RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Olfr1537P34983 314 aa12.59□□□□□ -0.39
Trim39-203ENSMUST00000113706 Znf474Q6V5K9 347 aa12.59□□□□□ -0.39
Trim39-203ENSMUST00000113706 Insig2Q91WG1 225 aa12.59□□□□□ -0.39
Trim39-203ENSMUST00000113706 TcapO70548 167 aa12.59□□□□□ -0.39
Trim39-203ENSMUST00000113706 Btf3Q64152 204 aaKnown RBP12.59□□□□□ -0.39
Trim39-203ENSMUST00000113706 Etfrf1Q91V16 86 aa12.59□□□□□ -0.39
Trim39-203ENSMUST00000113706 Higd1bQ99JY6 98 aa12.59□□□□□ -0.39
Trim39-203ENSMUST00000113706 Opn3Q9WUK7 400 aa12.59□□□□□ -0.39
Trim39-203ENSMUST00000113706 Olfr872E9PVW2 323 aa12.58□□□□□ -0.39
Trim39-203ENSMUST00000113706 Zfp708F8VPP0 541 aa12.58□□□□□ -0.39
Trim39-203ENSMUST00000113706 Gm21060J3KMU4 56 aa12.58□□□□□ -0.39
Trim39-203ENSMUST00000113706 Gm27021M0QWE2 156 aa12.58□□□□□ -0.39
Trim39-203ENSMUST00000113706 Ren1P06281 402 aa12.58□□□□□ -0.39
Trim39-203ENSMUST00000113706 Rbfox2Q8BP71 449 aaKnown RBP12.58□□□□□ -0.39
Trim39-203ENSMUST00000113706 Trbv1A0A0B4J1G7 116 aa12.58□□□□□ -0.4
Trim39-203ENSMUST00000113706 Sdk1Q3UH53 2193 aa12.58□□□□□ -0.4
Trim39-203ENSMUST00000113706 Gm37388A0A0A6YY46 143 aa12.58□□□□□ -0.4
Trim39-203ENSMUST00000113706 Gng10Q9CXP8 68 aa12.58□□□□□ -0.4
Trim39-203ENSMUST00000113706 Q9D8L0 127 aa12.58□□□□□ -0.4
Trim39-203ENSMUST00000113706 Pla2g2dQ9WVF6 144 aa12.58□□□□□ -0.4
Trim39-203ENSMUST00000113706 Ighv6-3A0A075B5T2 118 aa12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 Ighv1-55A0A075B5W6 117 aa12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 Khdc1bP0C7A0 126 aa12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 GchfrP99025 84 aa12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 Cd200r3Q5UKY4 296 aa12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 Gm5468Q8C3D3 155 aa12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 Sptbn1Q62261 2363 aaKnown RBP12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 Trav4-4-dv10A0A075B651 110 aa12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 Ube2e1P52482 193 aa12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 Sumo1P63166 101 aaKnown RBP12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 Defb18Q30KP5 85 aa12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 Gm10334Q792Y8 246 aa12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 Fam168aQ8BGZ2 244 aa12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 Gm9945Q8BNZ3 91 aa12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 C130073F10RikQ8C4L8 201 aa12.57□□□□□ -0.4
Trim39-203ENSMUST00000113706 P03980 138 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Ube2l3P68037 154 aaKnown RBP12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Olfr1441Q8VFV3 318 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Olfr33Q8VGX7 318 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Rnase4Q9JJH1 148 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Cst10Q9JM84 148 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Abca12E9Q876 2595 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Ighv7-3A0A075B5R2 120 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Olfr1118A0A0J9YUE7 307 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Gm21913J3KML9 361 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Gm21776J3QPJ5 361 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Uqcrfs1Q9CR68 274 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Ighv1-69A0A0G2JFS5 117 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 PpoxP51175 477 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Zfp92Q62396 488 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Hoxc12Q8K5B8 280 aa12.56□□□□□ -0.4
Trim39-203ENSMUST00000113706 Trbv31A0A075B5J5 111 aa12.55□□□□□ -0.4
Trim39-203ENSMUST00000113706 NdpP48744 131 aa12.55□□□□□ -0.4
Trim39-203ENSMUST00000113706 Olfr403Q7TRX2 313 aa12.55□□□□□ -0.4
Trim39-203ENSMUST00000113706 Fam24aQ8CF27 98 aa12.55□□□□□ -0.4
Trim39-203ENSMUST00000113706 Olfr495Q8VF12 330 aa12.55□□□□□ -0.4
Trim39-203ENSMUST00000113706 Olfr1413Q8VGU3 323 aa12.55□□□□□ -0.4
Trim39-203ENSMUST00000113706 Ighv1-15A0A0A6YXA5 117 aa12.55□□□□□ -0.4
Trim39-203ENSMUST00000113706 Sox15P43267 231 aa12.55□□□□□ -0.4
Trim39-203ENSMUST00000113706 F7P70375 446 aa12.55□□□□□ -0.4
Trim39-203ENSMUST00000113706 Smim7Q5RKS2 75 aa12.55□□□□□ -0.4
Trim39-203ENSMUST00000113706 B430305J03RikQ8BQQ8 176 aa12.55□□□□□ -0.4
Trim39-203ENSMUST00000113706 Ascl2O35885 263 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 SelenotP62342 195 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Olfr127Q8VF25 323 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Igkv4-57A0A0A6YYE7 117 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 P04944 107 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 BsgP18572 389 aaKnown RBP12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Gm4763Q8CFJ5 196 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Mpv17lQ99MS3 194 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Rnf2Q9CQJ4 336 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 1700008P02RikQ9DAJ8 175 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Tmem183Q9JJB9 375 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Pfdn5Q9WU28 154 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Med13lQ6JPI3 2207 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Olfr748E9Q9Z0 307 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 P01792 123 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Tpt1P63028 172 aaKnown RBP12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Spink11Q09TK7 88 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Defb30Q30KN4 75 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Srsf1Q6PDM2 248 aaKnown RBP12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Olfr963Q7TRA9 311 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Olfr958Q8VEY3 312 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Olfr959Q9EQ86 311 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Ctnnbip1Q9JJN6 81 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Rab9aQ9R0M6 201 aa12.54□□□□□ -0.4
Trim39-203ENSMUST00000113706 Ighv9-4A0A0A6YWH6 117 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 Gm5741B2RVA4 72 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 Slc36a4Q8CH36 500 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 Olfr972Q9EQA2 314 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 Psg18B2RSG7 476 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 Gm37988J3QM41 62 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 Gm9733Q1AN91 178 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 BC100530Q497J0 97 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 Vwc2lQ505H4 222 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 Cd52Q64389 74 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 Olfr263Q7TQT8 317 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 Hif1anQ8BLR9 349 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 Scnm1Q8K136 229 aa12.53□□□□□ -0.4
Trim39-203ENSMUST00000113706 Acaa1aQ921H8 424 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 76.5 ms