RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 PRR9Q5T870 116 aa6.71□□□□□ -1.34
TGFB3-201ENST00000238682 UBE2WQ96B02 151 aa6.71□□□□□ -1.34
TGFB3-201ENST00000238682 SMIM26A0A096LP01 95 aa6.71□□□□□ -1.34
TGFB3-201ENST00000238682 PRSS3P2Q8NHM4 247 aa6.71□□□□□ -1.34
TGFB3-201ENST00000238682 TMEM263Q8WUH6 116 aaKnown RBP6.71□□□□□ -1.34
TGFB3-201ENST00000238682 NPC2P61916 151 aa6.7□□□□□ -1.34
TGFB3-201ENST00000238682 PMAIP1Q13794 54 aa6.7□□□□□ -1.34
TGFB3-201ENST00000238682 C5orf38Q86SI9 138 aa6.7□□□□□ -1.34
TGFB3-201ENST00000238682 MSRB1Q9NZV6 116 aa6.7□□□□□ -1.34
TGFB3-201ENST00000238682 TRAV12-3A0A0B4J271 114 aa6.7□□□□□ -1.34
TGFB3-201ENST00000238682 IGHV3-16A0A0C4DH30 117 aa6.7□□□□□ -1.34
TGFB3-201ENST00000238682 LOC107984156A0A0G2JMH3 177 aa6.7□□□□□ -1.34
TGFB3-201ENST00000238682 LCE6AA0A183 80 aa6.7□□□□□ -1.34
TGFB3-201ENST00000238682 MIFP14174 115 aa6.7□□□□□ -1.34
TGFB3-201ENST00000238682 DAZ2Q13117 558 aaKnown RBP6.7□□□□□ -1.34
TGFB3-201ENST00000238682 ARL17AQ8IVW1 177 aa6.7□□□□□ -1.34
TGFB3-201ENST00000238682 VWFP04275 2813 aa6.69□□□□□ -1.34
TGFB3-201ENST00000238682 TCL1BO95988 128 aa6.69□□□□□ -1.34
TGFB3-201ENST00000238682 GIG44P09565 113 aaPredicted RBP6.69□□□□□ -1.34
TGFB3-201ENST00000238682 CASC10Q5T4H9 136 aa6.69□□□□□ -1.34
TGFB3-201ENST00000238682 NEXN-AS1Q8NBZ9 246 aa6.69□□□□□ -1.34
TGFB3-201ENST00000238682 HHLA3Q9XRX5 114 aa6.69□□□□□ -1.34
TGFB3-201ENST00000238682 TRBV10-2A0A0K0K1G8 114 aa6.69□□□□□ -1.34
TGFB3-201ENST00000238682 S100A4P26447 101 aaKnown RBP6.69□□□□□ -1.34
TGFB3-201ENST00000238682 SERP2Q8N6R1 65 aa6.69□□□□□ -1.34
TGFB3-201ENST00000238682 OVOL2Q9BRP0 275 aa6.69□□□□□ -1.34
TGFB3-201ENST00000238682 NXT2Q9NPJ8 142 aaKnown RBP6.69□□□□□ -1.34
TGFB3-201ENST00000238682 ATXN8Q156A1 80 aa6.68□□□□□ -1.34
TGFB3-201ENST00000238682 FAM104BQ5XKR9 115 aa6.68□□□□□ -1.34
TGFB3-201ENST00000238682 LINC01546A6NGU7 62 aa6.68□□□□□ -1.34
TGFB3-201ENST00000238682 D6R8Y8 96 aa6.68□□□□□ -1.34
TGFB3-201ENST00000238682 H3BVH4 76 aa6.68□□□□□ -1.34
TGFB3-201ENST00000238682 PPP1R17O96001 155 aa6.68□□□□□ -1.34
TGFB3-201ENST00000238682 IGKV3-20P01619 116 aa6.68□□□□□ -1.34
TGFB3-201ENST00000238682 KLK5Q9Y337 293 aaPredicted RBP6.68□□□□□ -1.34
TGFB3-201ENST00000238682 TIMM8BQ9Y5J9 83 aaPredicted RBP6.68□□□□□ -1.34
TGFB3-201ENST00000238682 ZNF56Q15929 161 aa6.67□□□□□ -1.34
TGFB3-201ENST00000238682 MRPL51Q4U2R6 128 aaKnown RBP6.67□□□□□ -1.34
TGFB3-201ENST00000238682 LOC389332A0A1B0GUA5 103 aa6.67□□□□□ -1.34
TGFB3-201ENST00000238682 LINC01549A6NIU2 74 aa6.67□□□□□ -1.34
TGFB3-201ENST00000238682 LYRM9A8MSI8 78 aa6.67□□□□□ -1.34
TGFB3-201ENST00000238682 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
TGFB3-201ENST00000238682 RNASE3P12724 160 aaKnown RBP6.67□□□□□ -1.34
TGFB3-201ENST00000238682 SDIM1Q6ZPB5 146 aa6.67□□□□□ -1.34
TGFB3-201ENST00000238682 C11orf72Q8NBR9 251 aa6.67□□□□□ -1.34
TGFB3-201ENST00000238682 NTN5Q8WTR8 489 aaPredicted RBP6.67□□□□□ -1.34
TGFB3-201ENST00000238682 C11orf68Q9H3H3 251 aaKnown RBP6.67□□□□□ -1.34
TGFB3-201ENST00000238682 DPH3P1Q9H4G8 78 aa6.67□□□□□ -1.34
TGFB3-201ENST00000238682 XCL2Q9UBD3 114 aa6.67□□□□□ -1.34
TGFB3-201ENST00000238682 PHLDA3Q9Y5J5 127 aa6.67□□□□□ -1.34
TGFB3-201ENST00000238682 PLNP26678 52 aa6.66□□□□□ -1.34
TGFB3-201ENST00000238682 ZC2HC1BQ5TFG8 222 aa6.66□□□□□ -1.34
TGFB3-201ENST00000238682 ZFP2Q6ZN57 461 aa6.66□□□□□ -1.34
TGFB3-201ENST00000238682 A0A096LNJ9 63 aa6.66□□□□□ -1.34
TGFB3-201ENST00000238682 RBMY1A1P0DJD3 496 aaKnown RBP6.66□□□□□ -1.34
TGFB3-201ENST00000238682 RBMY1CP0DJD4 496 aa6.66□□□□□ -1.34
TGFB3-201ENST00000238682 CKS2P33552 79 aa6.66□□□□□ -1.34
TGFB3-201ENST00000238682 RBMY1FQ15415 496 aaKnown RBP6.66□□□□□ -1.34
TGFB3-201ENST00000238682 ORMDL3Q8N138 153 aa6.66□□□□□ -1.34
TGFB3-201ENST00000238682 PKD1L1Q8TDX9 2849 aa6.65□□□□□ -1.34
TGFB3-201ENST00000238682 hADV29S1A0JD25 119 aa6.65□□□□□ -1.34
TGFB3-201ENST00000238682 M0R381 172 aa6.65□□□□□ -1.34
TGFB3-201ENST00000238682 IFI27P40305 119 aaPredicted RBP6.65□□□□□ -1.34
TGFB3-201ENST00000238682 SRSF9Q13242 221 aaKnown RBP eCLIP6.65□□□□□ -1.34
TGFB3-201ENST00000238682 SPANXN1Q5VSR9 72 aa6.65□□□□□ -1.34
TGFB3-201ENST00000238682 LINC00612Q8N6U2 182 aa6.65□□□□□ -1.34
TGFB3-201ENST00000238682 NUPR2A6NF83 97 aa6.65□□□□□ -1.35
TGFB3-201ENST00000238682 GAS8-AS1O95177 125 aa6.65□□□□□ -1.35
TGFB3-201ENST00000238682 ATP5EP56381 51 aaPredicted RBP6.65□□□□□ -1.35
TGFB3-201ENST00000238682 Q6ZRU5 148 aa6.65□□□□□ -1.35
TGFB3-201ENST00000238682 RNF185Q96GF1 192 aa6.65□□□□□ -1.35
TGFB3-201ENST00000238682 UPK3BQ9BT76 320 aa6.65□□□□□ -1.35
TGFB3-201ENST00000238682 WFDC10AQ9H1F0 79 aa6.65□□□□□ -1.35
TGFB3-201ENST00000238682 GNRH2O43555 120 aa6.64□□□□□ -1.35
TGFB3-201ENST00000238682 RPL18AQ02543 176 aaKnown RBP6.64□□□□□ -1.35
TGFB3-201ENST00000238682 PRKDCP78527 4128 aaKnown RBP6.64□□□□□ -1.35
TGFB3-201ENST00000238682 FXYD7P58549 80 aa6.64□□□□□ -1.35
TGFB3-201ENST00000238682 DSCR8Q96T75 97 aa6.64□□□□□ -1.35
TGFB3-201ENST00000238682 IGKV2D-26A0A0A0MRZ7 120 aa6.63□□□□□ -1.35
TGFB3-201ENST00000238682 WNK1Q9H4A3 2382 aa6.63□□□□□ -1.35
TGFB3-201ENST00000238682 TRAV26-2A0A0B4J265 109 aa6.62□□□□□ -1.35
TGFB3-201ENST00000238682 A0A0U1RQV1 116 aa6.62□□□□□ -1.35
TGFB3-201ENST00000238682 PRR15Q8IV56 129 aa6.62□□□□□ -1.35
TGFB3-201ENST00000238682 K7EMI3 77 aa6.61□□□□□ -1.35
TGFB3-201ENST00000238682 FCER1GP30273 86 aa6.61□□□□□ -1.35
TGFB3-201ENST00000238682 HERVK_113P61574 105 aa6.61□□□□□ -1.35
TGFB3-201ENST00000238682 MAPKAPK5-AS1Q8N8E1 139 aa6.61□□□□□ -1.35
TGFB3-201ENST00000238682 PRO1854Q9UHT4 67 aa6.61□□□□□ -1.35
TGFB3-201ENST00000238682 PLAC8L1A1L4L8 177 aa6.61□□□□□ -1.35
TGFB3-201ENST00000238682 LAGE3Q14657 143 aa6.6□□□□□ -1.35
TGFB3-201ENST00000238682 ZNF876PQ49A33 203 aa6.6□□□□□ -1.35
TGFB3-201ENST00000238682 Q8NAQ8 132 aa6.6□□□□□ -1.35
TGFB3-201ENST00000238682 KIF25-AS1Q9Y6Z4 181 aa6.6□□□□□ -1.35
TGFB3-201ENST00000238682 TRBV7-6A0A0J9YX20 115 aa6.6□□□□□ -1.35
TGFB3-201ENST00000238682 SPART-AS1P0CW21 52 aa6.6□□□□□ -1.35
TGFB3-201ENST00000238682 MRPL55Q7Z7F7 128 aaKnown RBP6.6□□□□□ -1.35
TGFB3-201ENST00000238682 A0A0B4J2C4 111 aa6.59□□□□□ -1.35
TGFB3-201ENST00000238682 TRBV10-1A0A0K0K1A3 114 aa6.59□□□□□ -1.35
TGFB3-201ENST00000238682 BCE1O60756 84 aa6.59□□□□□ -1.35
TGFB3-201ENST00000238682 C14orf178Q8N769 122 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms