RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 TMEM238LA0A1B0GVL6 79 aa12.48□□□□□ -0.41
CBX1-201ENST00000225603 A6NJY4 79 aa12.48□□□□□ -0.41
CBX1-201ENST00000225603 MRPL23Q16540 153 aaKnown RBP12.48□□□□□ -0.41
CBX1-201ENST00000225603 ICOSQ9Y6W8 199 aa12.48□□□□□ -0.41
CBX1-201ENST00000225603 TRAV10A0A0B4J240 114 aa12.47□□□□□ -0.41
CBX1-201ENST00000225603 Q6ZUT4 128 aa12.47□□□□□ -0.41
CBX1-201ENST00000225603 IGHV3-64A0A075B6Q5 118 aa12.47□□□□□ -0.41
CBX1-201ENST00000225603 TRBV6-8A0A0A6YYG3 113 aa12.47□□□□□ -0.41
CBX1-201ENST00000225603 FBN3Q75N90 2809 aa12.47□□□□□ -0.41
CBX1-201ENST00000225603 H3BNG1 76 aa12.46□□□□□ -0.42
CBX1-201ENST00000225603 TINCRA0A1B0GVN0 87 aa12.45□□□□□ -0.42
CBX1-201ENST00000225603 UBE2D1P51668 147 aa12.45□□□□□ -0.42
CBX1-201ENST00000225603 TMEM243Q9BU79 118 aa12.45□□□□□ -0.42
CBX1-201ENST00000225603 IGHV3-30P01768 117 aa12.44□□□□□ -0.42
CBX1-201ENST00000225603 IGHV3-30-5P0DP03 117 aa12.44□□□□□ -0.42
CBX1-201ENST00000225603 TIMM21Q9BVV7 248 aa12.44□□□□□ -0.42
CBX1-201ENST00000225603 IGHV3-30-3P0DP02 117 aa12.43□□□□□ -0.42
CBX1-201ENST00000225603 OCIAD2Q56VL3 154 aa12.43□□□□□ -0.42
CBX1-201ENST00000225603 GAGE6Q13070 117 aa12.42□□□□□ -0.42
CBX1-201ENST00000225603 RBX1P62877 108 aa12.41□□□□□ -0.42
CBX1-201ENST00000225603 LYPD5Q6UWN5 251 aa12.41□□□□□ -0.42
CBX1-201ENST00000225603 CHCHD5Q9BSY4 110 aa12.41□□□□□ -0.42
CBX1-201ENST00000225603 PGPEP1Q9NXJ5 209 aa12.41□□□□□ -0.42
CBX1-201ENST00000225603 IGHV1-58A0A0C4DH39 117 aa12.41□□□□□ -0.42
CBX1-201ENST00000225603 DGAT2L7PQ6IED9 249 aa12.41□□□□□ -0.42
CBX1-201ENST00000225603 SH2D6Q7Z4S9 175 aa12.41□□□□□ -0.42
CBX1-201ENST00000225603 C10orf126Q8N4M7 172 aa12.41□□□□□ -0.42
CBX1-201ENST00000225603 TRAV8-3A0A0A6YYJ7 113 aa12.4□□□□□ -0.42
CBX1-201ENST00000225603 UBE2L6O14933 153 aa12.39□□□□□ -0.43
CBX1-201ENST00000225603 GEMIN7Q9H840 131 aaKnown RBP12.39□□□□□ -0.43
CBX1-201ENST00000225603 A0A0J9YXY3 114 aa12.38□□□□□ -0.43
CBX1-201ENST00000225603 APOMO95445 188 aa12.38□□□□□ -0.43
CBX1-201ENST00000225603 SPINK8P0C7L1 97 aa12.38□□□□□ -0.43
CBX1-201ENST00000225603 ESRGQ1W209 222 aa12.38□□□□□ -0.43
CBX1-201ENST00000225603 TMEM238C9JI98 176 aa12.37□□□□□ -0.43
CBX1-201ENST00000225603 CFC1BP0CG36 223 aa12.37□□□□□ -0.43
CBX1-201ENST00000225603 CFC1P0CG37 223 aa12.37□□□□□ -0.43
CBX1-201ENST00000225603 TIRAPP58753 221 aa12.37□□□□□ -0.43
CBX1-201ENST00000225603 CSDC2Q9Y534 153 aaKnown RBP12.37□□□□□ -0.43
CBX1-201ENST00000225603 IGLV5-45A0A087WSX0 123 aa12.37□□□□□ -0.43
CBX1-201ENST00000225603 H7C423 109 aa12.37□□□□□ -0.43
CBX1-201ENST00000225603 TSPAN13O95857 204 aa12.37□□□□□ -0.43
CBX1-201ENST00000225603 LELP1Q5T871 98 aa12.37□□□□□ -0.43
CBX1-201ENST00000225603 Q8N3U1 123 aa12.37□□□□□ -0.43
CBX1-201ENST00000225603 IGLV4-60A0A075B6I1 120 aa12.36□□□□□ -0.43
CBX1-201ENST00000225603 TMEM262E9PQX1 116 aa12.35□□□□□ -0.43
CBX1-201ENST00000225603 NDUFA12Q9UI09 145 aa12.35□□□□□ -0.43
CBX1-201ENST00000225603 K7ERU9 68 aa12.35□□□□□ -0.43
CBX1-201ENST00000225603 CDKN2A-AS1Q9UH64 79 aa12.35□□□□□ -0.43
CBX1-201ENST00000225603 CBY1Q9Y3M2 126 aa12.35□□□□□ -0.43
CBX1-201ENST00000225603 RNF151Q2KHN1 245 aa12.34□□□□□ -0.43
CBX1-201ENST00000225603 C15orf53Q8NAA6 179 aa12.34□□□□□ -0.43
CBX1-201ENST00000225603 CDC42SE2Q9NRR3 84 aa12.34□□□□□ -0.43
CBX1-201ENST00000225603 H3BMG7 143 aa12.34□□□□□ -0.43
CBX1-201ENST00000225603 LITAFQ99732 161 aa12.34□□□□□ -0.43
CBX1-201ENST00000225603 A4D1N5 150 aa12.33□□□□□ -0.44
CBX1-201ENST00000225603 COX6A2Q02221 97 aa12.33□□□□□ -0.44
CBX1-201ENST00000225603 SMAGPQ0VAQ4 97 aa12.33□□□□□ -0.44
CBX1-201ENST00000225603 FAM19A3Q7Z5A8 133 aa12.33□□□□□ -0.44
CBX1-201ENST00000225603 MUSTN1Q8IVN3 82 aa12.33□□□□□ -0.44
CBX1-201ENST00000225603 HERVK_113P63121 156 aa12.33□□□□□ -0.44
CBX1-201ENST00000225603 RPL24P83731 157 aaKnown RBP12.33□□□□□ -0.44
CBX1-201ENST00000225603 LINC00242Q5T6M2 205 aa12.33□□□□□ -0.44
CBX1-201ENST00000225603 ZFAND6Q6FIF0 208 aa12.33□□□□□ -0.44
CBX1-201ENST00000225603 TMEM101Q96IK0 257 aa12.32□□□□□ -0.44
CBX1-201ENST00000225603 F8W1H4 67 aa12.31□□□□□ -0.44
CBX1-201ENST00000225603 PRO1854Q9UHT4 67 aa12.31□□□□□ -0.44
CBX1-201ENST00000225603 WFDC10BQ8IUB3 73 aa12.31□□□□□ -0.44
CBX1-201ENST00000225603 CSMD3Q7Z407 3707 aa12.31□□□□□ -0.44
CBX1-201ENST00000225603 TRAV13-1A0A0B4J241 112 aa12.3□□□□□ -0.44
CBX1-201ENST00000225603 A0A1B0GUV1 79 aa12.3□□□□□ -0.44
CBX1-201ENST00000225603 EIF4EBP3O60516 100 aaPredicted RBP12.3□□□□□ -0.44
CBX1-201ENST00000225603 SPANXDQ9BXN6 97 aa12.3□□□□□ -0.44
CBX1-201ENST00000225603 SPANXCQ9NY87 97 aa12.3□□□□□ -0.44
CBX1-201ENST00000225603 DYNC2H1Q8NCM8 4307 aaKnown RBP12.29□□□□□ -0.44
CBX1-201ENST00000225603 A0A0B4J2C4 111 aa12.29□□□□□ -0.44
CBX1-201ENST00000225603 LOC107984156A0A0G2JMH3 177 aa12.29□□□□□ -0.44
CBX1-201ENST00000225603 SFTA2Q6UW10 78 aa12.29□□□□□ -0.44
CBX1-201ENST00000225603 ARL17AQ8IVW1 177 aa12.29□□□□□ -0.44
CBX1-201ENST00000225603 DNAH7Q8WXX0 4024 aa12.29□□□□□ -0.44
CBX1-201ENST00000225603 TGP01266 2768 aa12.29□□□□□ -0.44
CBX1-201ENST00000225603 IGLV5-39A0A0G2JS06 123 aa12.29□□□□□ -0.44
CBX1-201ENST00000225603 ADAMTSL4-AS1Q5T5F5 129 aa12.29□□□□□ -0.44
CBX1-201ENST00000225603 WFDC2Q14508 124 aa12.28□□□□□ -0.44
CBX1-201ENST00000225603 LYRM7Q5U5X0 104 aa12.28□□□□□ -0.44
CBX1-201ENST00000225603 PRO0461Q9UI25 63 aa12.28□□□□□ -0.44
CBX1-201ENST00000225603 LINC00588Q9Y4M8 146 aa12.28□□□□□ -0.44
CBX1-201ENST00000225603 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.27□□□□□ -0.44
CBX1-201ENST00000225603 NDUFA1O15239 70 aa12.27□□□□□ -0.44
CBX1-201ENST00000225603 APLNQ9ULZ1 77 aa12.27□□□□□ -0.44
CBX1-201ENST00000225603 IGKV3OR2-268A0A0C4DH90 116 aa12.27□□□□□ -0.45
CBX1-201ENST00000225603 MIAQ16674 131 aa12.27□□□□□ -0.45
CBX1-201ENST00000225603 TIMM17BO60830 172 aa12.26□□□□□ -0.45
CBX1-201ENST00000225603 VPS25Q9BRG1 176 aa12.26□□□□□ -0.45
CBX1-201ENST00000225603 SMIM1B2RUZ4 78 aa12.26□□□□□ -0.45
CBX1-201ENST00000225603 IGHV3-33P01772 117 aa12.26□□□□□ -0.45
CBX1-201ENST00000225603 PSMB2P49721 201 aa12.26□□□□□ -0.45
CBX1-201ENST00000225603 CLPSL2Q6UWE3 100 aa12.26□□□□□ -0.45
CBX1-201ENST00000225603 NUPR2A6NF83 97 aa12.25□□□□□ -0.45
CBX1-201ENST00000225603 PRSS2P07478 247 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms