RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 P01657 111 aa19.21■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Foxl1Q64731 336 aa19.21■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Ube2zQ3UE37 356 aa19.21■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Trav6d-4Q5R1I0 115 aa19.21■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Ndufa7Q9Z1P6 113 aaKnown RBP19.21■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Hbb-bsA8DUK4 147 aa19.2■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Efna4O08542 206 aa19.2■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 P01638 115 aa19.2■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Hbb-b1P02088 147 aa19.2■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Q9D8L0 127 aa19.2■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Trbv12-2A0A0B4J1H1 124 aa19.2■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Gm904Q3V2L5 102 aa19.2■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Dicer1Q8R418 1916 aa19.2■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Gm17334Q8C6U3 126 aa19.19■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 OtorQ9JIE3 128 aa19.19■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Fgf4P11403 202 aa19.19■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Tcl1b2P56841 117 aa19.19■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Cd5lQ9QWK4 352 aa19.19■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Timm10bQ9WV96 100 aa19.19■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 NynrinQ5DTZ0 1840 aa19.19■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Znf691Q3TDE8 283 aa19.19■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Q91WE4 72 aa19.19■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Dkk1O54908 272 aa19.18■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Defa16P50714 93 aa19.18■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Olfr1402Q8VET1 320 aa19.18■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 CklfQ9DAS1 152 aa19.18■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Zfp11P10751 647 aa19.18■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Rbfox3Q8BIF2 374 aa19.18■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Olfr984Q8VFN1 314 aa19.18■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Gm20219A0A1B0GRQ3 87 aa19.18■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Slc25a16Q8C0K5 332 aa19.18■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Tmem88bQ3TYP4 173 aa19.18■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Pate2Q3UW31 111 aa19.18■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Rnf125Q9D9R0 233 aa19.18■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Lhx2Q9Z0S2 406 aa19.18■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Tmem256Q5F285 113 aa19.17■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Mrps11Q9DCA2 191 aaKnown RBP19.17■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Zdhhc16Q9ESG8 361 aa19.17■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Chd3B1AR17 2055 aa19.17■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Lypd1Q8BLC3 141 aa19.17■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Gm10645Q3UPY1 145 aa19.17■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Col9a1Q05722 921 aa19.16■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Gng7Q61016 68 aa19.16■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Gtf3aQ8VHT7 364 aa19.16■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Trav8-1A0A075B641 109 aa19.16■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Zfp27P10077 819 aa19.16■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Cr2P19070 1025 aa19.16■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Cdk2ap2Q9CPY4 127 aa19.16■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Znf22Q9ERU3 237 aa19.15■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 VwceQ3U515 929 aa19.15■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 4930596D02RikQ3V0H9 216 aa19.15■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 TirapQ99JY1 241 aa19.15■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Pex7P97865 318 aa19.15■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Plekhb2Q9QZC7 221 aa19.15■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Tex54G3UW99 86 aa19.15■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Smr2O09133 150 aa19.15■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Cd59bP58019 129 aa19.15■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Gm4792Q569Q2 183 aa19.15■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Foxg1Q60987 481 aa19.15■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 SisF8VQM5 1818 aa19.15■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Tmem141A2AJB2 108 aa19.14■□□□□ 0.66
Sh3rf1-201ENSMUST00000034060 Gm29289A0A087WPY7 166 aa19.14■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Gm4064A0A087WR82 380 aa19.14■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Gm10352B2RWR6 380 aa19.14■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Gm21693J3QK27 380 aa19.14■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Gm27021M0QWE2 156 aa19.14■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Rbmy1a1O35698 380 aa19.14■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Igh-VJ558P01758 117 aa19.14■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Ralgapa2A3KGS3 1872 aa19.14■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Fndc7A2AED3 737 aa19.14■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 eef1akmt3D3YWP0 232 aa19.14■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Pax1P09084 446 aa19.14■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Spink6Q8BT20 105 aa19.14■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 SlpiP97430 131 aa19.14■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Wbp1P97764 304 aa19.13■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Hs3st3b1Q9QZS6 390 aa19.13■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Mcrip2Q9CQB2 160 aaKnown RBP19.13■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Zfp236S4R299 1847 aa19.13■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Repin1Q5U4E2 545 aa19.13■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Cdkn2aQ64364 169 aa19.13■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Cd300eQ8K249 196 aa19.13■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Zfp36l2P23949 484 aaKnown RBP19.12■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Hist1h1tQ07133 208 aa19.12■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Nit2Q9JHW2 276 aa19.12■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Cox7a2lQ61387 111 aa19.12■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 TtrP07309 147 aa19.12■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Gm26938S4R185 226 aa19.12■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Neurog3P70661 214 aa19.12■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Mllt11P97783 90 aa19.12■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Myo7aP97479 2215 aa19.11■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Mfap4Q9D1H9 257 aa19.11■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Tdgf1P51865 171 aa19.11■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Smad7O35253 426 aa19.11■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Gm10803Q3TZS6 135 aa19.11■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Higd1aQ9JLR9 95 aa19.11■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Gm19345G3UYD9 124 aa19.11■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Hbb-b2P02089 147 aa19.11■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Gm5089A1L3C8 106 aa19.11■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 1700067P10RikG3X8U2 183 aa19.11■□□□□ 0.65
Sh3rf1-201ENSMUST00000034060 Efna2P52801 209 aa19.11■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 213.5 ms