RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PLA2G2AP14555 144 aa8.82□□□□□ -1
COL8A1-201ENST00000261037 CRIP2P52943 208 aaPredicted RBP8.81□□□□□ -1
COL8A1-201ENST00000261037 ATP5EP2Q5VTU8 51 aa8.81□□□□□ -1
COL8A1-201ENST00000261037 DHRS4-AS1Q9P1J3 65 aa8.81□□□□□ -1
COL8A1-201ENST00000261037 KRTAP10-9P60411 292 aa8.81□□□□□ -1
COL8A1-201ENST00000261037 C2orf91Q6ZV80 131 aa8.81□□□□□ -1
COL8A1-201ENST00000261037 ZNF706Q9Y5V0 76 aaPredicted RBP8.81□□□□□ -1
COL8A1-201ENST00000261037 POM121L12Q8N7R1 296 aa8.8□□□□□ -1
COL8A1-201ENST00000261037 C9orf116Q5BN46 136 aaPredicted RBP8.79□□□□□ -1
COL8A1-201ENST00000261037 ZNF73O43830 326 aaPredicted RBP8.79□□□□□ -1
COL8A1-201ENST00000261037 TIMM17BO60830 172 aa8.79□□□□□ -1
COL8A1-201ENST00000261037 UBE2D2P62837 147 aa8.79□□□□□ -1
COL8A1-201ENST00000261037 CYSRT1A8MQ03 144 aa8.79□□□□□ -1
COL8A1-201ENST00000261037 BRI3O95415 125 aa8.79□□□□□ -1
COL8A1-201ENST00000261037 NDUFC2-KCTD14E9PQ53 114 aa8.78□□□□□ -1
COL8A1-201ENST00000261037 POLR2KP53803 58 aaKnown RBP8.78□□□□□ -1
COL8A1-201ENST00000261037 MRPS36P82909 103 aaKnown RBP8.78□□□□□ -1
COL8A1-201ENST00000261037 CDC42SE2Q9NRR3 84 aa8.78□□□□□ -1
COL8A1-201ENST00000261037 MRGPRG-AS1Q2M3A8 158 aa8.77□□□□□ -1
COL8A1-201ENST00000261037 TNCP24821 2201 aa8.77□□□□□ -1.01
COL8A1-201ENST00000261037 ATRXP46100 2492 aa8.77□□□□□ -1.01
COL8A1-201ENST00000261037 LST1O00453 97 aa8.77□□□□□ -1.01
COL8A1-201ENST00000261037 COX6A2Q02221 97 aa8.77□□□□□ -1.01
COL8A1-201ENST00000261037 SPG11Q96JI7 2443 aa8.77□□□□□ -1.01
COL8A1-201ENST00000261037 DSCAMO60469 2012 aa8.77□□□□□ -1.01
COL8A1-201ENST00000261037 UNQ6190/PRO20217Q6UXQ8 127 aa8.76□□□□□ -1.01
COL8A1-201ENST00000261037 RETNLBQ9BQ08 111 aa8.76□□□□□ -1.01
COL8A1-201ENST00000261037 M0QXV9 152 aa8.75□□□□□ -1.01
COL8A1-201ENST00000261037 PRR3P79522 188 aaKnown RBP8.75□□□□□ -1.01
COL8A1-201ENST00000261037 K7ERS5 55 aa8.75□□□□□ -1.01
COL8A1-201ENST00000261037 COX17Q14061 63 aa8.75□□□□□ -1.01
COL8A1-201ENST00000261037 ODF3L2Q3SX64 289 aa8.75□□□□□ -1.01
COL8A1-201ENST00000261037 Q8IZM0 81 aa8.75□□□□□ -1.01
COL8A1-201ENST00000261037 PRR15LQ9BU68 103 aa8.75□□□□□ -1.01
COL8A1-201ENST00000261037 CELA1Q9UNI1 258 aa8.74□□□□□ -1.01
COL8A1-201ENST00000261037 FAM19A3Q7Z5A8 133 aa8.74□□□□□ -1.01
COL8A1-201ENST00000261037 FAM240AA0A1B0GVK7 77 aa8.73□□□□□ -1.01
COL8A1-201ENST00000261037 CCDC179H3BU77 68 aa8.73□□□□□ -1.01
COL8A1-201ENST00000261037 C10orf25Q5T742 122 aa8.73□□□□□ -1.01
COL8A1-201ENST00000261037 COL5A1P20908 1838 aaPredicted RBP8.73□□□□□ -1.01
COL8A1-201ENST00000261037 CIRBP-AS1Q8TBR5 109 aa8.73□□□□□ -1.01
COL8A1-201ENST00000261037 C6orf223Q8N319 242 aa8.73□□□□□ -1.01
COL8A1-201ENST00000261037 IGLV4-60A0A075B6I1 120 aa8.72□□□□□ -1.01
COL8A1-201ENST00000261037 LINC00242Q5T6M2 205 aa8.72□□□□□ -1.01
COL8A1-201ENST00000261037 LINC00694P0DN24 101 aa8.72□□□□□ -1.01
COL8A1-201ENST00000261037 IGIPA6NJ69 53 aa8.72□□□□□ -1.01
COL8A1-201ENST00000261037 CHCHD7Q9BUK0 85 aa8.72□□□□□ -1.01
COL8A1-201ENST00000261037 MRPL55Q7Z7F7 128 aaKnown RBP8.71□□□□□ -1.01
COL8A1-201ENST00000261037 SERP2Q8N6R1 65 aa8.71□□□□□ -1.01
COL8A1-201ENST00000261037 PRR14LQ5THK1 2151 aa8.71□□□□□ -1.01
COL8A1-201ENST00000261037 CACNA1AO00555 2505 aa8.71□□□□□ -1.02
COL8A1-201ENST00000261037 A0A087WYN8 130 aa8.71□□□□□ -1.02
COL8A1-201ENST00000261037 TRBV10-3A0A0K0K1G6 114 aa8.71□□□□□ -1.02
COL8A1-201ENST00000261037 HIVEP2P31629 2446 aa8.71□□□□□ -1.02
COL8A1-201ENST00000261037 ESRGQ1W209 222 aa8.7□□□□□ -1.02
COL8A1-201ENST00000261037 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.7□□□□□ -1.02
COL8A1-201ENST00000261037 Q6ZTC4 211 aa8.7□□□□□ -1.02
COL8A1-201ENST00000261037 Q8N9L7 120 aa8.7□□□□□ -1.02
COL8A1-201ENST00000261037 LINC00474Q9P2X8 69 aa8.7□□□□□ -1.02
COL8A1-201ENST00000261037 REG3GQ6UW15 175 aa8.7□□□□□ -1.02
COL8A1-201ENST00000261037 A6NED7 52 aa8.7□□□□□ -1.02
COL8A1-201ENST00000261037 ATG2AQ2TAZ0 1938 aa8.7□□□□□ -1.02
COL8A1-201ENST00000261037 TSPEAR-AS2P59090 65 aa8.69□□□□□ -1.02
COL8A1-201ENST00000261037 IGLV5-52A0A0A0MRZ9 124 aa8.69□□□□□ -1.02
COL8A1-201ENST00000261037 XGP55808 180 aa8.69□□□□□ -1.02
COL8A1-201ENST00000261037 NUPR2A6NF83 97 aa8.69□□□□□ -1.02
COL8A1-201ENST00000261037 SMIM1B2RUZ4 78 aa8.69□□□□□ -1.02
COL8A1-201ENST00000261037 ZNF580Q9UK33 172 aa8.69□□□□□ -1.02
COL8A1-201ENST00000261037 PIEZO1Q92508 2521 aa8.69□□□□□ -1.02
COL8A1-201ENST00000261037 SERP1Q9Y6X1 66 aa8.69□□□□□ -1.02
COL8A1-201ENST00000261037 RAI1Q7Z5J4 1906 aaPredicted RBP8.69□□□□□ -1.02
COL8A1-201ENST00000261037 URB1-AS1Q96HZ7 61 aa8.69□□□□□ -1.02
COL8A1-201ENST00000261037 FHL2Q14192 279 aa8.68□□□□□ -1.02
COL8A1-201ENST00000261037 NOTCH2Q04721 2471 aa8.68□□□□□ -1.02
COL8A1-201ENST00000261037 Q6ZSN1 163 aa8.68□□□□□ -1.02
COL8A1-201ENST00000261037 IGHV6-1A0A0B4J1U7 121 aa8.67□□□□□ -1.02
COL8A1-201ENST00000261037 Q8N814 137 aa8.67□□□□□ -1.02
COL8A1-201ENST00000261037 IGLV1-51P01701 117 aa8.67□□□□□ -1.02
COL8A1-201ENST00000261037 Q6ZVQ6 151 aa8.67□□□□□ -1.02
COL8A1-201ENST00000261037 NTM-AS1Q6ZSK4 140 aa8.66□□□□□ -1.02
COL8A1-201ENST00000261037 NCOR2Q9Y618 2525 aa8.66□□□□□ -1.02
COL8A1-201ENST00000261037 CNFNQ9BYD5 112 aa8.66□□□□□ -1.02
COL8A1-201ENST00000261037 A0A1W2PPR1 153 aa8.66□□□□□ -1.02
COL8A1-201ENST00000261037 LINC00310P59036 64 aa8.66□□□□□ -1.02
COL8A1-201ENST00000261037 RPL28P46779 137 aaKnown RBP8.65□□□□□ -1.02
COL8A1-201ENST00000261037 LINC01556Q5JQF7 62 aa8.65□□□□□ -1.02
COL8A1-201ENST00000261037 C1orf137Q5JT78 98 aa8.65□□□□□ -1.02
COL8A1-201ENST00000261037 HCFC1P51610 2035 aa8.65□□□□□ -1.02
COL8A1-201ENST00000261037 ADAMTSL4-AS1Q5T5F5 129 aa8.65□□□□□ -1.02
COL8A1-201ENST00000261037 Q6JHZ5 121 aa8.65□□□□□ -1.02
COL8A1-201ENST00000261037 A0A087WVE0 104 aa8.65□□□□□ -1.03
COL8A1-201ENST00000261037 COX7CP15954 63 aa8.65□□□□□ -1.03
COL8A1-201ENST00000261037 CSPG4Q6UVK1 2322 aa8.65□□□□□ -1.03
COL8A1-201ENST00000261037 IGF2RP11717 2491 aa8.65□□□□□ -1.03
COL8A1-201ENST00000261037 NDUFC1O43677 76 aa8.65□□□□□ -1.03
COL8A1-201ENST00000261037 ATP5EP56381 51 aaPredicted RBP8.65□□□□□ -1.03
COL8A1-201ENST00000261037 DEFB116Q30KQ4 102 aa8.65□□□□□ -1.03
COL8A1-201ENST00000261037 EGFEM1PQ0D2K5 195 aa8.64□□□□□ -1.03
COL8A1-201ENST00000261037 V9GYY9 64 aa8.64□□□□□ -1.03
COL8A1-201ENST00000261037 PTPN13Q12923 2485 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms