RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 IGLV4-3A0A075B6K6 122 aa9.12□□□□□ -0.95
SGCA-201ENST00000262018 HINT1P49773 126 aaPredicted RBP9.12□□□□□ -0.95
SGCA-201ENST00000262018 MPV17L2Q567V2 206 aa9.12□□□□□ -0.95
SGCA-201ENST00000262018 STPG4Q8N801 248 aa9.12□□□□□ -0.95
SGCA-201ENST00000262018 FAM104AQ969W3 186 aa9.12□□□□□ -0.95
SGCA-201ENST00000262018 TIMM21Q9BVV7 248 aa9.12□□□□□ -0.95
SGCA-201ENST00000262018 SPANXA1Q9NS26 97 aa9.12□□□□□ -0.95
SGCA-201ENST00000262018 UBE2D4Q9Y2X8 147 aa9.12□□□□□ -0.95
SGCA-201ENST00000262018 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.11□□□□□ -0.95
SGCA-201ENST00000262018 IGKV2-29A2NJV5 120 aaPredicted RBP9.11□□□□□ -0.95
SGCA-201ENST00000262018 E9PLD3 99 aa9.11□□□□□ -0.95
SGCA-201ENST00000262018 F5H768 121 aa9.11□□□□□ -0.95
SGCA-201ENST00000262018 C2orf91Q6ZV80 131 aa9.11□□□□□ -0.95
SGCA-201ENST00000262018 VPS13BQ7Z7G8 4022 aa9.1□□□□□ -0.95
SGCA-201ENST00000262018 C11orf86A6NJI1 115 aa9.1□□□□□ -0.95
SGCA-201ENST00000262018 GYPEP15421 78 aa9.1□□□□□ -0.95
SGCA-201ENST00000262018 NFE4Q86UQ8 179 aa9.1□□□□□ -0.95
SGCA-201ENST00000262018 LINC00469Q8N7U9 141 aa9.1□□□□□ -0.95
SGCA-201ENST00000262018 AMELXQ99217 191 aa9.1□□□□□ -0.95
SGCA-201ENST00000262018 OPRPNQ99935 248 aaPredicted RBP9.1□□□□□ -0.95
SGCA-201ENST00000262018 COX11Q9Y6N1 276 aa9.1□□□□□ -0.95
SGCA-201ENST00000262018 IGLV4-69A0A075B6H9 119 aa9.09□□□□□ -0.95
SGCA-201ENST00000262018 PAX4O43316 350 aa9.09□□□□□ -0.95
SGCA-201ENST00000262018 XGP55808 180 aa9.09□□□□□ -0.95
SGCA-201ENST00000262018 MRPS36P82909 103 aaKnown RBP9.09□□□□□ -0.95
SGCA-201ENST00000262018 VCX2Q9H322 139 aa9.09□□□□□ -0.95
SGCA-201ENST00000262018 H7C423 109 aa9.08□□□□□ -0.96
SGCA-201ENST00000262018 VSIG2Q96IQ7 327 aa9.08□□□□□ -0.96
SGCA-201ENST00000262018 TMEM243Q9BU79 118 aa9.08□□□□□ -0.96
SGCA-201ENST00000262018 CSDC2Q9Y534 153 aaKnown RBP9.08□□□□□ -0.96
SGCA-201ENST00000262018 TRBV25-1A0A075B6N4 114 aa9.07□□□□□ -0.96
SGCA-201ENST00000262018 ATP6V0E2Q8NHE4 81 aa9.07□□□□□ -0.96
SGCA-201ENST00000262018 TRBV6-8A0A0A6YYG3 113 aa9.06□□□□□ -0.96
SGCA-201ENST00000262018 MYMXA0A1B0GTQ4 84 aa9.06□□□□□ -0.96
SGCA-201ENST00000262018 Q6ZUT4 128 aa9.06□□□□□ -0.96
SGCA-201ENST00000262018 C15orf53Q8NAA6 179 aa9.06□□□□□ -0.96
SGCA-201ENST00000262018 TRAV26-1A0A087WT03 109 aa9.05□□□□□ -0.96
SGCA-201ENST00000262018 H3BNG1 76 aa9.05□□□□□ -0.96
SGCA-201ENST00000262018 H3BRM9 83 aa9.05□□□□□ -0.96
SGCA-201ENST00000262018 SMR3BP02814 79 aaPredicted RBP9.05□□□□□ -0.96
SGCA-201ENST00000262018 ZNF25P17030 456 aaPredicted RBP9.05□□□□□ -0.96
SGCA-201ENST00000262018 CHAC1Q9BUX1 264 aa9.05□□□□□ -0.96
SGCA-201ENST00000262018 TM2D2Q9BX73 214 aa9.05□□□□□ -0.96
SGCA-201ENST00000262018 TMEM238LA0A1B0GVL6 79 aa9.05□□□□□ -0.96
SGCA-201ENST00000262018 A6NJY4 79 aa9.05□□□□□ -0.96
SGCA-201ENST00000262018 DGAT2L7PQ6IED9 249 aa9.05□□□□□ -0.96
SGCA-201ENST00000262018 PCP2Q8IVA1 136 aa9.05□□□□□ -0.96
SGCA-201ENST00000262018 HMCN2Q8NDA2 5059 aa9.04□□□□□ -0.96
SGCA-201ENST00000262018 IGKV2D-26A0A0A0MRZ7 120 aa9.04□□□□□ -0.96
SGCA-201ENST00000262018 A0A0J9YY99 117 aa9.04□□□□□ -0.96
SGCA-201ENST00000262018 UBE2L6O14933 153 aa9.04□□□□□ -0.96
SGCA-201ENST00000262018 FUSP35637 526 aaKnown RBP eCLIP9.04□□□□□ -0.96
SGCA-201ENST00000262018 SERTAD4-AS1Q5TG53 156 aa9.04□□□□□ -0.96
SGCA-201ENST00000262018 A0A0J9YXV3 536 aa9.03□□□□□ -0.96
SGCA-201ENST00000262018 MRPL23Q16540 153 aaKnown RBP9.03□□□□□ -0.96
SGCA-201ENST00000262018 RNASE13Q5GAN3 156 aaKnown RBP9.03□□□□□ -0.96
SGCA-201ENST00000262018 SH2D6Q7Z4S9 175 aa9.03□□□□□ -0.96
SGCA-201ENST00000262018 PLEKHB2Q96CS7 222 aa9.03□□□□□ -0.96
SGCA-201ENST00000262018 TRAV8-6A0A0B4J262 113 aa9.02□□□□□ -0.97
SGCA-201ENST00000262018 FAM229AH3BQW9 127 aa9.02□□□□□ -0.97
SGCA-201ENST00000262018 UBE2D1P51668 147 aa9.02□□□□□ -0.97
SGCA-201ENST00000262018 CCL18P55774 89 aa9.02□□□□□ -0.97
SGCA-201ENST00000262018 AMMECR1LQ6DCA0 310 aa9.02□□□□□ -0.97
SGCA-201ENST00000262018 CEND1Q8N111 149 aa9.02□□□□□ -0.97
SGCA-201ENST00000262018 OR5A1Q8NGJ0 315 aa9.02□□□□□ -0.97
SGCA-201ENST00000262018 TMEM101Q96IK0 257 aa9.02□□□□□ -0.97
SGCA-201ENST00000262018 CDC42SE2Q9NRR3 84 aa9.02□□□□□ -0.97
SGCA-201ENST00000262018 TP73-AS1Q9UF72 201 aa9.02□□□□□ -0.97
SGCA-201ENST00000262018 LINC00588Q9Y4M8 146 aa9.02□□□□□ -0.97
SGCA-201ENST00000262018 ICOSQ9Y6W8 199 aa9.02□□□□□ -0.97
SGCA-201ENST00000262018 TINCRA0A1B0GVN0 87 aa9.01□□□□□ -0.97
SGCA-201ENST00000262018 ZNF22P17026 224 aaPredicted RBP9.01□□□□□ -0.97
SGCA-201ENST00000262018 GAGE6Q13070 117 aa9.01□□□□□ -0.97
SGCA-201ENST00000262018 FAM19A3Q7Z5A8 133 aa9.01□□□□□ -0.97
SGCA-201ENST00000262018 CHCHD5Q9BSY4 110 aa9.01□□□□□ -0.97
SGCA-201ENST00000262018 KRTAP1-5Q9BYS1 174 aa9.01□□□□□ -0.97
SGCA-201ENST00000262018 A0A096LPF7 62 aa9□□□□□ -0.97
SGCA-201ENST00000262018 TAX1BP3O14907 124 aa9□□□□□ -0.97
SGCA-201ENST00000262018 LEPROTO15243 131 aa9□□□□□ -0.97
SGCA-201ENST00000262018 SMIM13P0DJ93 91 aa9□□□□□ -0.97
SGCA-201ENST00000262018 UBE2V1Q13404 147 aa9□□□□□ -0.97
SGCA-201ENST00000262018 TMEM170BQ5T4T1 132 aa9□□□□□ -0.97
SGCA-201ENST00000262018 GTF2H5Q6ZYL4 71 aa9□□□□□ -0.97
SGCA-201ENST00000262018 SPANXB1Q9NS25 103 aaPredicted RBP9□□□□□ -0.97
SGCA-201ENST00000262018 PGPEP1Q9NXJ5 209 aa9□□□□□ -0.97
SGCA-201ENST00000262018 TMEM223A0PJW6 202 aa8.99□□□□□ -0.97
SGCA-201ENST00000262018 C9orf118A6NHY6 69 aa8.99□□□□□ -0.97
SGCA-201ENST00000262018 ZNF815PA8K554 130 aa8.99□□□□□ -0.97
SGCA-201ENST00000262018 LGALS3P17931 250 aaKnown RBP8.99□□□□□ -0.97
SGCA-201ENST00000262018 TIRAPP58753 221 aa8.99□□□□□ -0.97
SGCA-201ENST00000262018 TTC32Q5I0X7 151 aa8.99□□□□□ -0.97
SGCA-201ENST00000262018 SCGB1D4Q6XE38 83 aa8.99□□□□□ -0.97
SGCA-201ENST00000262018 Q9H8V8 135 aa8.99□□□□□ -0.97
SGCA-201ENST00000262018 PTTG1IPP53801 180 aa8.98□□□□□ -0.97
SGCA-201ENST00000262018 HIST1H4GQ99525 98 aa8.98□□□□□ -0.97
SGCA-201ENST00000262018 IGLV4-60A0A075B6I1 120 aa8.97□□□□□ -0.97
SGCA-201ENST00000262018 IGLV5-45A0A087WSX0 123 aa8.97□□□□□ -0.97
SGCA-201ENST00000262018 A0A1B0GUV1 79 aa8.97□□□□□ -0.97
SGCA-201ENST00000262018 J3QQQ9 107 aa8.97□□□□□ -0.97
SGCA-201ENST00000262018 KRTAP10-1P60331 282 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms