RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 HTN3P15516 51 aa11.95□□□□□ -0.5
RABGGTA-201ENST00000216840 SAMD5Q5TGI4 173 aa11.95□□□□□ -0.5
RABGGTA-201ENST00000216840 TMEM238LA0A1B0GVL6 79 aa11.94□□□□□ -0.5
RABGGTA-201ENST00000216840 A6NJY4 79 aa11.94□□□□□ -0.5
RABGGTA-201ENST00000216840 IGKV3OR2-268A0A0C4DH90 116 aa11.93□□□□□ -0.5
RABGGTA-201ENST00000216840 A0A1B0GUV1 79 aa11.93□□□□□ -0.5
RABGGTA-201ENST00000216840 A0A1W2PPM0 123 aa11.93□□□□□ -0.5
RABGGTA-201ENST00000216840 TMEM238C9JI98 176 aa11.93□□□□□ -0.5
RABGGTA-201ENST00000216840 LITAFQ99732 161 aa11.93□□□□□ -0.5
RABGGTA-201ENST00000216840 TMEM262E9PQX1 116 aa11.93□□□□□ -0.5
RABGGTA-201ENST00000216840 RBX1P62877 108 aa11.93□□□□□ -0.5
RABGGTA-201ENST00000216840 ANK2Q01484 3957 aa11.93□□□□□ -0.5
RABGGTA-201ENST00000216840 IGLL5B9A064 214 aa11.92□□□□□ -0.5
RABGGTA-201ENST00000216840 NDUFA1O15239 70 aa11.91□□□□□ -0.5
RABGGTA-201ENST00000216840 MRPL23Q16540 153 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-201ENST00000216840 MUSTN1Q8IVN3 82 aa11.9□□□□□ -0.51
RABGGTA-201ENST00000216840 C11orf68Q9H3H3 251 aaKnown RBP11.9□□□□□ -0.51
RABGGTA-201ENST00000216840 ICOSQ9Y6W8 199 aa11.9□□□□□ -0.51
RABGGTA-201ENST00000216840 LINC00959A0A1B0GUT2 108 aa11.89□□□□□ -0.51
RABGGTA-201ENST00000216840 ADAMTSL4-AS1Q5T5F5 129 aa11.89□□□□□ -0.51
RABGGTA-201ENST00000216840 GAGE10A6NGK3 116 aa11.88□□□□□ -0.51
RABGGTA-201ENST00000216840 FABP2P12104 132 aa11.88□□□□□ -0.51
RABGGTA-201ENST00000216840 IGHV3OR16-9A0A0B4J2B5 98 aa11.88□□□□□ -0.51
RABGGTA-201ENST00000216840 K7EP34 96 aa11.88□□□□□ -0.51
RABGGTA-201ENST00000216840 APOMO95445 188 aa11.88□□□□□ -0.51
RABGGTA-201ENST00000216840 SH2D6Q7Z4S9 175 aa11.88□□□□□ -0.51
RABGGTA-201ENST00000216840 SPANXDQ9BXN6 97 aa11.88□□□□□ -0.51
RABGGTA-201ENST00000216840 Q9H8V8 135 aa11.88□□□□□ -0.51
RABGGTA-201ENST00000216840 SPANXCQ9NY87 97 aa11.88□□□□□ -0.51
RABGGTA-201ENST00000216840 TIMM17BO60830 172 aa11.87□□□□□ -0.51
RABGGTA-201ENST00000216840 CFC1BP0CG36 223 aa11.87□□□□□ -0.51
RABGGTA-201ENST00000216840 CFC1P0CG37 223 aa11.87□□□□□ -0.51
RABGGTA-201ENST00000216840 A4D1N5 150 aa11.87□□□□□ -0.51
RABGGTA-201ENST00000216840 GTF2H5Q6ZYL4 71 aa11.87□□□□□ -0.51
RABGGTA-201ENST00000216840 RPL24P83731 157 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-201ENST00000216840 ZNF625Q96I27 306 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-201ENST00000216840 SPCS1Q9Y6A9 102 aa11.86□□□□□ -0.51
RABGGTA-201ENST00000216840 MIAQ16674 131 aa11.85□□□□□ -0.51
RABGGTA-201ENST00000216840 PGPEP1Q9NXJ5 209 aa11.85□□□□□ -0.51
RABGGTA-201ENST00000216840 PRB2P02812 416 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-201ENST00000216840 LELP1Q5T871 98 aa11.85□□□□□ -0.51
RABGGTA-201ENST00000216840 Q8N3U1 123 aa11.85□□□□□ -0.51
RABGGTA-201ENST00000216840 NOTCH1P46531 2555 aa11.84□□□□□ -0.51
RABGGTA-201ENST00000216840 A0A087WZ39 114 aa11.84□□□□□ -0.51
RABGGTA-201ENST00000216840 A0A0J9YWU9 116 aa11.84□□□□□ -0.51
RABGGTA-201ENST00000216840 SS18Q15532 418 aa11.84□□□□□ -0.51
RABGGTA-201ENST00000216840 CLPSL2Q6UWE3 100 aa11.84□□□□□ -0.51
RABGGTA-201ENST00000216840 Q6ZTC4 211 aa11.84□□□□□ -0.51
RABGGTA-201ENST00000216840 EIF4EBP3O60516 100 aaPredicted RBP11.83□□□□□ -0.51
RABGGTA-201ENST00000216840 PRSS2P07478 247 aa11.83□□□□□ -0.51
RABGGTA-201ENST00000216840 COX7B2Q8TF08 81 aa11.83□□□□□ -0.51
RABGGTA-201ENST00000216840 TENM3Q9P273 2699 aa11.83□□□□□ -0.52
RABGGTA-201ENST00000216840 C5orf38Q86SI9 138 aa11.83□□□□□ -0.52
RABGGTA-201ENST00000216840 LINC00269Q8N2A0 174 aa11.83□□□□□ -0.52
RABGGTA-201ENST00000216840 H3BNG1 76 aa11.82□□□□□ -0.52
RABGGTA-201ENST00000216840 TSPAN13O95857 204 aa11.82□□□□□ -0.52
RABGGTA-201ENST00000216840 CIRBPQ14011 172 aaKnown RBP11.82□□□□□ -0.52
RABGGTA-201ENST00000216840 K7EIL1 84 aa11.81□□□□□ -0.52
RABGGTA-201ENST00000216840 XCL1P47992 114 aa11.81□□□□□ -0.52
RABGGTA-201ENST00000216840 LYPD5Q6UWN5 251 aa11.81□□□□□ -0.52
RABGGTA-201ENST00000216840 PRO1854Q9UHT4 67 aa11.81□□□□□ -0.52
RABGGTA-201ENST00000216840 A0A0B4J2C4 111 aa11.8□□□□□ -0.52
RABGGTA-201ENST00000216840 ANGP03950 147 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-201ENST00000216840 HERV-K104P63124 156 aa11.8□□□□□ -0.52
RABGGTA-201ENST00000216840 KPRPQ5T749 579 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-201ENST00000216840 DAND5Q8N907 189 aa11.8□□□□□ -0.52
RABGGTA-201ENST00000216840 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-201ENST00000216840 NANOS2P60321 138 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-201ENST00000216840 NPC2P61916 151 aa11.8□□□□□ -0.52
RABGGTA-201ENST00000216840 TOMM7Q9P0U1 55 aa11.8□□□□□ -0.52
RABGGTA-201ENST00000216840 IFITM1P13164 125 aa11.79□□□□□ -0.52
RABGGTA-201ENST00000216840 REG3AQ06141 175 aa11.79□□□□□ -0.52
RABGGTA-201ENST00000216840 C11orf45Q8TAV5 145 aa11.79□□□□□ -0.52
RABGGTA-201ENST00000216840 MEIG1Q5JSS6 88 aa11.78□□□□□ -0.52
RABGGTA-201ENST00000216840 NBEAL1Q6ZS30 2694 aa11.77□□□□□ -0.52
RABGGTA-201ENST00000216840 A0A0U1RRA0 63 aa11.77□□□□□ -0.52
RABGGTA-201ENST00000216840 MDFIQ99750 246 aa11.77□□□□□ -0.52
RABGGTA-201ENST00000216840 SPATA25Q9BR10 227 aa11.77□□□□□ -0.52
RABGGTA-201ENST00000216840 IGHV3-33P01772 117 aa11.77□□□□□ -0.53
RABGGTA-201ENST00000216840 TM2D3Q9BRN9 247 aa11.77□□□□□ -0.53
RABGGTA-201ENST00000216840 LINC01561Q8N1V8 128 aa11.76□□□□□ -0.53
RABGGTA-201ENST00000216840 LINC00308Q8TCZ7 52 aa11.76□□□□□ -0.53
RABGGTA-201ENST00000216840 CHCHD10Q8WYQ3 142 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-201ENST00000216840 CD164L2Q6UWJ8 174 aa11.75□□□□□ -0.53
RABGGTA-201ENST00000216840 DEFB131BA0A096LNP1 70 aa11.75□□□□□ -0.53
RABGGTA-201ENST00000216840 DEFB121Q5J5C9 76 aa11.75□□□□□ -0.53
RABGGTA-201ENST00000216840 SFTA2Q6UW10 78 aa11.75□□□□□ -0.53
RABGGTA-201ENST00000216840 IGLV10-54A0A075B6I4 117 aa11.74□□□□□ -0.53
RABGGTA-201ENST00000216840 LOC107984156A0A0G2JMH3 177 aa11.74□□□□□ -0.53
RABGGTA-201ENST00000216840 ARL17AQ8IVW1 177 aa11.74□□□□□ -0.53
RABGGTA-201ENST00000216840 MRAPQ8TCY5 172 aa11.74□□□□□ -0.53
RABGGTA-201ENST00000216840 ERG28Q9UKR5 140 aa11.74□□□□□ -0.53
RABGGTA-201ENST00000216840 SOSTDC1Q6X4U4 206 aa11.73□□□□□ -0.53
RABGGTA-201ENST00000216840 PRR34Q9NV39 138 aa11.72□□□□□ -0.53
RABGGTA-201ENST00000216840 KLK12Q9UKR0 248 aa11.72□□□□□ -0.53
RABGGTA-201ENST00000216840 COX7A2LO14548 114 aa11.72□□□□□ -0.53
RABGGTA-201ENST00000216840 H3BMG7 143 aa11.71□□□□□ -0.53
RABGGTA-201ENST00000216840 H7C2G1 150 aa11.71□□□□□ -0.53
RABGGTA-201ENST00000216840 C6orf226Q5I0X4 101 aa11.71□□□□□ -0.53
RABGGTA-201ENST00000216840 Q8IZM0 81 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms