RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 BAHCC1Q9P281 2608 aa12.87□□□□□ -0.35
HOXC11-201ENST00000243082 A0A096LPF7 62 aa12.86□□□□□ -0.35
HOXC11-201ENST00000243082 CFC1BP0CG36 223 aa12.86□□□□□ -0.35
HOXC11-201ENST00000243082 CFC1P0CG37 223 aa12.86□□□□□ -0.35
HOXC11-201ENST00000243082 SPART-AS1P0CW21 52 aa12.86□□□□□ -0.35
HOXC11-201ENST00000243082 MUSTN1Q8IVN3 82 aa12.86□□□□□ -0.35
HOXC11-201ENST00000243082 PKD1L1Q8TDX9 2849 aa12.86□□□□□ -0.35
HOXC11-201ENST00000243082 APOMO95445 188 aa12.85□□□□□ -0.35
HOXC11-201ENST00000243082 ATP5G1P05496 136 aa12.85□□□□□ -0.35
HOXC11-201ENST00000243082 NDUFA1O15239 70 aa12.84□□□□□ -0.35
HOXC11-201ENST00000243082 ADAMTSL4-AS1Q5T5F5 129 aa12.84□□□□□ -0.35
HOXC11-201ENST00000243082 PGPEP1Q9NXJ5 209 aa12.84□□□□□ -0.35
HOXC11-201ENST00000243082 A4D1N5 150 aa12.83□□□□□ -0.36
HOXC11-201ENST00000243082 SPANXDQ9BXN6 97 aa12.83□□□□□ -0.36
HOXC11-201ENST00000243082 SPANXCQ9NY87 97 aa12.83□□□□□ -0.36
HOXC11-201ENST00000243082 TRAV26-1A0A087WT03 109 aa12.82□□□□□ -0.36
HOXC11-201ENST00000243082 IGKV3OR2-268A0A0C4DH90 116 aa12.82□□□□□ -0.36
HOXC11-201ENST00000243082 A0A1B0GUV1 79 aa12.81□□□□□ -0.36
HOXC11-201ENST00000243082 EIF4EBP3O60516 100 aaPredicted RBP12.81□□□□□ -0.36
HOXC11-201ENST00000243082 RPL24P83731 157 aaKnown RBP12.81□□□□□ -0.36
HOXC11-201ENST00000243082 TSPAN13O95857 204 aa12.81□□□□□ -0.36
HOXC11-201ENST00000243082 TMEM262E9PQX1 116 aa12.8□□□□□ -0.36
HOXC11-201ENST00000243082 TIMM17BO60830 172 aa12.8□□□□□ -0.36
HOXC11-201ENST00000243082 RBX1P62877 108 aa12.8□□□□□ -0.36
HOXC11-201ENST00000243082 Q9H8V8 135 aa12.8□□□□□ -0.36
HOXC11-201ENST00000243082 ANK2Q01484 3957 aa12.8□□□□□ -0.36
HOXC11-201ENST00000243082 MIAQ16674 131 aa12.79□□□□□ -0.36
HOXC11-201ENST00000243082 RETNQ9HD89 108 aa12.79□□□□□ -0.36
HOXC11-201ENST00000243082 MAST4O15021 2626 aa12.79□□□□□ -0.36
HOXC11-201ENST00000243082 DNAH3Q8TD57 4116 aa12.79□□□□□ -0.36
HOXC11-201ENST00000243082 IGHV3OR16-9A0A0B4J2B5 98 aa12.78□□□□□ -0.36
HOXC11-201ENST00000243082 PRSS2P07478 247 aa12.78□□□□□ -0.36
HOXC11-201ENST00000243082 ZNF625Q96I27 306 aaPredicted RBP12.78□□□□□ -0.36
HOXC11-201ENST00000243082 LINC00959A0A1B0GUT2 108 aa12.78□□□□□ -0.36
HOXC11-201ENST00000243082 G3V4G9 280 aa12.78□□□□□ -0.36
HOXC11-201ENST00000243082 HTN3P15516 51 aa12.78□□□□□ -0.36
HOXC11-201ENST00000243082 PRO1854Q9UHT4 67 aa12.78□□□□□ -0.36
HOXC11-201ENST00000243082 A0A0B4J2C4 111 aa12.76□□□□□ -0.37
HOXC11-201ENST00000243082 TEX48A0A1B0GUV7 120 aa12.76□□□□□ -0.37
HOXC11-201ENST00000243082 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.75□□□□□ -0.37
HOXC11-201ENST00000243082 MRPL23Q16540 153 aaKnown RBP12.75□□□□□ -0.37
HOXC11-201ENST00000243082 DAND5Q8N907 189 aa12.74□□□□□ -0.37
HOXC11-201ENST00000243082 A0A087WZ39 114 aa12.74□□□□□ -0.37
HOXC11-201ENST00000243082 NPC2P61916 151 aa12.74□□□□□ -0.37
HOXC11-201ENST00000243082 CIRBPQ14011 172 aaKnown RBP12.74□□□□□ -0.37
HOXC11-201ENST00000243082 IGHV3-33P01772 117 aa12.73□□□□□ -0.37
HOXC11-201ENST00000243082 SFTA2Q6UW10 78 aa12.73□□□□□ -0.37
HOXC11-201ENST00000243082 COL6A5A8TX70 2615 aa12.73□□□□□ -0.37
HOXC11-201ENST00000243082 H3BMG7 143 aa12.72□□□□□ -0.37
HOXC11-201ENST00000243082 IFITM1P13164 125 aa12.72□□□□□ -0.37
HOXC11-201ENST00000243082 COX7B2Q8TF08 81 aa12.72□□□□□ -0.37
HOXC11-201ENST00000243082 ICOSQ9Y6W8 199 aa12.72□□□□□ -0.37
HOXC11-201ENST00000243082 HERV-K104P63124 156 aa12.72□□□□□ -0.37
HOXC11-201ENST00000243082 C5orf38Q86SI9 138 aa12.72□□□□□ -0.37
HOXC11-201ENST00000243082 LOC107984156A0A0G2JMH3 177 aa12.71□□□□□ -0.37
HOXC11-201ENST00000243082 ARL17AQ8IVW1 177 aa12.71□□□□□ -0.37
HOXC11-201ENST00000243082 Q8N3U1 123 aa12.71□□□□□ -0.37
HOXC11-201ENST00000243082 SS18Q15532 418 aa12.71□□□□□ -0.38
HOXC11-201ENST00000243082 CLPSL2Q6UWE3 100 aa12.71□□□□□ -0.38
HOXC11-201ENST00000243082 SH2D6Q7Z4S9 175 aa12.71□□□□□ -0.38
HOXC11-201ENST00000243082 A0A0U1RRA0 63 aa12.69□□□□□ -0.38
HOXC11-201ENST00000243082 XCL1P47992 114 aa12.69□□□□□ -0.38
HOXC11-201ENST00000243082 LELP1Q5T871 98 aa12.69□□□□□ -0.38
HOXC11-201ENST00000243082 LINC00269Q8N2A0 174 aa12.69□□□□□ -0.38
HOXC11-201ENST00000243082 TOMM7Q9P0U1 55 aa12.69□□□□□ -0.38
HOXC11-201ENST00000243082 ERG28Q9UKR5 140 aa12.69□□□□□ -0.38
HOXC11-201ENST00000243082 MEIG1Q5JSS6 88 aa12.69□□□□□ -0.38
HOXC11-201ENST00000243082 LINC00308Q8TCZ7 52 aa12.69□□□□□ -0.38
HOXC11-201ENST00000243082 C11orf68Q9H3H3 251 aaKnown RBP12.69□□□□□ -0.38
HOXC11-201ENST00000243082 OCIAD2Q56VL3 154 aa12.67□□□□□ -0.38
HOXC11-201ENST00000243082 F8W1H4 67 aa12.66□□□□□ -0.38
HOXC11-201ENST00000243082 H7C2G1 150 aa12.66□□□□□ -0.38
HOXC11-201ENST00000243082 ANGP03950 147 aaKnown RBP12.66□□□□□ -0.38
HOXC11-201ENST00000243082 SOSTDC1Q6X4U4 206 aa12.66□□□□□ -0.38
HOXC11-201ENST00000243082 PRO0461Q9UI25 63 aa12.66□□□□□ -0.38
HOXC11-201ENST00000243082 PSMB2P49721 201 aa12.66□□□□□ -0.38
HOXC11-201ENST00000243082 LYRM7Q5U5X0 104 aa12.66□□□□□ -0.38
HOXC11-201ENST00000243082 Q6ZTC4 211 aa12.66□□□□□ -0.38
HOXC11-201ENST00000243082 REG3AQ06141 175 aa12.65□□□□□ -0.38
HOXC11-201ENST00000243082 LYPD5Q6UWN5 251 aa12.65□□□□□ -0.38
HOXC11-201ENST00000243082 TENM3Q9P273 2699 aa12.64□□□□□ -0.39
HOXC11-201ENST00000243082 A0A0J9YWU9 116 aa12.64□□□□□ -0.39
HOXC11-201ENST00000243082 H3BNG1 76 aa12.64□□□□□ -0.39
HOXC11-201ENST00000243082 TCL1BO95988 128 aa12.64□□□□□ -0.39
HOXC11-201ENST00000243082 WFDC2Q14508 124 aa12.64□□□□□ -0.39
HOXC11-201ENST00000243082 CD164L2Q6UWJ8 174 aa12.63□□□□□ -0.39
HOXC11-201ENST00000243082 LINC01561Q8N1V8 128 aa12.63□□□□□ -0.39
HOXC11-201ENST00000243082 NOTCH1P46531 2555 aa12.63□□□□□ -0.39
HOXC11-201ENST00000243082 SCGB1C2P0DMR2 95 aa12.62□□□□□ -0.39
HOXC11-201ENST00000243082 MTURNQ8N3F0 131 aa12.62□□□□□ -0.39
HOXC11-201ENST00000243082 CHCHD10Q8WYQ3 142 aaPredicted RBP12.62□□□□□ -0.39
HOXC11-201ENST00000243082 TRBV20-1A0A075B6N2 111 aa12.62□□□□□ -0.39
HOXC11-201ENST00000243082 Q1RN00 199 aa12.62□□□□□ -0.39
HOXC11-201ENST00000243082 KPRPQ5T749 579 aaPredicted RBP12.62□□□□□ -0.39
HOXC11-201ENST00000243082 COPS9Q8WXC6 57 aa12.62□□□□□ -0.39
HOXC11-201ENST00000243082 IGLV10-54A0A075B6I4 117 aa12.61□□□□□ -0.39
HOXC11-201ENST00000243082 PRB2P02812 416 aaPredicted RBP12.61□□□□□ -0.39
HOXC11-201ENST00000243082 PPDPFQ9H3Y8 114 aa12.61□□□□□ -0.39
HOXC11-201ENST00000243082 TRBV30A0A0K0K1B3 111 aa12.6□□□□□ -0.39
HOXC11-201ENST00000243082 C6orf226Q5I0X4 101 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms