RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 Q9HAA7 133 aa6.51□□□□□ -1.37
MSH4-201ENST00000263187 SMIM1B2RUZ4 78 aa6.51□□□□□ -1.37
MSH4-201ENST00000263187 CCL24O00175 119 aa6.51□□□□□ -1.37
MSH4-201ENST00000263187 UBE2L6O14933 153 aa6.51□□□□□ -1.37
MSH4-201ENST00000263187 A0A096LPF7 62 aa6.51□□□□□ -1.37
MSH4-201ENST00000263187 K7EQD1 137 aa6.5□□□□□ -1.37
MSH4-201ENST00000263187 NDUFA1O15239 70 aa6.5□□□□□ -1.37
MSH4-201ENST00000263187 FSHBP01225 129 aa6.5□□□□□ -1.37
MSH4-201ENST00000263187 DEFB113Q30KQ7 82 aa6.5□□□□□ -1.37
MSH4-201ENST00000263187 ESM1Q9NQ30 184 aa6.5□□□□□ -1.37
MSH4-201ENST00000263187 LST1O00453 97 aa6.5□□□□□ -1.37
MSH4-201ENST00000263187 BEAN1Q3B7T3 259 aa6.5□□□□□ -1.37
MSH4-201ENST00000263187 CLPSL2Q6UWE3 100 aa6.5□□□□□ -1.37
MSH4-201ENST00000263187 RNF152Q8N8N0 203 aa6.5□□□□□ -1.37
MSH4-201ENST00000263187 YAE1D1Q9NRH1 226 aa6.5□□□□□ -1.37
MSH4-201ENST00000263187 DNAJC9-AS1A6NH13 148 aa6.49□□□□□ -1.37
MSH4-201ENST00000263187 CCDC179H3BU77 68 aa6.49□□□□□ -1.37
MSH4-201ENST00000263187 DEFB130BP0DP73 79 aa6.49□□□□□ -1.37
MSH4-201ENST00000263187 DEFB130AP0DP74 79 aa6.49□□□□□ -1.37
MSH4-201ENST00000263187 PFN2P35080 140 aa6.49□□□□□ -1.37
MSH4-201ENST00000263187 HERVK_113P63121 156 aa6.49□□□□□ -1.37
MSH4-201ENST00000263187 CITED1Q99966 193 aa6.49□□□□□ -1.37
MSH4-201ENST00000263187 NHLRC4P0CG21 123 aaPredicted RBP6.49□□□□□ -1.37
MSH4-201ENST00000263187 C5orf38Q86SI9 138 aa6.49□□□□□ -1.37
MSH4-201ENST00000263187 DNAJC30Q96LL9 226 aa6.49□□□□□ -1.37
MSH4-201ENST00000263187 TRGV4A0A0C4DH28 118 aa6.48□□□□□ -1.37
MSH4-201ENST00000263187 NDUFV3P56181 108 aaKnown RBP6.48□□□□□ -1.37
MSH4-201ENST00000263187 CDC42SE2Q9NRR3 84 aa6.48□□□□□ -1.37
MSH4-201ENST00000263187 TIRAPP58753 221 aa6.48□□□□□ -1.37
MSH4-201ENST00000263187 FAM218AQ96MZ4 157 aa6.48□□□□□ -1.37
MSH4-201ENST00000263187 CHCHD5Q9BSY4 110 aa6.48□□□□□ -1.37
MSH4-201ENST00000263187 IGLV4-60A0A075B6I1 120 aa6.47□□□□□ -1.37
MSH4-201ENST00000263187 LINC00158P58513 81 aa6.47□□□□□ -1.37
MSH4-201ENST00000263187 EDA2RQ9HAV5 297 aa6.47□□□□□ -1.37
MSH4-201ENST00000263187 TENM1Q9UKZ4 2725 aa6.47□□□□□ -1.37
MSH4-201ENST00000263187 A8MTW9 85 aa6.47□□□□□ -1.37
MSH4-201ENST00000263187 MIR7-3HGQ8N6C7 128 aa6.47□□□□□ -1.37
MSH4-201ENST00000263187 IGLV5-39A0A0G2JS06 123 aa6.46□□□□□ -1.37
MSH4-201ENST00000263187 GIG44P09565 113 aaPredicted RBP6.46□□□□□ -1.37
MSH4-201ENST00000263187 IFITM1P13164 125 aa6.46□□□□□ -1.37
MSH4-201ENST00000263187 TMEM243Q9BU79 118 aa6.46□□□□□ -1.37
MSH4-201ENST00000263187 ATRQ13535 2644 aa6.46□□□□□ -1.38
MSH4-201ENST00000263187 ATP5G1P05496 136 aa6.46□□□□□ -1.38
MSH4-201ENST00000263187 IGLV5-45A0A087WSX0 123 aa6.45□□□□□ -1.38
MSH4-201ENST00000263187 F5H768 121 aa6.45□□□□□ -1.38
MSH4-201ENST00000263187 DAZ2Q13117 558 aaKnown RBP6.45□□□□□ -1.38
MSH4-201ENST00000263187 DAZ4Q86SG3 579 aaKnown RBP6.45□□□□□ -1.38
MSH4-201ENST00000263187 DAZ3Q9NR90 486 aaKnown RBP6.45□□□□□ -1.38
MSH4-201ENST00000263187 DEFB4AO15263 64 aa6.45□□□□□ -1.38
MSH4-201ENST00000263187 BAALC-AS2P0C853 105 aa6.45□□□□□ -1.38
MSH4-201ENST00000263187 UNC79Q9P2D8 2635 aa6.45□□□□□ -1.38
MSH4-201ENST00000263187 TRRAPQ9Y4A5 3859 aa6.45□□□□□ -1.38
MSH4-201ENST00000263187 H3BT86 120 aa6.45□□□□□ -1.38
MSH4-201ENST00000263187 OR13C6PQ8NH95 151 aa6.45□□□□□ -1.38
MSH4-201ENST00000263187 COX7A2LO14548 114 aa6.44□□□□□ -1.38
MSH4-201ENST00000263187 XCL1P47992 114 aa6.44□□□□□ -1.38
MSH4-201ENST00000263187 LINC00337Q8N6G1 96 aa6.44□□□□□ -1.38
MSH4-201ENST00000263187 SLPIP03973 132 aa6.44□□□□□ -1.38
MSH4-201ENST00000263187 GAGE2AQ6NT46 116 aa6.44□□□□□ -1.38
MSH4-201ENST00000263187 TIMM17BO60830 172 aa6.43□□□□□ -1.38
MSH4-201ENST00000263187 KRTAP1-3Q8IUG1 177 aa6.43□□□□□ -1.38
MSH4-201ENST00000263187 COX7B2Q8TF08 81 aa6.43□□□□□ -1.38
MSH4-201ENST00000263187 SND1-IT1Q9HBX3 110 aa6.43□□□□□ -1.38
MSH4-201ENST00000263187 TEP1Q99973 2627 aaKnown RBP6.43□□□□□ -1.38
MSH4-201ENST00000263187 ANK3Q12955 4377 aaKnown RBP6.43□□□□□ -1.38
MSH4-201ENST00000263187 PRR3P79522 188 aaKnown RBP6.43□□□□□ -1.38
MSH4-201ENST00000263187 C9orf129Q5T035 196 aaKnown RBP6.43□□□□□ -1.38
MSH4-201ENST00000263187 LINC01006Q8NI28 216 aa6.43□□□□□ -1.38
MSH4-201ENST00000263187 SMCR5Q8TEV8 140 aa6.43□□□□□ -1.38
MSH4-201ENST00000263187 PLAC8L1A1L4L8 177 aa6.42□□□□□ -1.38
MSH4-201ENST00000263187 PAX4O43316 350 aa6.42□□□□□ -1.38
MSH4-201ENST00000263187 SMR3AQ99954 134 aa6.42□□□□□ -1.38
MSH4-201ENST00000263187 OTOGQ6ZRI0 2925 aa6.42□□□□□ -1.38
MSH4-201ENST00000263187 A0A087WYN8 130 aa6.42□□□□□ -1.38
MSH4-201ENST00000263187 M0QXV9 152 aa6.42□□□□□ -1.38
MSH4-201ENST00000263187 CRPP02741 224 aa6.42□□□□□ -1.38
MSH4-201ENST00000263187 IGLV10-54A0A075B6I4 117 aa6.42□□□□□ -1.38
MSH4-201ENST00000263187 Q8N3U1 123 aa6.42□□□□□ -1.38
MSH4-201ENST00000263187 BAHCC1Q9P281 2608 aa6.41□□□□□ -1.38
MSH4-201ENST00000263187 TRBV10-1A0A0K0K1A3 114 aa6.41□□□□□ -1.38
MSH4-201ENST00000263187 IL17DQ8TAD2 202 aa6.41□□□□□ -1.38
MSH4-201ENST00000263187 IGKV2-28A0A075B6P5 120 aa6.41□□□□□ -1.38
MSH4-201ENST00000263187 FAM236AA0A1B0GUQ0 79 aa6.41□□□□□ -1.38
MSH4-201ENST00000263187 FAM236BA0A1B0GV22 79 aa6.41□□□□□ -1.38
MSH4-201ENST00000263187 IGKV2D-28P01615 120 aa6.41□□□□□ -1.38
MSH4-201ENST00000263187 SHISA2Q6UWI4 295 aa6.41□□□□□ -1.38
MSH4-201ENST00000263187 LRRC75A-AS1Q8N1F1 130 aa6.41□□□□□ -1.38
MSH4-201ENST00000263187 RNASE1P07998 156 aaKnown RBP6.4□□□□□ -1.38
MSH4-201ENST00000263187 CCL18P55774 89 aa6.4□□□□□ -1.38
MSH4-201ENST00000263187 C6orf226Q5I0X4 101 aa6.4□□□□□ -1.38
MSH4-201ENST00000263187 SMIM11BQ8TCY0 68 aa6.4□□□□□ -1.38
MSH4-201ENST00000263187 C14orf132Q9NPU4 83 aa6.4□□□□□ -1.39
MSH4-201ENST00000263187 TRBV6-8A0A0A6YYG3 113 aa6.39□□□□□ -1.39
MSH4-201ENST00000263187 GYPEP15421 78 aa6.39□□□□□ -1.39
MSH4-201ENST00000263187 FHL2Q14192 279 aa6.39□□□□□ -1.39
MSH4-201ENST00000263187 LINC00482Q8N8I6 264 aa6.39□□□□□ -1.39
MSH4-201ENST00000263187 C16orf74Q96GX8 76 aa6.39□□□□□ -1.39
MSH4-201ENST00000263187 C22orf24Q9Y442 160 aa6.39□□□□□ -1.39
MSH4-201ENST00000263187 PKD1L1Q8TDX9 2849 aa6.39□□□□□ -1.39
MSH4-201ENST00000263187 LECT2O14960 151 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms