RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 DnlzQ9D113 177 aa9.07□□□□□ -0.96
Ciita-201ENSMUST00000023147 D430019H16RikJ3QPM6 83 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Tcl1b2P56841 117 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Loxl4Q924C6 757 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Tcrg-V6A0A075B5Y8 134 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Cd200r1Q9ES57 326 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Sumo3Q9Z172 110 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Olfr779E9PUS9 130 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Defa27F2Z403 93 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Cks1bP61025 79 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Gm5615Q3UW02 101 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 H2al1nQ497L1 109 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Zpld1Q8BGZ8 415 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Olfr1337A2ACY8 315 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 P01638 115 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Igh-VJ558P01758 117 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Saa3P04918 122 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 St6galnac2P70277 373 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Csrp1P97315 193 aaKnown RBP9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Gng7Q61016 68 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Olfr223Q8VF69 319 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Ormdl2Q9CQZ0 153 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Znf319Q9ERR8 581 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 LenepQ9WVB6 61 aa9.06□□□□□ -0.96
Ciita-201ENSMUST00000023147 Gm21983D6RFS9 131 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Olfr918E9PVZ7 325 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 PlnP61014 52 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Olfr139Q60891 315 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Vdac2Q60930 295 aaKnown RBP9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Tmem167aQ9CR64 72 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Trav6n-5A0A075B621 112 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Trav6-5A0A075B6B5 112 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Rnf166Q3U9F6 237 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Trdv4Q5R1A3 115 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Mrpl51Q9CPY1 128 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Ahctf1Q8CJF7 2243 aaKnown RBP9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Trbv1A0A0B4J1G7 116 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Igkv4-71A0A0G2JEH0 117 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Spint5J3KMK8 105 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Lrcol1Q3URS3 161 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Gm20854Q62461 227 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Znrf1Q91V17 227 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Tmem219Q9D123 240 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Ndufb8Q9D6J5 186 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Fer1l5P0DM40 2038 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Pglyrp3A1A547 347 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Gm21616B6ZB74 166 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Tmem86bQ497J1 226 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Srsf1Q6PDM2 248 aaKnown RBP9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Gpr82Q8BZR0 328 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Zdhhc16Q9ESG8 361 aa9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Cnot1Q6ZQ08 2375 aaKnown RBP9.05□□□□□ -0.96
Ciita-201ENSMUST00000023147 Trav3n-3A0A0G2JEM0 114 aa9.04□□□□□ -0.96
Ciita-201ENSMUST00000023147 Saxo2Q8BQB6 394 aa9.04□□□□□ -0.96
Ciita-201ENSMUST00000023147 GlmpQ9JHJ3 404 aa9.04□□□□□ -0.96
Ciita-201ENSMUST00000023147 Ighv1-22A0A075B5U7 117 aa9.04□□□□□ -0.96
Ciita-201ENSMUST00000023147 Mllt11P97783 90 aa9.04□□□□□ -0.96
Ciita-201ENSMUST00000023147 Prr23a3Q9CWP9 254 aa9.04□□□□□ -0.96
Ciita-201ENSMUST00000023147 Wisp3D3Z5L9 354 aa9.04□□□□□ -0.96
Ciita-201ENSMUST00000023147 Sec11aQ9R0P6 179 aa9.04□□□□□ -0.96
Ciita-201ENSMUST00000023147 Trav12d-1A0N8R0 115 aa9.04□□□□□ -0.96
Ciita-201ENSMUST00000023147 H2al2bA9Z055 111 aa9.04□□□□□ -0.96
Ciita-201ENSMUST00000023147 SeboxP70368 190 aa9.04□□□□□ -0.96
Ciita-201ENSMUST00000023147 Wbp1P97764 304 aa9.04□□□□□ -0.96
Ciita-201ENSMUST00000023147 Pradc1Q9D9N8 188 aa9.04□□□□□ -0.96
Ciita-201ENSMUST00000023147 Ighv5-9A0A075B5Q2 117 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Ighv1-76A0A0G2JFE9 117 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 A0A1Y7VMQ4 148 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Egr1P08046 533 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Klk1b22P15948 259 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Znf691Q3TDE8 283 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 H2-M10.4Q85ZW8 331 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Nat6Q9R123 314 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Zfp407G3UVV3 2246 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Klrd1O54707 179 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Ca2P00920 260 aaKnown RBP9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Susd3Q9D176 269 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 GgctQ9D7X8 188 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Plxnb3Q9QY40 1902 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 C2cd4dP0CG09 341 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Pilrb2Q2YFS1 225 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Tspan2Q922J6 221 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 HilpdaQ9JLS0 64 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Pmaip1Q9JM54 103 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Obsl1D3YYU8 1804 aaKnown RBP9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Ighv6-3A0A075B5T2 118 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Trav18A0A075B656 109 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Trav7-4A0A075B6C1 113 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 MsmbO08540 113 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Lcn2P11672 200 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Tmem136Q3TYE7 245 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Trav7d-4Q5R1H9 113 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Trav6d-4Q5R1I0 115 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Cd99Q8VCN6 175 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Prr15Q9D1T5 122 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Trav6-1A0A075B5Z8 112 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Gm21882J3QN86 361 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 HrkP62816 92 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 4930596D02RikQ3V0H9 216 aa9.03□□□□□ -0.96
Ciita-201ENSMUST00000023147 Cd200r1lQ6XJV6 249 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms