A-201ENST00000263559 PGPEP1Q9NXJ5 209 aa10.73□□□□□ -0.69
VPS26A-201ENST00000263559 LINC01561Q8N1V8 128 aa10.72□□□□□ -0.69
VPS26A-201ENST00000263559 GAGE10A6NGK3 116 aa10.72□□□□□ -0.69
VPS26A-201ENST00000263559 FABP2P12104 132 aa10.72□□□□□ -0.69
VPS26A-201ENST00000263559 COX7A2LO14548 114 aa10.71□□□□□ -0.69
VPS26A-201ENST00000263559 DNAH9Q9NYC9 4486 aa10.71□□□□□ -0.69
VPS26A-201ENST00000263559 FOXI1Q12951 378 aa10.71□□□□□ -0.69
VPS26A-201ENST00000263559 C6orf226Q5I0X4 101 aa10.71□□□□□ -0.69
VPS26A-201ENST00000263559 IFITM1P13164 125 aa10.71□□□□□ -0.7
VPS26A-201ENST00000263559 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.7□□□□□ -0.7
VPS26A-201ENST00000263559 TSPAN13O95857 204 aa10.7□□□□□ -0.7
VPS26A-201ENST00000263559 PRO1854Q9UHT4 67 aa10.7□□□□□ -0.7
VPS26A-201ENST00000263559 SPCS1Q9Y6A9 102 aa10.7□□□□□ -0.7
VPS26A-201ENST00000263559 GAGE12HA6NDE8 117 aa10.7□□□□□ -0.7
VPS26A-201ENST00000263559 K7EP34 96 aa10.7□□□□□ -0.7
VPS26A-201ENST00000263559 LINC00308Q8TCZ7 52 aa10.7□□□□□ -0.7
VPS26A-201ENST00000263559 UBE2WQ96B02 151 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms