RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 AKAP9Q99996 3911 aa13.53□□□□□ -0.24
SNX4-201ENST00000251775 TRACP01848 142 aa13.53□□□□□ -0.24
SNX4-201ENST00000251775 NBPF19A0A087WUL8 3843 aa13.52□□□□□ -0.24
SNX4-201ENST00000251775 BAALC-AS2P0C853 105 aa13.52□□□□□ -0.24
SNX4-201ENST00000251775 DGAT2L7PQ6IED9 249 aa13.52□□□□□ -0.24
SNX4-201ENST00000251775 HERVK_113P63121 156 aa13.52□□□□□ -0.25
SNX4-201ENST00000251775 FAM218AQ96MZ4 157 aa13.52□□□□□ -0.25
SNX4-201ENST00000251775 SMIM1B2RUZ4 78 aa13.51□□□□□ -0.25
SNX4-201ENST00000251775 CCL24O00175 119 aa13.51□□□□□ -0.25
SNX4-201ENST00000251775 C3orf22Q8N5N4 141 aa13.51□□□□□ -0.25
SNX4-201ENST00000251775 FLNAP21333 2647 aaKnown RBP13.5□□□□□ -0.25
SNX4-201ENST00000251775 CCDC168Q8NDH2 2452 aa13.5□□□□□ -0.25
SNX4-201ENST00000251775 C9orf153Q5TBE3 101 aa13.5□□□□□ -0.25
SNX4-201ENST00000251775 TRAV25A0A0B4J276 109 aa13.49□□□□□ -0.25
SNX4-201ENST00000251775 RS1O15537 224 aa13.49□□□□□ -0.25
SNX4-201ENST00000251775 NDUFA7O95182 113 aa13.49□□□□□ -0.25
SNX4-201ENST00000251775 C1orf158Q8N1D5 194 aa13.49□□□□□ -0.25
SNX4-201ENST00000251775 COPS9Q8WXC6 57 aa13.49□□□□□ -0.25
SNX4-201ENST00000251775 PRIMA1Q86XR5 153 aa13.48□□□□□ -0.25
SNX4-201ENST00000251775 STHQ8IWL8 128 aa13.48□□□□□ -0.25
SNX4-201ENST00000251775 PPDPFQ9H3Y8 114 aa13.48□□□□□ -0.25
SNX4-201ENST00000251775 LINC00694P0DN24 101 aa13.48□□□□□ -0.25
SNX4-201ENST00000251775 C5orf38Q86SI9 138 aa13.48□□□□□ -0.25
SNX4-201ENST00000251775 NF1P21359 2839 aa13.47□□□□□ -0.25
SNX4-201ENST00000251775 UQCRQO14949 82 aa13.47□□□□□ -0.25
SNX4-201ENST00000251775 FAM19A3Q7Z5A8 133 aa13.47□□□□□ -0.25
SNX4-201ENST00000251775 KRTAP1-1Q07627 177 aa13.47□□□□□ -0.25
SNX4-201ENST00000251775 FAM222AQ5U5X8 452 aa13.47□□□□□ -0.25
SNX4-201ENST00000251775 CXCL5P42830 114 aa13.46□□□□□ -0.26
SNX4-201ENST00000251775 LINC00526Q96FQ7 95 aa13.45□□□□□ -0.26
SNX4-201ENST00000251775 ATP5G1P05496 136 aa13.45□□□□□ -0.26
SNX4-201ENST00000251775 CUBNO60494 3623 aa13.44□□□□□ -0.26
SNX4-201ENST00000251775 TRAV13-1A0A0B4J241 112 aa13.44□□□□□ -0.26
SNX4-201ENST00000251775 IL17DQ8TAD2 202 aa13.44□□□□□ -0.26
SNX4-201ENST00000251775 F5H768 121 aa13.44□□□□□ -0.26
SNX4-201ENST00000251775 Q9HAA7 133 aa13.44□□□□□ -0.26
SNX4-201ENST00000251775 GAGE2AQ6NT46 116 aa13.43□□□□□ -0.26
SNX4-201ENST00000251775 LINC01006Q8NI28 216 aa13.43□□□□□ -0.26
SNX4-201ENST00000251775 INAFM2P0DMQ5 153 aa13.43□□□□□ -0.26
SNX4-201ENST00000251775 TRGV1A0A0A0MS02 117 aa13.42□□□□□ -0.26
SNX4-201ENST00000251775 ACANP16112 2415 aa13.42□□□□□ -0.26
SNX4-201ENST00000251775 TENM4Q6N022 2769 aa13.42□□□□□ -0.26
SNX4-201ENST00000251775 MALP21145 153 aa13.41□□□□□ -0.26
SNX4-201ENST00000251775 RPL28P46779 137 aaKnown RBP13.41□□□□□ -0.26
SNX4-201ENST00000251775 CSDC2Q9Y534 153 aaKnown RBP13.41□□□□□ -0.26
SNX4-201ENST00000251775 PDZD2O15018 2839 aa13.4□□□□□ -0.26
SNX4-201ENST00000251775 C2orf48Q96LS8 159 aa13.4□□□□□ -0.26
SNX4-201ENST00000251775 KLK5Q9Y337 293 aaPredicted RBP13.4□□□□□ -0.26
SNX4-201ENST00000251775 SETD2Q9BYW2 2564 aaPredicted RBP13.4□□□□□ -0.26
SNX4-201ENST00000251775 COX7CP15954 63 aa13.4□□□□□ -0.26
SNX4-201ENST00000251775 NTM-AS1Q6ZSK4 140 aa13.4□□□□□ -0.26
SNX4-201ENST00000251775 Q6ZTI0 123 aa13.4□□□□□ -0.26
SNX4-201ENST00000251775 HIST1H4AP62805 103 aaKnown RBP13.39□□□□□ -0.27
SNX4-201ENST00000251775 RNASE1P07998 156 aaKnown RBP13.38□□□□□ -0.27
SNX4-201ENST00000251775 WFDC10AQ9H1F0 79 aa13.38□□□□□ -0.27
SNX4-201ENST00000251775 C16orf95Q9H693 158 aa13.38□□□□□ -0.27
SNX4-201ENST00000251775 CDC42SE2Q9NRR3 84 aa13.38□□□□□ -0.27
SNX4-201ENST00000251775 GIG44P09565 113 aaPredicted RBP13.38□□□□□ -0.27
SNX4-201ENST00000251775 LINC00337Q8N6G1 96 aa13.38□□□□□ -0.27
SNX4-201ENST00000251775 TRAV13-2A0A0B4J235 113 aa13.37□□□□□ -0.27
SNX4-201ENST00000251775 PF4P02776 101 aa13.37□□□□□ -0.27
SNX4-201ENST00000251775 NOTCH3Q9UM47 2321 aa13.37□□□□□ -0.27
SNX4-201ENST00000251775 C9orf129Q5T035 196 aaKnown RBP13.37□□□□□ -0.27
SNX4-201ENST00000251775 IGKV2-28A0A075B6P5 120 aa13.36□□□□□ -0.27
SNX4-201ENST00000251775 IGKV2D-28P01615 120 aa13.36□□□□□ -0.27
SNX4-201ENST00000251775 CRPP02741 224 aa13.36□□□□□ -0.27
SNX4-201ENST00000251775 LOC107984640A0A0U1RRK4 108 aa13.36□□□□□ -0.27
SNX4-201ENST00000251775 A0A087WYN8 130 aa13.35□□□□□ -0.27
SNX4-201ENST00000251775 JMJD1CQ15652 2540 aa13.35□□□□□ -0.27
SNX4-201ENST00000251775 MTORP42345 2549 aa13.34□□□□□ -0.27
SNX4-201ENST00000251775 K7EQD1 137 aa13.34□□□□□ -0.27
SNX4-201ENST00000251775 CRYGAP11844 174 aa13.34□□□□□ -0.27
SNX4-201ENST00000251775 MIR7-3HGQ8N6C7 128 aa13.34□□□□□ -0.27
SNX4-201ENST00000251775 NOP10Q9NPE3 64 aaKnown RBP13.34□□□□□ -0.27
SNX4-201ENST00000251775 SETXQ7Z333 2677 aaKnown RBP13.34□□□□□ -0.27
SNX4-201ENST00000251775 RPL36AP83881 106 aaKnown RBP13.34□□□□□ -0.27
SNX4-201ENST00000251775 RPL36ALQ969Q0 106 aaKnown RBP13.34□□□□□ -0.27
SNX4-201ENST00000251775 C19orf73Q9NVV2 129 aa13.34□□□□□ -0.27
SNX4-201ENST00000251775 ATOX1O00244 68 aa13.33□□□□□ -0.28
SNX4-201ENST00000251775 IGLV1-51P01701 117 aa13.33□□□□□ -0.28
SNX4-201ENST00000251775 SND1-IT1Q9HBX3 110 aa13.33□□□□□ -0.28
SNX4-201ENST00000251775 RPL35AP18077 110 aaKnown RBP13.32□□□□□ -0.28
SNX4-201ENST00000251775 SMIM11BQ8TCY0 68 aa13.32□□□□□ -0.28
SNX4-201ENST00000251775 C14orf132Q9NPU4 83 aa13.32□□□□□ -0.28
SNX4-201ENST00000251775 TRBV10-1A0A0K0K1A3 114 aa13.32□□□□□ -0.28
SNX4-201ENST00000251775 PLAC8L1A1L4L8 177 aa13.32□□□□□ -0.28
SNX4-201ENST00000251775 DNAL4O96015 105 aa13.32□□□□□ -0.28
SNX4-201ENST00000251775 CMC4P56277 68 aaPredicted RBP13.31□□□□□ -0.28
SNX4-201ENST00000251775 OVOL2Q9BRP0 275 aa13.31□□□□□ -0.28
SNX4-201ENST00000251775 ANK3Q12955 4377 aaKnown RBP13.31□□□□□ -0.28
SNX4-201ENST00000251775 NIPBLQ6KC79 2804 aaeCLIP13.3□□□□□ -0.28
SNX4-201ENST00000251775 A0A1B0GX51 115 aa13.3□□□□□ -0.28
SNX4-201ENST00000251775 COX7B2Q8TF08 81 aa13.3□□□□□ -0.28
SNX4-201ENST00000251775 OBSCN-AS1Q96MR7 158 aa13.3□□□□□ -0.28
SNX4-201ENST00000251775 ITPR2Q14571 2701 aa13.29□□□□□ -0.28
SNX4-201ENST00000251775 PLA2G2AP14555 144 aa13.29□□□□□ -0.28
SNX4-201ENST00000251775 CYSTM1Q9H1C7 97 aa13.29□□□□□ -0.28
SNX4-201ENST00000251775 hADV29S1A0JD25 119 aa13.29□□□□□ -0.28
SNX4-201ENST00000251775 RPL18AQ02543 176 aaKnown RBP13.29□□□□□ -0.28
SNX4-201ENST00000251775 IGKV3D-7A0A0C4DH55 119 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms