RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 A0A0J9YXV3 536 aa14.37□□□□□ -0.11
CCNE1-201ENST00000262643 GAGE6Q13070 117 aa14.37□□□□□ -0.11
CCNE1-201ENST00000262643 MRPL52Q86TS9 123 aaKnown RBP14.37□□□□□ -0.11
CCNE1-201ENST00000262643 PCP2Q8IVA1 136 aa14.37□□□□□ -0.11
CCNE1-201ENST00000262643 MRPS36P82909 103 aaKnown RBP14.37□□□□□ -0.11
CCNE1-201ENST00000262643 CHCHD5Q9BSY4 110 aa14.37□□□□□ -0.11
CCNE1-201ENST00000262643 Q6ZRN7 208 aaPredicted RBP14.36□□□□□ -0.11
CCNE1-201ENST00000262643 BOD1L2Q8IYS8 172 aa14.36□□□□□ -0.11
CCNE1-201ENST00000262643 K7EP13 123 aa14.36□□□□□ -0.11
CCNE1-201ENST00000262643 EREGO14944 169 aa14.36□□□□□ -0.11
CCNE1-201ENST00000262643 TMEM97Q5BJF2 176 aa14.36□□□□□ -0.11
CCNE1-201ENST00000262643 AMMECR1LQ6DCA0 310 aa14.36□□□□□ -0.11
CCNE1-201ENST00000262643 SNHG12Q9BXW3 62 aa14.36□□□□□ -0.11
CCNE1-201ENST00000262643 CSDC2Q9Y534 153 aaKnown RBP14.36□□□□□ -0.11
CCNE1-201ENST00000262643 M0R143 59 aa14.35□□□□□ -0.11
CCNE1-201ENST00000262643 LINC01556Q5JQF7 62 aa14.35□□□□□ -0.11
CCNE1-201ENST00000262643 IGHV3-30P01768 117 aa14.34□□□□□ -0.11
CCNE1-201ENST00000262643 IGHV3-33P01772 117 aa14.34□□□□□ -0.11
CCNE1-201ENST00000262643 IGHV3-30-3P0DP02 117 aa14.34□□□□□ -0.11
CCNE1-201ENST00000262643 IGHV3-30-5P0DP03 117 aa14.34□□□□□ -0.11
CCNE1-201ENST00000262643 NFE4Q86UQ8 179 aa14.34□□□□□ -0.11
CCNE1-201ENST00000262643 C10orf126Q8N4M7 172 aa14.34□□□□□ -0.11
CCNE1-201ENST00000262643 CHAC1Q9BUX1 264 aa14.34□□□□□ -0.11
CCNE1-201ENST00000262643 TTTY13Q9BZ97 58 aa14.34□□□□□ -0.11
CCNE1-201ENST00000262643 KIAA1109Q2LD37 5005 aa14.34□□□□□ -0.11
CCNE1-201ENST00000262643 H7C423 109 aa14.34□□□□□ -0.11
CCNE1-201ENST00000262643 TMEM170BQ5T4T1 132 aa14.34□□□□□ -0.11
CCNE1-201ENST00000262643 OR5A1Q8NGJ0 315 aa14.34□□□□□ -0.11
CCNE1-201ENST00000262643 CDC42SE2Q9NRR3 84 aa14.34□□□□□ -0.11
CCNE1-201ENST00000262643 DLEU1O43261 78 aa14.32□□□□□ -0.12
CCNE1-201ENST00000262643 C2orf91Q6ZV80 131 aa14.32□□□□□ -0.12
CCNE1-201ENST00000262643 Q8N3U1 123 aa14.32□□□□□ -0.12
CCNE1-201ENST00000262643 TMEM101Q96IK0 257 aa14.32□□□□□ -0.12
CCNE1-201ENST00000262643 C2orf88Q9BSF0 95 aa14.32□□□□□ -0.12
CCNE1-201ENST00000262643 HERC2O95714 4834 aa14.31□□□□□ -0.12
CCNE1-201ENST00000262643 IGLV4-60A0A075B6I1 120 aa14.31□□□□□ -0.12
CCNE1-201ENST00000262643 SMAGPQ0VAQ4 97 aa14.31□□□□□ -0.12
CCNE1-201ENST00000262643 E9PLD3 99 aa14.3□□□□□ -0.12
CCNE1-201ENST00000262643 UBE2D1P51668 147 aa14.3□□□□□ -0.12
CCNE1-201ENST00000262643 BATFQ16520 125 aa14.3□□□□□ -0.12
CCNE1-201ENST00000262643 TMEM262E9PQX1 116 aa14.29□□□□□ -0.12
CCNE1-201ENST00000262643 ZNF22P17026 224 aaPredicted RBP14.29□□□□□ -0.12
CCNE1-201ENST00000262643 HERVK_113P61574 105 aa14.29□□□□□ -0.12
CCNE1-201ENST00000262643 Q9HAA7 133 aa14.29□□□□□ -0.12
CCNE1-201ENST00000262643 TRAV13-1A0A0B4J241 112 aa14.28□□□□□ -0.12
CCNE1-201ENST00000262643 C16orf90A8MZG2 172 aa14.28□□□□□ -0.12
CCNE1-201ENST00000262643 ZNF25P17030 456 aaPredicted RBP14.28□□□□□ -0.12
CCNE1-201ENST00000262643 MAPKAPK5-AS1Q8N8E1 139 aa14.28□□□□□ -0.12
CCNE1-201ENST00000262643 IBA57-AS1B1ANH7 110 aa14.27□□□□□ -0.12
CCNE1-201ENST00000262643 HINT1P49773 126 aaPredicted RBP14.27□□□□□ -0.12
CCNE1-201ENST00000262643 TINCRA0A1B0GVN0 87 aa14.27□□□□□ -0.13
CCNE1-201ENST00000262643 COX6A2Q02221 97 aa14.26□□□□□ -0.13
CCNE1-201ENST00000262643 TMEM223A0PJW6 202 aa14.25□□□□□ -0.13
CCNE1-201ENST00000262643 KRTAP10-2P60368 255 aa14.25□□□□□ -0.13
CCNE1-201ENST00000262643 LBHQ53QV2 105 aaPredicted RBP14.25□□□□□ -0.13
CCNE1-201ENST00000262643 MPV17L2Q567V2 206 aa14.25□□□□□ -0.13
CCNE1-201ENST00000262643 DNAH5Q8TE73 4624 aa14.25□□□□□ -0.13
CCNE1-201ENST00000262643 LRP1BQ9NZR2 4599 aa14.25□□□□□ -0.13
CCNE1-201ENST00000262643 IGHV3-64A0A075B6Q5 118 aa14.24□□□□□ -0.13
CCNE1-201ENST00000262643 RBX1P62877 108 aa14.24□□□□□ -0.13
CCNE1-201ENST00000262643 LINC00242Q5T6M2 205 aa14.24□□□□□ -0.13
CCNE1-201ENST00000262643 GEMIN7Q9H840 131 aaKnown RBP14.24□□□□□ -0.13
CCNE1-201ENST00000262643 IGKV3OR2-268A0A0C4DH90 116 aa14.24□□□□□ -0.13
CCNE1-201ENST00000262643 PSCAO43653 123 aa14.24□□□□□ -0.13
CCNE1-201ENST00000262643 LINC00469Q8N7U9 141 aa14.23□□□□□ -0.13
CCNE1-201ENST00000262643 A0A1B0GUV1 79 aa14.22□□□□□ -0.13
CCNE1-201ENST00000262643 A0A087WTM6 91 aa14.22□□□□□ -0.13
CCNE1-201ENST00000262643 MYMXA0A1B0GTQ4 84 aa14.22□□□□□ -0.13
CCNE1-201ENST00000262643 CDKN2A-AS1Q9UH64 79 aa14.22□□□□□ -0.13
CCNE1-201ENST00000262643 FUSP35637 526 aaKnown RBP eCLIP14.21□□□□□ -0.13
CCNE1-201ENST00000262643 TSPEAR-AS2P59090 65 aa14.21□□□□□ -0.13
CCNE1-201ENST00000262643 FAM19A3Q7Z5A8 133 aa14.2□□□□□ -0.14
CCNE1-201ENST00000262643 TRAV8-3A0A0A6YYJ7 113 aa14.2□□□□□ -0.14
CCNE1-201ENST00000262643 HIGD1BQ9P298 99 aa14.2□□□□□ -0.14
CCNE1-201ENST00000262643 ZNF815PA8K554 130 aa14.19□□□□□ -0.14
CCNE1-201ENST00000262643 BVES-AS1Q5T3Y7 98 aa14.19□□□□□ -0.14
CCNE1-201ENST00000262643 SPINK8P0C7L1 97 aa14.19□□□□□ -0.14
CCNE1-201ENST00000262643 HERVK_113P63121 156 aa14.19□□□□□ -0.14
CCNE1-201ENST00000262643 KLK12Q9UKR0 248 aa14.19□□□□□ -0.14
CCNE1-201ENST00000262643 IGLV5-45A0A087WSX0 123 aa14.18□□□□□ -0.14
CCNE1-201ENST00000262643 J3QQQ9 107 aa14.18□□□□□ -0.14
CCNE1-201ENST00000262643 LEPROTO15243 131 aa14.18□□□□□ -0.14
CCNE1-201ENST00000262643 RYR1P21817 5038 aa14.17□□□□□ -0.14
CCNE1-201ENST00000262643 SEC11AP67812 179 aa14.17□□□□□ -0.14
CCNE1-201ENST00000262643 LGALS3P17931 250 aaKnown RBP14.17□□□□□ -0.14
CCNE1-201ENST00000262643 HSD52Q0P140 79 aa14.17□□□□□ -0.14
CCNE1-201ENST00000262643 CLPSL2Q6UWE3 100 aa14.17□□□□□ -0.14
CCNE1-201ENST00000262643 COL5A1-AS1Q5SY13 56 aa14.16□□□□□ -0.14
CCNE1-201ENST00000262643 IGHV1-58A0A0C4DH39 117 aa14.15□□□□□ -0.14
CCNE1-201ENST00000262643 LINC00959A0A1B0GUT2 108 aa14.15□□□□□ -0.14
CCNE1-201ENST00000262643 LINC00269Q8N2A0 174 aa14.15□□□□□ -0.14
CCNE1-201ENST00000262643 PLEKHB2Q96CS7 222 aa14.15□□□□□ -0.14
CCNE1-201ENST00000262643 TM2D2Q9BX73 214 aa14.15□□□□□ -0.14
CCNE1-201ENST00000262643 H3BRM9 83 aa14.14□□□□□ -0.15
CCNE1-201ENST00000262643 ANGP03950 147 aaKnown RBP14.14□□□□□ -0.15
CCNE1-201ENST00000262643 UBE2WQ96B02 151 aa14.14□□□□□ -0.15
CCNE1-201ENST00000262643 PGPEP1Q9NXJ5 209 aa14.14□□□□□ -0.15
CCNE1-201ENST00000262643 LRCOL1A6NCL2 159 aa14.14□□□□□ -0.15
CCNE1-201ENST00000262643 SCGB1D4Q6XE38 83 aa14.14□□□□□ -0.15
CCNE1-201ENST00000262643 A0A1B0GV90 55 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms