RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 C22orf24Q9Y442 160 aa8.58□□□□□ -1.04
SEC61A1-201ENST00000243253 HTN3P15516 51 aa8.58□□□□□ -1.04
SEC61A1-201ENST00000243253 TMEM101Q96IK0 257 aa8.58□□□□□ -1.04
SEC61A1-201ENST00000243253 LOC100131303A0A0U1RQF7 123 aa8.57□□□□□ -1.04
SEC61A1-201ENST00000243253 NDUFA1O15239 70 aa8.57□□□□□ -1.04
SEC61A1-201ENST00000243253 TIRAPP58753 221 aa8.57□□□□□ -1.04
SEC61A1-201ENST00000243253 CDKN2A-AS1Q9UH64 79 aa8.57□□□□□ -1.04
SEC61A1-201ENST00000243253 OTOGQ6ZRI0 2925 aa8.56□□□□□ -1.04
SEC61A1-201ENST00000243253 COX6CP09669 75 aa8.56□□□□□ -1.04
SEC61A1-201ENST00000243253 MAP6D1Q9H9H5 199 aa8.56□□□□□ -1.04
SEC61A1-201ENST00000243253 DEFB113Q30KQ7 82 aa8.56□□□□□ -1.04
SEC61A1-201ENST00000243253 ZNF843Q8N446 348 aa8.56□□□□□ -1.04
SEC61A1-201ENST00000243253 TEX29Q8N6K0 151 aa8.55□□□□□ -1.04
SEC61A1-201ENST00000243253 DNAJC30Q96LL9 226 aa8.55□□□□□ -1.04
SEC61A1-201ENST00000243253 FBN1P35555 2871 aaKnown RBP8.55□□□□□ -1.04
SEC61A1-201ENST00000243253 C2orf82Q6UX34 121 aa8.55□□□□□ -1.04
SEC61A1-201ENST00000243253 SOSTDC1Q6X4U4 206 aa8.55□□□□□ -1.04
SEC61A1-201ENST00000243253 CLEC2BQ92478 149 aa8.55□□□□□ -1.04
SEC61A1-201ENST00000243253 SDIM1Q6ZPB5 146 aa8.55□□□□□ -1.04
SEC61A1-201ENST00000243253 OR13C6PQ8NH95 151 aa8.55□□□□□ -1.04
SEC61A1-201ENST00000243253 PEMTQ9UBM1 199 aa8.55□□□□□ -1.04
SEC61A1-201ENST00000243253 H3BT86 120 aa8.54□□□□□ -1.04
SEC61A1-201ENST00000243253 LINC00242Q5T6M2 205 aa8.54□□□□□ -1.04
SEC61A1-201ENST00000243253 F5H768 121 aa8.54□□□□□ -1.04
SEC61A1-201ENST00000243253 ZNF415Q09FC8 603 aa8.54□□□□□ -1.04
SEC61A1-201ENST00000243253 GAGE6Q13070 117 aa8.54□□□□□ -1.04
SEC61A1-201ENST00000243253 SHISA2Q6UWI4 295 aa8.54□□□□□ -1.04
SEC61A1-201ENST00000243253 LINC00694P0DN24 101 aa8.54□□□□□ -1.04
SEC61A1-201ENST00000243253 COL6A5A8TX70 2615 aa8.53□□□□□ -1.04
SEC61A1-201ENST00000243253 FAM240AA0A1B0GVK7 77 aa8.53□□□□□ -1.04
SEC61A1-201ENST00000243253 CCL24O00175 119 aa8.53□□□□□ -1.04
SEC61A1-201ENST00000243253 NDUFV3P56181 108 aaKnown RBP8.53□□□□□ -1.04
SEC61A1-201ENST00000243253 NTM-AS1Q6ZSK4 140 aa8.53□□□□□ -1.04
SEC61A1-201ENST00000243253 DNAJC9-AS1A6NH13 148 aa8.53□□□□□ -1.04
SEC61A1-201ENST00000243253 J3QLI3 93 aa8.53□□□□□ -1.04
SEC61A1-201ENST00000243253 IFITM1P13164 125 aa8.53□□□□□ -1.04
SEC61A1-201ENST00000243253 PPDPFQ9H3Y8 114 aa8.53□□□□□ -1.04
SEC61A1-201ENST00000243253 INSP01308 110 aa8.53□□□□□ -1.04
SEC61A1-201ENST00000243253 UBE2WQ96B02 151 aa8.53□□□□□ -1.04
SEC61A1-201ENST00000243253 TRGV4A0A0C4DH28 118 aa8.52□□□□□ -1.05
SEC61A1-201ENST00000243253 UBE2L6O14933 153 aa8.52□□□□□ -1.05
SEC61A1-201ENST00000243253 SS18L2Q9UHA2 77 aa8.52□□□□□ -1.05
SEC61A1-201ENST00000243253 CSDC2Q9Y534 153 aaKnown RBP8.52□□□□□ -1.05
SEC61A1-201ENST00000243253 B5MCH6 92 aa8.52□□□□□ -1.05
SEC61A1-201ENST00000243253 DSCR9P59020 149 aa8.52□□□□□ -1.05
SEC61A1-201ENST00000243253 GAGE2BQ13066 116 aa8.52□□□□□ -1.05
SEC61A1-201ENST00000243253 GAGE2EQ4V326 116 aa8.52□□□□□ -1.05
SEC61A1-201ENST00000243253 LINC00308Q8TCZ7 52 aa8.52□□□□□ -1.05
SEC61A1-201ENST00000243253 CHCHD5Q9BSY4 110 aa8.52□□□□□ -1.05
SEC61A1-201ENST00000243253 GAGE2DQ9UEU5 116 aa8.52□□□□□ -1.05
SEC61A1-201ENST00000243253 SMIM1B2RUZ4 78 aa8.52□□□□□ -1.05
SEC61A1-201ENST00000243253 PFN2P35080 140 aa8.51□□□□□ -1.05
SEC61A1-201ENST00000243253 Q9H8V8 135 aa8.51□□□□□ -1.05
SEC61A1-201ENST00000243253 C1orf158Q8N1D5 194 aa8.5□□□□□ -1.05
SEC61A1-201ENST00000243253 TRAV8-4A0A0B4J246 113 aa8.5□□□□□ -1.05
SEC61A1-201ENST00000243253 DEFB114Q30KQ6 69 aa8.5□□□□□ -1.05
SEC61A1-201ENST00000243253 ODF3L2Q3SX64 289 aa8.5□□□□□ -1.05
SEC61A1-201ENST00000243253 PRIMA1Q86XR5 153 aa8.5□□□□□ -1.05
SEC61A1-201ENST00000243253 PF4P02776 101 aa8.5□□□□□ -1.05
SEC61A1-201ENST00000243253 MRPL23Q16540 153 aaKnown RBP8.5□□□□□ -1.05
SEC61A1-201ENST00000243253 C4orf3Q8WVX3 66 aa8.49□□□□□ -1.05
SEC61A1-201ENST00000243253 CIRBPQ14011 172 aaKnown RBP8.49□□□□□ -1.05
SEC61A1-201ENST00000243253 C5orf38Q86SI9 138 aa8.49□□□□□ -1.05
SEC61A1-201ENST00000243253 IGLV10-54A0A075B6I4 117 aa8.48□□□□□ -1.05
SEC61A1-201ENST00000243253 TRBV7-7A0A0K0K1E9 115 aa8.48□□□□□ -1.05
SEC61A1-201ENST00000243253 LINC00482Q8N8I6 264 aa8.48□□□□□ -1.05
SEC61A1-201ENST00000243253 C15orf53Q8NAA6 179 aa8.48□□□□□ -1.05
SEC61A1-201ENST00000243253 SMCR5Q8TEV8 140 aa8.48□□□□□ -1.05
SEC61A1-201ENST00000243253 PLAC8L1A1L4L8 177 aa8.47□□□□□ -1.05
SEC61A1-201ENST00000243253 CCDC179H3BU77 68 aa8.47□□□□□ -1.05
SEC61A1-201ENST00000243253 GIG44P09565 113 aaPredicted RBP8.47□□□□□ -1.05
SEC61A1-201ENST00000243253 CDC42SE2Q9NRR3 84 aa8.47□□□□□ -1.05
SEC61A1-201ENST00000243253 BAHCC1Q9P281 2608 aa8.47□□□□□ -1.05
SEC61A1-201ENST00000243253 FAM218AQ96MZ4 157 aa8.47□□□□□ -1.05
SEC61A1-201ENST00000243253 LINC00158P58513 81 aa8.46□□□□□ -1.05
SEC61A1-201ENST00000243253 HERVK_113P63121 156 aa8.46□□□□□ -1.05
SEC61A1-201ENST00000243253 RPL36AP83881 106 aaKnown RBP8.46□□□□□ -1.05
SEC61A1-201ENST00000243253 RPL36ALQ969Q0 106 aaKnown RBP8.46□□□□□ -1.05
SEC61A1-201ENST00000243253 COX7A2LO14548 114 aa8.46□□□□□ -1.06
SEC61A1-201ENST00000243253 PKD1L1Q8TDX9 2849 aa8.45□□□□□ -1.06
SEC61A1-201ENST00000243253 XCL1P47992 114 aa8.44□□□□□ -1.06
SEC61A1-201ENST00000243253 KRTAP1-3Q8IUG1 177 aa8.44□□□□□ -1.06
SEC61A1-201ENST00000243253 NSD1Q96L73 2696 aaPredicted RBP8.44□□□□□ -1.06
SEC61A1-201ENST00000243253 LINC00526Q96FQ7 95 aa8.43□□□□□ -1.06
SEC61A1-201ENST00000243253 IGKV2-28A0A075B6P5 120 aa8.43□□□□□ -1.06
SEC61A1-201ENST00000243253 TRBV10-1A0A0K0K1A3 114 aa8.43□□□□□ -1.06
SEC61A1-201ENST00000243253 IGKV2D-28P01615 120 aa8.43□□□□□ -1.06
SEC61A1-201ENST00000243253 DNAL4O96015 105 aa8.42□□□□□ -1.06
SEC61A1-201ENST00000243253 TRRAPQ9Y4A5 3859 aa8.42□□□□□ -1.06
SEC61A1-201ENST00000243253 K7EQD1 137 aa8.42□□□□□ -1.06
SEC61A1-201ENST00000243253 LINC01006Q8NI28 216 aa8.42□□□□□ -1.06
SEC61A1-201ENST00000243253 Q9HAA7 133 aa8.42□□□□□ -1.06
SEC61A1-201ENST00000243253 PAX4O43316 350 aa8.42□□□□□ -1.06
SEC61A1-201ENST00000243253 GAGE2AQ6NT46 116 aa8.42□□□□□ -1.06
SEC61A1-201ENST00000243253 DAZ2Q13117 558 aaKnown RBP8.41□□□□□ -1.06
SEC61A1-201ENST00000243253 DAZ4Q86SG3 579 aaKnown RBP8.41□□□□□ -1.06
SEC61A1-201ENST00000243253 DAZ3Q9NR90 486 aaKnown RBP8.41□□□□□ -1.06
SEC61A1-201ENST00000243253 TRACP01848 142 aa8.41□□□□□ -1.06
SEC61A1-201ENST00000243253 DEFB135Q30KP9 77 aa8.4□□□□□ -1.06
SEC61A1-201ENST00000243253 LINC00337Q8N6G1 96 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms