RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 IGHV3-30-3P0DP02 117 aa7.46□□□□□ -1.22
CDCA3-201ENST00000229265 DEFB130BP0DP73 79 aa7.46□□□□□ -1.22
CDCA3-201ENST00000229265 DEFB130AP0DP74 79 aa7.46□□□□□ -1.22
CDCA3-201ENST00000229265 DAD1P61803 113 aa7.46□□□□□ -1.22
CDCA3-201ENST00000229265 SFTA2Q6UW10 78 aa7.46□□□□□ -1.22
CDCA3-201ENST00000229265 LINC01561Q8N1V8 128 aa7.46□□□□□ -1.22
CDCA3-201ENST00000229265 LINC00469Q8N7U9 141 aa7.46□□□□□ -1.22
CDCA3-201ENST00000229265 Q8NAQ8 132 aa7.46□□□□□ -1.22
CDCA3-201ENST00000229265 COPS9Q8WXC6 57 aa7.46□□□□□ -1.22
CDCA3-201ENST00000229265 IGHV4-28A0A0C4DH34 117 aa7.45□□□□□ -1.22
CDCA3-201ENST00000229265 TMEM238C9JI98 176 aa7.45□□□□□ -1.22
CDCA3-201ENST00000229265 LINC00242Q5T6M2 205 aa7.45□□□□□ -1.22
CDCA3-201ENST00000229265 CEMP1Q6PRD7 247 aaPredicted RBP7.45□□□□□ -1.22
CDCA3-201ENST00000229265 Q6ZUT4 128 aa7.45□□□□□ -1.22
CDCA3-201ENST00000229265 GTF2H5Q6ZYL4 71 aa7.45□□□□□ -1.22
CDCA3-201ENST00000229265 DEFB104AQ8WTQ1 72 aa7.45□□□□□ -1.22
CDCA3-201ENST00000229265 TTTY13Q9BZ97 58 aa7.45□□□□□ -1.22
CDCA3-201ENST00000229265 VPS13DQ5THJ4 4388 aa7.45□□□□□ -1.22
CDCA3-201ENST00000229265 IGLV5-39A0A0G2JS06 123 aa7.44□□□□□ -1.22
CDCA3-201ENST00000229265 IFITM1P13164 125 aa7.44□□□□□ -1.22
CDCA3-201ENST00000229265 GYPEP15421 78 aa7.44□□□□□ -1.22
CDCA3-201ENST00000229265 EMP1P54849 157 aa7.44□□□□□ -1.22
CDCA3-201ENST00000229265 HERV-K104P63124 156 aa7.44□□□□□ -1.22
CDCA3-201ENST00000229265 CIRBPQ14011 172 aaKnown RBP7.44□□□□□ -1.22
CDCA3-201ENST00000229265 VAMP3Q15836 100 aa7.44□□□□□ -1.22
CDCA3-201ENST00000229265 MRPL23Q16540 153 aaKnown RBP7.44□□□□□ -1.22
CDCA3-201ENST00000229265 DEFB135Q30KP9 77 aa7.44□□□□□ -1.22
CDCA3-201ENST00000229265 C12orf74Q32Q52 190 aa7.44□□□□□ -1.22
CDCA3-201ENST00000229265 ZFAND6Q6FIF0 208 aa7.44□□□□□ -1.22
CDCA3-201ENST00000229265 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
CDCA3-201ENST00000229265 FXYD2P54710 66 aa7.43□□□□□ -1.22
CDCA3-201ENST00000229265 TCTAP57738 103 aa7.43□□□□□ -1.22
CDCA3-201ENST00000229265 RPL24P83731 157 aaKnown RBP7.43□□□□□ -1.22
CDCA3-201ENST00000229265 IGHV3-30P01768 117 aa7.42□□□□□ -1.22
CDCA3-201ENST00000229265 IGHV3-30-5P0DP03 117 aa7.42□□□□□ -1.22
CDCA3-201ENST00000229265 CASC10Q5T4H9 136 aa7.42□□□□□ -1.22
CDCA3-201ENST00000229265 SPANXDQ9BXN6 97 aa7.42□□□□□ -1.22
CDCA3-201ENST00000229265 C11orf68Q9H3H3 251 aaKnown RBP7.42□□□□□ -1.22
CDCA3-201ENST00000229265 SPANXCQ9NY87 97 aa7.42□□□□□ -1.22
CDCA3-201ENST00000229265 CDKN2A-AS1Q9UH64 79 aa7.42□□□□□ -1.22
CDCA3-201ENST00000229265 FRAS1Q86XX4 4008 aa7.42□□□□□ -1.22
CDCA3-201ENST00000229265 DNAH10Q8IVF4 4471 aa7.42□□□□□ -1.22
CDCA3-201ENST00000229265 KMT2AQ03164 3969 aa7.41□□□□□ -1.22
CDCA3-201ENST00000229265 NACAE9PAV3 2078 aa7.41□□□□□ -1.22
CDCA3-201ENST00000229265 GAGE10A6NGK3 116 aa7.41□□□□□ -1.22
CDCA3-201ENST00000229265 NDUFA1O15239 70 aa7.41□□□□□ -1.22
CDCA3-201ENST00000229265 NHLRC4P0CG21 123 aaPredicted RBP7.41□□□□□ -1.22
CDCA3-201ENST00000229265 FABP2P12104 132 aa7.41□□□□□ -1.22
CDCA3-201ENST00000229265 CHCHD5Q9BSY4 110 aa7.41□□□□□ -1.22
CDCA3-201ENST00000229265 NDUFA12Q9UI09 145 aa7.41□□□□□ -1.22
CDCA3-201ENST00000229265 LOC100131303A0A0U1RQF7 123 aa7.4□□□□□ -1.22
CDCA3-201ENST00000229265 A0A1W2PPM0 123 aa7.4□□□□□ -1.22
CDCA3-201ENST00000229265 IGLL5B9A064 214 aa7.4□□□□□ -1.22
CDCA3-201ENST00000229265 TSPEAR-AS2P59090 65 aa7.4□□□□□ -1.22
CDCA3-201ENST00000229265 SS18Q15532 418 aa7.4□□□□□ -1.22
CDCA3-201ENST00000229265 NHP2Q9NX24 153 aaKnown RBP7.4□□□□□ -1.22
CDCA3-201ENST00000229265 COX6A2Q02221 97 aa7.39□□□□□ -1.23
CDCA3-201ENST00000229265 LELP1Q5T871 98 aa7.39□□□□□ -1.23
CDCA3-201ENST00000229265 LYRM7Q5U5X0 104 aa7.39□□□□□ -1.23
CDCA3-201ENST00000229265 MUC7Q8TAX7 377 aa7.39□□□□□ -1.23
CDCA3-201ENST00000229265 ICOSQ9Y6W8 199 aa7.39□□□□□ -1.23
CDCA3-201ENST00000229265 A0A087WZ39 114 aa7.38□□□□□ -1.23
CDCA3-201ENST00000229265 TRAV13-1A0A0B4J241 112 aa7.38□□□□□ -1.23
CDCA3-201ENST00000229265 IGHV3OR16-9A0A0B4J2B5 98 aa7.38□□□□□ -1.23
CDCA3-201ENST00000229265 A0A0B4J2C4 111 aa7.38□□□□□ -1.23
CDCA3-201ENST00000229265 F5H768 121 aa7.38□□□□□ -1.23
CDCA3-201ENST00000229265 H3BUT2 72 aa7.38□□□□□ -1.23
CDCA3-201ENST00000229265 LINC00959A0A1B0GUT2 108 aa7.37□□□□□ -1.23
CDCA3-201ENST00000229265 SMIM1B2RUZ4 78 aa7.37□□□□□ -1.23
CDCA3-201ENST00000229265 TMEM262E9PQX1 116 aa7.37□□□□□ -1.23
CDCA3-201ENST00000229265 K7EP34 96 aa7.37□□□□□ -1.23
CDCA3-201ENST00000229265 GAGE6Q13070 117 aa7.37□□□□□ -1.23
CDCA3-201ENST00000229265 C10orf126Q8N4M7 172 aa7.37□□□□□ -1.23
CDCA3-201ENST00000229265 PRO1854Q9UHT4 67 aa7.37□□□□□ -1.23
CDCA3-201ENST00000229265 DNAH6Q9C0G6 4158 aa7.37□□□□□ -1.23
CDCA3-201ENST00000229265 TRBV20-1A0A075B6N2 111 aa7.36□□□□□ -1.23
CDCA3-201ENST00000229265 TRAV8-3A0A0A6YYJ7 113 aa7.36□□□□□ -1.23
CDCA3-201ENST00000229265 K7EP13 123 aa7.36□□□□□ -1.23
CDCA3-201ENST00000229265 SPINK8P0C7L1 97 aa7.36□□□□□ -1.23
CDCA3-201ENST00000229265 RBX1P62877 108 aa7.36□□□□□ -1.23
CDCA3-201ENST00000229265 MIAQ16674 131 aa7.36□□□□□ -1.23
CDCA3-201ENST00000229265 RNASE13Q5GAN3 156 aaKnown RBP7.36□□□□□ -1.23
CDCA3-201ENST00000229265 MUSTN1Q8IVN3 82 aa7.36□□□□□ -1.23
CDCA3-201ENST00000229265 RAB37Q96AX2 223 aa7.36□□□□□ -1.23
CDCA3-201ENST00000229265 LITAFQ99732 161 aa7.36□□□□□ -1.23
CDCA3-201ENST00000229265 IGLV4-60A0A075B6I1 120 aa7.35□□□□□ -1.23
CDCA3-201ENST00000229265 F8W1H4 67 aa7.35□□□□□ -1.23
CDCA3-201ENST00000229265 CFC1BP0CG36 223 aa7.35□□□□□ -1.23
CDCA3-201ENST00000229265 CFC1P0CG37 223 aa7.35□□□□□ -1.23
CDCA3-201ENST00000229265 ZNF625Q96I27 306 aaPredicted RBP7.35□□□□□ -1.23
CDCA3-201ENST00000229265 SPCS1Q9Y6A9 102 aa7.34□□□□□ -1.23
CDCA3-201ENST00000229265 A0A096LPF7 62 aa7.33□□□□□ -1.24
CDCA3-201ENST00000229265 TRAV8-4A0A0B4J246 113 aa7.33□□□□□ -1.24
CDCA3-201ENST00000229265 C3orf84H3BNL1 204 aa7.33□□□□□ -1.24
CDCA3-201ENST00000229265 PRSS2P07478 247 aa7.33□□□□□ -1.24
CDCA3-201ENST00000229265 CD164L2Q6UWJ8 174 aa7.33□□□□□ -1.24
CDCA3-201ENST00000229265 LYPD5Q6UWN5 251 aa7.33□□□□□ -1.24
CDCA3-201ENST00000229265 COX7B2Q8TF08 81 aa7.33□□□□□ -1.24
CDCA3-201ENST00000229265 ERG28Q9UKR5 140 aa7.33□□□□□ -1.24
CDCA3-201ENST00000229265 CELA1Q9UNI1 258 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms