RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 SH2D6Q7Z4S9 175 aa12.84□□□□□ -0.35
CTSA-201ENST00000191018 RAB37Q96AX2 223 aa12.84□□□□□ -0.35
CTSA-201ENST00000191018 ICOSQ9Y6W8 199 aa12.84□□□□□ -0.35
CTSA-201ENST00000191018 K7ERJ3 54 aa12.83□□□□□ -0.36
CTSA-201ENST00000191018 TMEM262E9PQX1 116 aa12.82□□□□□ -0.36
CTSA-201ENST00000191018 LITAFQ99732 161 aa12.82□□□□□ -0.36
CTSA-201ENST00000191018 TMEM238C9JI98 176 aa12.81□□□□□ -0.36
CTSA-201ENST00000191018 VAMP3Q15836 100 aa12.81□□□□□ -0.36
CTSA-201ENST00000191018 IGHV3OR16-9A0A0B4J2B5 98 aa12.8□□□□□ -0.36
CTSA-201ENST00000191018 LINC00959A0A1B0GUT2 108 aa12.8□□□□□ -0.36
CTSA-201ENST00000191018 TMEM238LA0A1B0GVL6 79 aa12.8□□□□□ -0.36
CTSA-201ENST00000191018 A6NJY4 79 aa12.8□□□□□ -0.36
CTSA-201ENST00000191018 NDUFA1O15239 70 aa12.8□□□□□ -0.36
CTSA-201ENST00000191018 UBE2V1Q13404 147 aa12.8□□□□□ -0.36
CTSA-201ENST00000191018 IGKV3OR2-268A0A0C4DH90 116 aa12.8□□□□□ -0.36
CTSA-201ENST00000191018 H3BNG1 76 aa12.8□□□□□ -0.36
CTSA-201ENST00000191018 H3BUT2 72 aa12.8□□□□□ -0.36
CTSA-201ENST00000191018 KPRPQ5T749 579 aaPredicted RBP12.8□□□□□ -0.36
CTSA-201ENST00000191018 A0A0J9YWU9 116 aa12.79□□□□□ -0.36
CTSA-201ENST00000191018 LELP1Q5T871 98 aa12.79□□□□□ -0.36
CTSA-201ENST00000191018 Q6ZTC4 211 aa12.79□□□□□ -0.36
CTSA-201ENST00000191018 NOTCH1P46531 2555 aa12.79□□□□□ -0.36
CTSA-201ENST00000191018 K7EIL1 84 aa12.78□□□□□ -0.36
CTSA-201ENST00000191018 PRB2P02812 416 aaPredicted RBP12.78□□□□□ -0.36
CTSA-201ENST00000191018 MDFIQ99750 246 aa12.78□□□□□ -0.36
CTSA-201ENST00000191018 TENM3Q9P273 2699 aa12.78□□□□□ -0.36
CTSA-201ENST00000191018 NAA38Q9BRA0 125 aaKnown RBP12.78□□□□□ -0.36
CTSA-201ENST00000191018 CCL25O15444 150 aa12.76□□□□□ -0.37
CTSA-201ENST00000191018 TIMM17BO60830 172 aa12.76□□□□□ -0.37
CTSA-201ENST00000191018 SPANXDQ9BXN6 97 aa12.76□□□□□ -0.37
CTSA-201ENST00000191018 SPANXCQ9NY87 97 aa12.76□□□□□ -0.37
CTSA-201ENST00000191018 NBEAL1Q6ZS30 2694 aa12.76□□□□□ -0.37
CTSA-201ENST00000191018 A0A087WZ39 114 aa12.76□□□□□ -0.37
CTSA-201ENST00000191018 A0A1W2PPM0 123 aa12.76□□□□□ -0.37
CTSA-201ENST00000191018 TM2D3Q9BRN9 247 aa12.76□□□□□ -0.37
CTSA-201ENST00000191018 IGLL5B9A064 214 aa12.75□□□□□ -0.37
CTSA-201ENST00000191018 ADAMTSL4-AS1Q5T5F5 129 aa12.75□□□□□ -0.37
CTSA-201ENST00000191018 ZNF625Q96I27 306 aaPredicted RBP12.75□□□□□ -0.37
CTSA-201ENST00000191018 SPATA25Q9BR10 227 aa12.75□□□□□ -0.37
CTSA-201ENST00000191018 Q9H8V8 135 aa12.75□□□□□ -0.37
CTSA-201ENST00000191018 SS18Q15532 418 aa12.74□□□□□ -0.37
CTSA-201ENST00000191018 LYPD5Q6UWN5 251 aa12.74□□□□□ -0.37
CTSA-201ENST00000191018 MUSTN1Q8IVN3 82 aa12.74□□□□□ -0.37
CTSA-201ENST00000191018 Q8N3U1 123 aa12.74□□□□□ -0.37
CTSA-201ENST00000191018 LINC00269Q8N2A0 174 aa12.73□□□□□ -0.37
CTSA-201ENST00000191018 C11orf45Q8TAV5 145 aa12.73□□□□□ -0.37
CTSA-201ENST00000191018 CFC1BP0CG36 223 aa12.72□□□□□ -0.37
CTSA-201ENST00000191018 CFC1P0CG37 223 aa12.72□□□□□ -0.37
CTSA-201ENST00000191018 NANOS2P60321 138 aaKnown RBP12.72□□□□□ -0.37
CTSA-201ENST00000191018 RPL24P83731 157 aaKnown RBP12.72□□□□□ -0.37
CTSA-201ENST00000191018 MIAQ16674 131 aa12.72□□□□□ -0.37
CTSA-201ENST00000191018 A4D1N5 150 aa12.72□□□□□ -0.37
CTSA-201ENST00000191018 CLPSL2Q6UWE3 100 aa12.72□□□□□ -0.37
CTSA-201ENST00000191018 ANGP03950 147 aaKnown RBP12.71□□□□□ -0.37
CTSA-201ENST00000191018 C5orf38Q86SI9 138 aa12.71□□□□□ -0.37
CTSA-201ENST00000191018 COX7B2Q8TF08 81 aa12.71□□□□□ -0.37
CTSA-201ENST00000191018 APOMO95445 188 aa12.7□□□□□ -0.38
CTSA-201ENST00000191018 FABP2P12104 132 aa12.7□□□□□ -0.38
CTSA-201ENST00000191018 HERV-K104P63124 156 aa12.7□□□□□ -0.38
CTSA-201ENST00000191018 REG3AQ06141 175 aa12.7□□□□□ -0.38
CTSA-201ENST00000191018 XCL1P47992 114 aa12.7□□□□□ -0.38
CTSA-201ENST00000191018 DEFB121Q5J5C9 76 aa12.7□□□□□ -0.38
CTSA-201ENST00000191018 LINC01561Q8N1V8 128 aa12.7□□□□□ -0.38
CTSA-201ENST00000191018 DEFB131BA0A096LNP1 70 aa12.69□□□□□ -0.38
CTSA-201ENST00000191018 GAGE10A6NGK3 116 aa12.69□□□□□ -0.38
CTSA-201ENST00000191018 K7EP34 96 aa12.69□□□□□ -0.38
CTSA-201ENST00000191018 EIF4EBP3O60516 100 aaPredicted RBP12.68□□□□□ -0.38
CTSA-201ENST00000191018 CIRBPQ14011 172 aaKnown RBP12.68□□□□□ -0.38
CTSA-201ENST00000191018 GTF2H5Q6ZYL4 71 aa12.68□□□□□ -0.38
CTSA-201ENST00000191018 PGPEP1Q9NXJ5 209 aa12.68□□□□□ -0.38
CTSA-201ENST00000191018 PRSS2P07478 247 aa12.68□□□□□ -0.38
CTSA-201ENST00000191018 IFITM1P13164 125 aa12.68□□□□□ -0.38
CTSA-201ENST00000191018 CD164L2Q6UWJ8 174 aa12.68□□□□□ -0.38
CTSA-201ENST00000191018 A0A0B4J2C4 111 aa12.67□□□□□ -0.38
CTSA-201ENST00000191018 MRAPQ8TCY5 172 aa12.67□□□□□ -0.38
CTSA-201ENST00000191018 PRR34Q9NV39 138 aa12.67□□□□□ -0.38
CTSA-201ENST00000191018 SPCS1Q9Y6A9 102 aa12.67□□□□□ -0.38
CTSA-201ENST00000191018 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.66□□□□□ -0.38
CTSA-201ENST00000191018 TOMM7Q9P0U1 55 aa12.66□□□□□ -0.38
CTSA-201ENST00000191018 TSPAN13O95857 204 aa12.65□□□□□ -0.38
CTSA-201ENST00000191018 CHCHD10Q8WYQ3 142 aaPredicted RBP12.65□□□□□ -0.38
CTSA-201ENST00000191018 PRO1854Q9UHT4 67 aa12.65□□□□□ -0.38
CTSA-201ENST00000191018 MGAM2Q2M2H8 2515 aa12.65□□□□□ -0.38
CTSA-201ENST00000191018 DAND5Q8N907 189 aa12.65□□□□□ -0.38
CTSA-201ENST00000191018 MEIG1Q5JSS6 88 aa12.63□□□□□ -0.39
CTSA-201ENST00000191018 HUWE1Q7Z6Z7 4374 aaKnown RBP12.63□□□□□ -0.39
CTSA-201ENST00000191018 ESRGQ1W209 222 aa12.63□□□□□ -0.39
CTSA-201ENST00000191018 IGLV10-54A0A075B6I4 117 aa12.62□□□□□ -0.39
CTSA-201ENST00000191018 NPC2P61916 151 aa12.62□□□□□ -0.39
CTSA-201ENST00000191018 SFTA2Q6UW10 78 aa12.62□□□□□ -0.39
CTSA-201ENST00000191018 WFDC10BQ8IUB3 73 aa12.62□□□□□ -0.39
CTSA-201ENST00000191018 Q8IZM0 81 aa12.62□□□□□ -0.39
CTSA-201ENST00000191018 LINC00308Q8TCZ7 52 aa12.62□□□□□ -0.39
CTSA-201ENST00000191018 KLK12Q9UKR0 248 aa12.62□□□□□ -0.39
CTSA-201ENST00000191018 TRAV10A0A0B4J240 114 aa12.61□□□□□ -0.39
CTSA-201ENST00000191018 COX7A2LO14548 114 aa12.61□□□□□ -0.39
CTSA-201ENST00000191018 IGHV3-33P01772 117 aa12.61□□□□□ -0.39
CTSA-201ENST00000191018 FOXI1Q12951 378 aa12.61□□□□□ -0.39
CTSA-201ENST00000191018 ENHOQ6UWT2 76 aa12.61□□□□□ -0.39
CTSA-201ENST00000191018 PPDPFQ9H3Y8 114 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms