RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 ZNF625Q96I27 306 aaPredicted RBP5.59□□□□□ -1.51
HMGXB4-201ENST00000216106 Q9H8V8 135 aa5.59□□□□□ -1.51
HMGXB4-201ENST00000216106 IGHV4-28A0A0C4DH34 117 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 NDUFA1O15239 70 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 F5H768 121 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 K7ERU9 68 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 WFDC2Q14508 124 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 MIAQ16674 131 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 ATP6V0E2Q8NHE4 81 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 SPANXDQ9BXN6 97 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 SPANXCQ9NY87 97 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 PSMB2P49721 201 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 WFDC9Q8NEX5 89 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 PRO0255Q9UI72 69 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 A0A0U1RRA0 63 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 LYRM9A8MSI8 78 aa5.58□□□□□ -1.52
HMGXB4-201ENST00000216106 FBN1P35555 2871 aaKnown RBP5.57□□□□□ -1.52
HMGXB4-201ENST00000216106 ANK2Q01484 3957 aa5.57□□□□□ -1.52
HMGXB4-201ENST00000216106 A0A0B4J2C4 111 aa5.57□□□□□ -1.52
HMGXB4-201ENST00000216106 IGHV4-30-4P0DP06 118 aa5.57□□□□□ -1.52
HMGXB4-201ENST00000216106 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.57□□□□□ -1.52
HMGXB4-201ENST00000216106 F8W1H4 67 aa5.57□□□□□ -1.52
HMGXB4-201ENST00000216106 IGHV3-33P01772 117 aa5.57□□□□□ -1.52
HMGXB4-201ENST00000216106 CELA1Q9UNI1 258 aa5.57□□□□□ -1.52
HMGXB4-201ENST00000216106 PKD1L1Q8TDX9 2849 aa5.57□□□□□ -1.52
HMGXB4-201ENST00000216106 PAX4O43316 350 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 Q1RN00 199 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 Q8NAQ8 132 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 PRO0461Q9UI25 63 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 STAB1Q9NY15 2570 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 TEX48A0A1B0GUV7 120 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 TMEM262E9PQX1 116 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 TCL1BO95988 128 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 SCGB1C2P0DMR2 95 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 DAD1P61803 113 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 PRIMA1Q86XR5 153 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 ERG28Q9UKR5 140 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 OXLD1Q5BKU9 147 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 LYRM7Q5U5X0 104 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 SH2D6Q7Z4S9 175 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 VPS25Q9BRG1 176 aa5.56□□□□□ -1.52
HMGXB4-201ENST00000216106 TIMM17BO60830 172 aa5.55□□□□□ -1.52
HMGXB4-201ENST00000216106 ETDBQ3ZM63 59 aa5.55□□□□□ -1.52
HMGXB4-201ENST00000216106 WIPF1O43516 503 aa5.55□□□□□ -1.52
HMGXB4-201ENST00000216106 CIRBPQ14011 172 aaKnown RBP5.55□□□□□ -1.52
HMGXB4-201ENST00000216106 KRTAP24-1Q3LI83 254 aa5.55□□□□□ -1.52
HMGXB4-201ENST00000216106 MEIG1Q5JSS6 88 aa5.55□□□□□ -1.52
HMGXB4-201ENST00000216106 CLPSL2Q6UWE3 100 aa5.55□□□□□ -1.52
HMGXB4-201ENST00000216106 TOMM7Q9P0U1 55 aa5.55□□□□□ -1.52
HMGXB4-201ENST00000216106 MIFP14174 115 aa5.54□□□□□ -1.52
HMGXB4-201ENST00000216106 CBY1Q9Y3M2 126 aa5.54□□□□□ -1.52
HMGXB4-201ENST00000216106 HTN3P15516 51 aa5.54□□□□□ -1.52
HMGXB4-201ENST00000216106 TRAV26-1A0A087WT03 109 aa5.54□□□□□ -1.52
HMGXB4-201ENST00000216106 IGHV3OR16-9A0A0B4J2B5 98 aa5.54□□□□□ -1.52
HMGXB4-201ENST00000216106 G3V4G9 280 aa5.54□□□□□ -1.52
HMGXB4-201ENST00000216106 RNF183Q96D59 192 aa5.54□□□□□ -1.52
HMGXB4-201ENST00000216106 MAST4O15021 2626 aa5.53□□□□□ -1.52
HMGXB4-201ENST00000216106 C5orf38Q86SI9 138 aa5.53□□□□□ -1.52
HMGXB4-201ENST00000216106 TRBV20-1A0A075B6N2 111 aa5.53□□□□□ -1.52
HMGXB4-201ENST00000216106 LINC00959A0A1B0GUT2 108 aa5.53□□□□□ -1.52
HMGXB4-201ENST00000216106 ATP5G1P05496 136 aa5.53□□□□□ -1.52
HMGXB4-201ENST00000216106 IFITM1P13164 125 aa5.53□□□□□ -1.52
HMGXB4-201ENST00000216106 SMCPP49901 116 aaPredicted RBP5.53□□□□□ -1.52
HMGXB4-201ENST00000216106 LINC00308Q8TCZ7 52 aa5.53□□□□□ -1.52
HMGXB4-201ENST00000216106 COX7B2Q8TF08 81 aa5.53□□□□□ -1.52
HMGXB4-201ENST00000216106 CMYA5Q8N3K9 4069 aa5.53□□□□□ -1.52
HMGXB4-201ENST00000216106 TRIAP1O43715 76 aa5.52□□□□□ -1.53
HMGXB4-201ENST00000216106 SPART-AS1P0CW21 52 aa5.52□□□□□ -1.53
HMGXB4-201ENST00000216106 XCL1P47992 114 aa5.52□□□□□ -1.53
HMGXB4-201ENST00000216106 KRTAP10-11P60412 298 aa5.52□□□□□ -1.53
HMGXB4-201ENST00000216106 SOSTDC1Q6X4U4 206 aa5.52□□□□□ -1.53
HMGXB4-201ENST00000216106 Q8N3U1 123 aa5.52□□□□□ -1.53
HMGXB4-201ENST00000216106 A0A1B0GUV1 79 aa5.52□□□□□ -1.53
HMGXB4-201ENST00000216106 HERV-K104P63124 156 aa5.52□□□□□ -1.53
HMGXB4-201ENST00000216106 A0A087WZ39 114 aa5.51□□□□□ -1.53
HMGXB4-201ENST00000216106 RPL13AP40429 203 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-201ENST00000216106 RETNQ9HD89 108 aa5.51□□□□□ -1.53
HMGXB4-201ENST00000216106 ICOSQ9Y6W8 199 aa5.51□□□□□ -1.53
HMGXB4-201ENST00000216106 C3orf56Q8N813 242 aa5.51□□□□□ -1.53
HMGXB4-201ENST00000216106 C11orf68Q9H3H3 251 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-201ENST00000216106 TRBV30A0A0K0K1B3 111 aa5.51□□□□□ -1.53
HMGXB4-201ENST00000216106 SS18Q15532 418 aa5.5□□□□□ -1.53
HMGXB4-201ENST00000216106 LINC00269Q8N2A0 174 aa5.5□□□□□ -1.53
HMGXB4-201ENST00000216106 C9JAW5 83 aa5.5□□□□□ -1.53
HMGXB4-201ENST00000216106 ANGP03950 147 aaKnown RBP5.5□□□□□ -1.53
HMGXB4-201ENST00000216106 IGLV10-54A0A075B6I4 117 aa5.49□□□□□ -1.53
HMGXB4-201ENST00000216106 MIR7-3HGQ8N6C7 128 aa5.49□□□□□ -1.53
HMGXB4-201ENST00000216106 ATXN8Q156A1 80 aa5.49□□□□□ -1.53
HMGXB4-201ENST00000216106 MRPL23Q16540 153 aaKnown RBP5.49□□□□□ -1.53
HMGXB4-201ENST00000216106 COPS9Q8WXC6 57 aa5.49□□□□□ -1.53
HMGXB4-201ENST00000216106 TENM3Q9P273 2699 aa5.49□□□□□ -1.53
HMGXB4-201ENST00000216106 SLC25A20O43772 301 aa5.48□□□□□ -1.53
HMGXB4-201ENST00000216106 LINC00158P58513 81 aa5.48□□□□□ -1.53
HMGXB4-201ENST00000216106 CLEC2BQ92478 149 aa5.48□□□□□ -1.53
HMGXB4-201ENST00000216106 J3QR89 54 aa5.48□□□□□ -1.53
HMGXB4-201ENST00000216106 COX6CP09669 75 aa5.48□□□□□ -1.53
HMGXB4-201ENST00000216106 PFN2P35080 140 aa5.48□□□□□ -1.53
HMGXB4-201ENST00000216106 REG3AQ06141 175 aa5.48□□□□□ -1.53
HMGXB4-201ENST00000216106 C6orf226Q5I0X4 101 aa5.48□□□□□ -1.53
HMGXB4-201ENST00000216106 FOXI1Q12951 378 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms