RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 C3orf79P0CE67 100 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 UBE2D3P61077 147 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 UBE2D2P62837 147 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 SERF2P84101 59 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 DEFB112Q30KQ8 113 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 Q5VSD8 79 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 C10orf113Q5VZT2 155 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 C6orf201Q7Z4U5 140 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 FAM223AQ8IWN6 122 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 WFDC9Q8NEX5 89 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 DEFB105AQ8NG35 78 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 LCN9Q8WX39 176 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 S100A16Q96FQ6 103 aaKnown RBP0.22□□□□□ -2.37
CDKN3-201ENST00000216414 GAFA1Q96PS6 74 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 PLXNA4Q9HCM2 1894 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 ARHGEF12Q9NZN5 1544 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 PHIPQ8WWQ0 1821 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 PZPP20742 1482 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 BCL9LQ86UU0 1499 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 TEX14Q8IWB6 1497 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 MRC2Q9UBG0 1479 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 SIPA1L3O60292 1781 aaPredicted RBP0.22□□□□□ -2.37
CDKN3-201ENST00000216414 COL14A1Q05707 1796 aaKnown RBP0.22□□□□□ -2.37
CDKN3-201ENST00000216414 UACAQ9BZF9 1416 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 NCOA3Q9Y6Q9 1424 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 KMT2DO14686 5537 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 ARAP2Q8WZ64 1704 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 PLIN4Q96Q06 1357 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 GOLGA4Q13439 2230 aaKnown RBP0.21□□□□□ -2.38
CDKN3-201ENST00000216414 MED13LQ71F56 2210 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 NHSL1Q5SYE7 1610 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 PTPN13Q12923 2485 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 DOCK1Q14185 1865 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 PDCD11Q14690 1871 aaKnown RBP0.21□□□□□ -2.38
CDKN3-201ENST00000216414 A0A0D9SG42 100 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 FAM223BA6NKX1 122 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 IQCF6A8MYZ5 107 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 PHGR1C9JFL3 82 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 GNG2P59768 71 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 ATP5EP2Q5VTU8 51 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 COX6B2Q6YFQ2 88 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 LINC00643Q86TS7 51 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 DEFB107AQ8IZN7 70 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 S100ZQ8WXG8 99 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 LSM10Q969L4 123 aaKnown RBP0.21□□□□□ -2.38
CDKN3-201ENST00000216414 LINC01600Q96MT4 127 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 Q96NJ1 140 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 FAM103A1Q9BTL3 118 aaKnown RBP0.21□□□□□ -2.38
CDKN3-201ENST00000216414 CDC42SE2Q9NRR3 84 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 HIGD1BQ9P298 99 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 KIF20BQ96Q89 1820 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 ZNF236Q9UL36 1845 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 EPRSP07814 1512 aaKnown RBP0.21□□□□□ -2.38
CDKN3-201ENST00000216414 CACNA1EQ15878 2313 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 LAMB1P07942 1786 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 CASZ1Q86V15 1759 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 GOLGA3Q08378 1498 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 MAGI1Q96QZ7 1491 aaPredicted RBP0.21□□□□□ -2.38
CDKN3-201ENST00000216414 MLH3Q9UHC1 1453 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 SUPT6HQ7KZ85 1726 aaKnown RBP0.21□□□□□ -2.38
CDKN3-201ENST00000216414 IFT172Q9UG01 1749 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 CACNA1CQ13936 2221 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 NAV2Q8IVL1 2488 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 CLTCQ00610 1675 aaKnown RBP0.21□□□□□ -2.38
CDKN3-201ENST00000216414 KIF21AQ7Z4S6 1674 aa0.21□□□□□ -2.38
CDKN3-201ENST00000216414 TANC1Q9C0D5 1861 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 PATJQ8NI35 1801 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 ADGRB1O14514 1584 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 COL6A6A6NMZ7 2263 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 PKDREJQ9NTG1 2253 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 KDM3BQ7LBC6 1761 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 EHBP1L1Q8N3D4 1523 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 F5P12259 2224 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 A0A087WTM6 91 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 MYMXA0A1B0GTQ4 84 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 LOC100130705A0A1B0GUX0 176 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 CLPSL1A2RUU4 121 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 UMAD1C9J7I0 102 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 F8WEM9 126 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 H7BZZ5 65 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 K7EQZ3 153 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 SPRR1AP35321 89 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 UBL5Q9BZL1 73 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 ABRACLQ9P1F3 81 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 GNG13Q9P2W3 67 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 APLNQ9ULZ1 77 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 TIMM8BQ9Y5J9 83 aaPredicted RBP0.2□□□□□ -2.38
CDKN3-201ENST00000216414 LRRC37AA6NMS7 1700 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 PRDM2Q13029 1718 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 USP24Q9UPU5 2620 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 ATP10BO94823 1461 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 CCDC18Q5T9S5 1454 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 LRRC9Q6ZRR7 1453 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 KDM5AP29375 1690 aaKnown RBP0.2□□□□□ -2.38
CDKN3-201ENST00000216414 COL4A5P29400 1685 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 PLXNA1Q9UIW2 1896 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 ASH1LQ9NR48 2969 aaKnown RBP0.2□□□□□ -2.38
CDKN3-201ENST00000216414 EDC4Q6P2E9 1401 aaKnown RBP0.2□□□□□ -2.38
CDKN3-201ENST00000216414 VPS8Q8N3P4 1428 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 KIAA0556O60303 1618 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms