RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 ZNF415Q09FC8 603 aa10□□□□□ -0.81
PHGDH-233ENST00000642021 LINC01620Q4KN68 170 aa10□□□□□ -0.81
PHGDH-233ENST00000642021 NTN5Q8WTR8 489 aaPredicted RBP9.99□□□□□ -0.81
PHGDH-233ENST00000642021 NAV2Q8IVL1 2488 aa9.99□□□□□ -0.81
PHGDH-233ENST00000642021 TRBV30A0A0K0K1B3 111 aa9.99□□□□□ -0.81
PHGDH-233ENST00000642021 IGHV4-31P0DP07 118 aa9.99□□□□□ -0.81
PHGDH-233ENST00000642021 MEIG1Q5JSS6 88 aa9.99□□□□□ -0.81
PHGDH-233ENST00000642021 DAND5Q8N907 189 aa9.99□□□□□ -0.81
PHGDH-233ENST00000642021 SPANXA1Q9NS26 97 aa9.99□□□□□ -0.81
PHGDH-233ENST00000642021 CDKN2A-AS1Q9UH64 79 aa9.99□□□□□ -0.81
PHGDH-233ENST00000642021 IGHV3-53P01767 116 aa9.98□□□□□ -0.81
PHGDH-233ENST00000642021 ZNF462Q96JM2 2506 aa9.98□□□□□ -0.81
PHGDH-233ENST00000642021 EPG5Q9HCE0 2579 aa9.98□□□□□ -0.81
PHGDH-233ENST00000642021 ATXN8Q156A1 80 aa9.98□□□□□ -0.81
PHGDH-233ENST00000642021 SPANXDQ9BXN6 97 aa9.98□□□□□ -0.81
PHGDH-233ENST00000642021 SPANXCQ9NY87 97 aa9.98□□□□□ -0.81
PHGDH-233ENST00000642021 F8WDY8 70 aa9.97□□□□□ -0.81
PHGDH-233ENST00000642021 MIAQ16674 131 aa9.97□□□□□ -0.81
PHGDH-233ENST00000642021 KHDC1LQ5JSQ8 128 aa9.97□□□□□ -0.81
PHGDH-233ENST00000642021 NF1P21359 2839 aa9.97□□□□□ -0.81
PHGDH-233ENST00000642021 NIPBLQ6KC79 2804 aaeCLIP9.97□□□□□ -0.81
PHGDH-233ENST00000642021 TEX49A0A1B0GTD5 131 aa9.97□□□□□ -0.81
PHGDH-233ENST00000642021 KRTAP10-9P60411 292 aa9.97□□□□□ -0.81
PHGDH-233ENST00000642021 COX6A2Q02221 97 aa9.97□□□□□ -0.81
PHGDH-233ENST00000642021 PIK3CD-AS1Q5SR53 167 aa9.97□□□□□ -0.81
PHGDH-233ENST00000642021 C3orf56Q8N813 242 aa9.97□□□□□ -0.81
PHGDH-233ENST00000642021 LOC107984640A0A0U1RRK4 108 aa9.97□□□□□ -0.81
PHGDH-233ENST00000642021 DEFB114Q30KQ6 69 aa9.96□□□□□ -0.81
PHGDH-233ENST00000642021 BEAN1Q3B7T3 259 aa9.96□□□□□ -0.81
PHGDH-233ENST00000642021 DNAJC30Q96LL9 226 aa9.96□□□□□ -0.81
PHGDH-233ENST00000642021 XCL2Q9UBD3 114 aa9.96□□□□□ -0.81
PHGDH-233ENST00000642021 ICOSQ9Y6W8 199 aa9.96□□□□□ -0.81
PHGDH-233ENST00000642021 C2CD3Q4AC94 2353 aa9.96□□□□□ -0.82
PHGDH-233ENST00000642021 NOTCH3Q9UM47 2321 aa9.96□□□□□ -0.82
PHGDH-233ENST00000642021 F5H768 121 aa9.96□□□□□ -0.82
PHGDH-233ENST00000642021 TTC32Q5I0X7 151 aa9.95□□□□□ -0.82
PHGDH-233ENST00000642021 TMEM101Q96IK0 257 aa9.95□□□□□ -0.82
PHGDH-233ENST00000642021 PEMTQ9UBM1 199 aa9.95□□□□□ -0.82
PHGDH-233ENST00000642021 IGHV3OR16-12A0A075B7B8 117 aa9.95□□□□□ -0.82
PHGDH-233ENST00000642021 RS1O15537 224 aa9.95□□□□□ -0.82
PHGDH-233ENST00000642021 NDUFA7O95182 113 aa9.95□□□□□ -0.82
PHGDH-233ENST00000642021 PRB1P04280 392 aa9.95□□□□□ -0.82
PHGDH-233ENST00000642021 DYNLRB2Q8TF09 96 aa9.95□□□□□ -0.82
PHGDH-233ENST00000642021 TMEM126AQ9H061 195 aa9.95□□□□□ -0.82
PHGDH-233ENST00000642021 SONP18583 2426 aaKnown RBP9.95□□□□□ -0.82
PHGDH-233ENST00000642021 TRBV10-2A0A0K0K1G8 114 aa9.94□□□□□ -0.82
PHGDH-233ENST00000642021 LINC00694P0DN24 101 aa9.94□□□□□ -0.82
PHGDH-233ENST00000642021 Q8N2B8 174 aa9.94□□□□□ -0.82
PHGDH-233ENST00000642021 CLEC2BQ92478 149 aa9.94□□□□□ -0.82
PHGDH-233ENST00000642021 NBPF19A0A087WUL8 3843 aa9.94□□□□□ -0.82
PHGDH-233ENST00000642021 TMEM262E9PQX1 116 aa9.94□□□□□ -0.82
PHGDH-233ENST00000642021 WNK1Q9H4A3 2382 aa9.94□□□□□ -0.82
PHGDH-233ENST00000642021 H7C423 109 aa9.93□□□□□ -0.82
PHGDH-233ENST00000642021 INSP01308 110 aa9.93□□□□□ -0.82
PHGDH-233ENST00000642021 IFITM1P13164 125 aa9.93□□□□□ -0.82
PHGDH-233ENST00000642021 GAGE2BQ13066 116 aa9.93□□□□□ -0.82
PHGDH-233ENST00000642021 MRPL23Q16540 153 aaKnown RBP9.93□□□□□ -0.82
PHGDH-233ENST00000642021 GAGE2EQ4V326 116 aa9.93□□□□□ -0.82
PHGDH-233ENST00000642021 C4orf3Q8WVX3 66 aa9.93□□□□□ -0.82
PHGDH-233ENST00000642021 GAGE2DQ9UEU5 116 aa9.93□□□□□ -0.82
PHGDH-233ENST00000642021 CR1P17927 2039 aa9.93□□□□□ -0.82
PHGDH-233ENST00000642021 ODF3L2Q3SX64 289 aa9.93□□□□□ -0.82
PHGDH-233ENST00000642021 FAM19A5Q7Z5A7 132 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-233ENST00000642021 IGLV5-45A0A087WSX0 123 aa9.92□□□□□ -0.82
PHGDH-233ENST00000642021 C1orf158Q8N1D5 194 aa9.92□□□□□ -0.82
PHGDH-233ENST00000642021 ZNF625Q96I27 306 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-233ENST00000642021 LINC01600Q96MT4 127 aa9.92□□□□□ -0.82
PHGDH-233ENST00000642021 A0A0U1RRA0 63 aa9.92□□□□□ -0.82
PHGDH-233ENST00000642021 CRLF1O75462 422 aa9.92□□□□□ -0.82
PHGDH-233ENST00000642021 TIRAPP58753 221 aa9.92□□□□□ -0.82
PHGDH-233ENST00000642021 LINC00242Q5T6M2 205 aa9.92□□□□□ -0.82
PHGDH-233ENST00000642021 DGAT2L7PQ6IED9 249 aa9.92□□□□□ -0.82
PHGDH-233ENST00000642021 SETD2Q9BYW2 2564 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-233ENST00000642021 C11orf44Q8N8P7 122 aa9.91□□□□□ -0.82
PHGDH-233ENST00000642021 TRGV1A0A0A0MS02 117 aa9.91□□□□□ -0.82
PHGDH-233ENST00000642021 NDUFA1O15239 70 aa9.91□□□□□ -0.82
PHGDH-233ENST00000642021 RPL13AP40429 203 aaKnown RBP9.91□□□□□ -0.82
PHGDH-233ENST00000642021 C2orf82Q6UX34 121 aa9.91□□□□□ -0.82
PHGDH-233ENST00000642021 TRAV4A0A0B4J268 109 aa9.9□□□□□ -0.82
PHGDH-233ENST00000642021 NTM-AS1Q6ZSK4 140 aa9.9□□□□□ -0.82
PHGDH-233ENST00000642021 Q9H8V8 135 aa9.9□□□□□ -0.82
PHGDH-233ENST00000642021 JMJD1CQ15652 2540 aa9.89□□□□□ -0.83
PHGDH-233ENST00000642021 TIMM17BO60830 172 aa9.89□□□□□ -0.83
PHGDH-233ENST00000642021 IGLV5-39A0A0G2JS06 123 aa9.89□□□□□ -0.83
PHGDH-233ENST00000642021 COX6CP09669 75 aa9.89□□□□□ -0.83
PHGDH-233ENST00000642021 TRAV13-1A0A0B4J241 112 aa9.88□□□□□ -0.83
PHGDH-233ENST00000642021 LST1O00453 97 aa9.88□□□□□ -0.83
PHGDH-233ENST00000642021 Q6ZTI0 123 aa9.88□□□□□ -0.83
PHGDH-233ENST00000642021 UBE2WQ96B02 151 aa9.88□□□□□ -0.83
PHGDH-233ENST00000642021 LINC00308Q8TCZ7 52 aa9.88□□□□□ -0.83
PHGDH-233ENST00000642021 A0A1W2PRX2 142 aa9.87□□□□□ -0.83
PHGDH-233ENST00000642021 SOSTDC1Q6X4U4 206 aa9.87□□□□□ -0.83
PHGDH-233ENST00000642021 STHQ8IWL8 128 aa9.87□□□□□ -0.83
PHGDH-233ENST00000642021 IL17DQ8TAD2 202 aa9.87□□□□□ -0.83
PHGDH-233ENST00000642021 UBR5O95071 2799 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-233ENST00000642021 SMIM1B2RUZ4 78 aa9.87□□□□□ -0.83
PHGDH-233ENST00000642021 USP24Q9UPU5 2620 aa9.87□□□□□ -0.83
PHGDH-233ENST00000642021 TRAV8-4A0A0B4J246 113 aa9.86□□□□□ -0.83
PHGDH-233ENST00000642021 HERVK_113P63121 156 aa9.86□□□□□ -0.83
PHGDH-233ENST00000642021 Q96MF0 132 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms