RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 NTM-AS1Q6ZSK4 140 aa12.09□□□□□ -0.47
PHGDH-229ENST00000641891 RPL36ALQ969Q0 106 aaKnown RBP12.09□□□□□ -0.47
PHGDH-229ENST00000641891 TINCRA0A1B0GVN0 87 aa12.09□□□□□ -0.47
PHGDH-229ENST00000641891 A8MZ25 164 aa12.09□□□□□ -0.47
PHGDH-229ENST00000641891 RNF151Q2KHN1 245 aa12.09□□□□□ -0.47
PHGDH-229ENST00000641891 TRGV2A0A075B6R0 118 aa12.08□□□□□ -0.48
PHGDH-229ENST00000641891 SPINK8P0C7L1 97 aa12.08□□□□□ -0.48
PHGDH-229ENST00000641891 C1QTNF4Q9BXJ3 329 aa12.08□□□□□ -0.48
PHGDH-229ENST00000641891 TRBV10-1A0A0K0K1A3 114 aa12.08□□□□□ -0.48
PHGDH-229ENST00000641891 LOC100131303A0A0U1RQF7 123 aa12.08□□□□□ -0.48
PHGDH-229ENST00000641891 UBE2D3P61077 147 aa12.08□□□□□ -0.48
PHGDH-229ENST00000641891 UBE2D2P62837 147 aa12.08□□□□□ -0.48
PHGDH-229ENST00000641891 NOTCH3Q9UM47 2321 aa12.06□□□□□ -0.48
PHGDH-229ENST00000641891 DGAT2L7PQ6IED9 249 aa12.06□□□□□ -0.48
PHGDH-229ENST00000641891 SFTA2Q6UW10 78 aa12.06□□□□□ -0.48
PHGDH-229ENST00000641891 IGHV1-58A0A0C4DH39 117 aa12.06□□□□□ -0.48
PHGDH-229ENST00000641891 A0A0J9YXY3 114 aa12.06□□□□□ -0.48
PHGDH-229ENST00000641891 H3BMG7 143 aa12.06□□□□□ -0.48
PHGDH-229ENST00000641891 TSPAN13O95857 204 aa12.06□□□□□ -0.48
PHGDH-229ENST00000641891 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.06□□□□□ -0.48
PHGDH-229ENST00000641891 CFC1BP0CG36 223 aa12.05□□□□□ -0.48
PHGDH-229ENST00000641891 CFC1P0CG37 223 aa12.05□□□□□ -0.48
PHGDH-229ENST00000641891 DAZ4Q86SG3 579 aaKnown RBP12.05□□□□□ -0.48
PHGDH-229ENST00000641891 GEMIN7Q9H840 131 aaKnown RBP12.05□□□□□ -0.48
PHGDH-229ENST00000641891 DAZ3Q9NR90 486 aaKnown RBP12.05□□□□□ -0.48
PHGDH-229ENST00000641891 VSIG2Q96IQ7 327 aa12.05□□□□□ -0.48
PHGDH-229ENST00000641891 OVOL2Q9BRP0 275 aa12.05□□□□□ -0.48
PHGDH-229ENST00000641891 CDKN2A-AS1Q9UH64 79 aa12.05□□□□□ -0.48
PHGDH-229ENST00000641891 COX6A2Q02221 97 aa12.04□□□□□ -0.48
PHGDH-229ENST00000641891 SBSPONQ8IVN8 264 aa12.03□□□□□ -0.48
PHGDH-229ENST00000641891 MTURNQ8N3F0 131 aa12.03□□□□□ -0.48
PHGDH-229ENST00000641891 EIF4EBP3O60516 100 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-229ENST00000641891 A4D1N5 150 aa12.02□□□□□ -0.48
PHGDH-229ENST00000641891 MUSTN1Q8IVN3 82 aa12.02□□□□□ -0.48
PHGDH-229ENST00000641891 NDUFA12Q9UI09 145 aa12.02□□□□□ -0.48
PHGDH-229ENST00000641891 TRGV4A0A0C4DH28 118 aa12.02□□□□□ -0.49
PHGDH-229ENST00000641891 CRLF1O75462 422 aa12.02□□□□□ -0.49
PHGDH-229ENST00000641891 LITAFQ99732 161 aa12.02□□□□□ -0.49
PHGDH-229ENST00000641891 TMEM238C9JI98 176 aa12.01□□□□□ -0.49
PHGDH-229ENST00000641891 WFDC2Q14508 124 aa12.01□□□□□ -0.49
PHGDH-229ENST00000641891 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
PHGDH-229ENST00000641891 CBY1Q9Y3M2 126 aa12.01□□□□□ -0.49
PHGDH-229ENST00000641891 NOTCH2Q04721 2471 aa12□□□□□ -0.49
PHGDH-229ENST00000641891 IGLV5-45A0A087WSX0 123 aa12□□□□□ -0.49
PHGDH-229ENST00000641891 LOC107984156A0A0G2JMH3 177 aa12□□□□□ -0.49
PHGDH-229ENST00000641891 K7ERU9 68 aa12□□□□□ -0.49
PHGDH-229ENST00000641891 TIRAPP58753 221 aa12□□□□□ -0.49
PHGDH-229ENST00000641891 ARL17AQ8IVW1 177 aa12□□□□□ -0.49
PHGDH-229ENST00000641891 TRAV13-1A0A0B4J241 112 aa11.99□□□□□ -0.49
PHGDH-229ENST00000641891 TRBV6-4A0A1B0GX49 114 aa11.99□□□□□ -0.49
PHGDH-229ENST00000641891 FHL2Q14192 279 aa11.99□□□□□ -0.49
PHGDH-229ENST00000641891 ADAMTSL4-AS1Q5T5F5 129 aa11.99□□□□□ -0.49
PHGDH-229ENST00000641891 TMEM101Q96IK0 257 aa11.99□□□□□ -0.49
PHGDH-229ENST00000641891 DEFB130BP0DP73 79 aa11.98□□□□□ -0.49
PHGDH-229ENST00000641891 DEFB130AP0DP74 79 aa11.98□□□□□ -0.49
PHGDH-229ENST00000641891 TMEM243Q9BU79 118 aa11.98□□□□□ -0.49
PHGDH-229ENST00000641891 CSDC2Q9Y534 153 aaKnown RBP11.98□□□□□ -0.49
PHGDH-229ENST00000641891 ZFAND6Q6FIF0 208 aa11.98□□□□□ -0.49
PHGDH-229ENST00000641891 CDC42SE2Q9NRR3 84 aa11.98□□□□□ -0.49
PHGDH-229ENST00000641891 PRO1854Q9UHT4 67 aa11.98□□□□□ -0.49
PHGDH-229ENST00000641891 VWFP04275 2813 aa11.97□□□□□ -0.49
PHGDH-229ENST00000641891 RPL24P83731 157 aaKnown RBP11.97□□□□□ -0.49
PHGDH-229ENST00000641891 VPS25Q9BRG1 176 aa11.97□□□□□ -0.49
PHGDH-229ENST00000641891 GTSF1LQ9H1H1 148 aa11.97□□□□□ -0.49
PHGDH-229ENST00000641891 PRO0461Q9UI25 63 aa11.97□□□□□ -0.49
PHGDH-229ENST00000641891 FN1P02751 2386 aaKnown RBP11.97□□□□□ -0.49
PHGDH-229ENST00000641891 C2CD3Q4AC94 2353 aa11.97□□□□□ -0.49
PHGDH-229ENST00000641891 UBE2L6O14933 153 aa11.96□□□□□ -0.49
PHGDH-229ENST00000641891 PSMB2P49721 201 aa11.96□□□□□ -0.49
PHGDH-229ENST00000641891 TEX48A0A1B0GUV7 120 aa11.96□□□□□ -0.5
PHGDH-229ENST00000641891 F8W1H4 67 aa11.96□□□□□ -0.5
PHGDH-229ENST00000641891 NPC2P61916 151 aa11.96□□□□□ -0.5
PHGDH-229ENST00000641891 HERVK_113P63121 156 aa11.96□□□□□ -0.5
PHGDH-229ENST00000641891 X6R8D5 127 aa11.95□□□□□ -0.5
PHGDH-229ENST00000641891 NSD1Q96L73 2696 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-229ENST00000641891 G3V4G9 280 aa11.95□□□□□ -0.5
PHGDH-229ENST00000641891 H7C2G1 150 aa11.95□□□□□ -0.5
PHGDH-229ENST00000641891 PRSS2P07478 247 aa11.95□□□□□ -0.5
PHGDH-229ENST00000641891 C9orf66Q5T8R8 295 aa11.95□□□□□ -0.5
PHGDH-229ENST00000641891 SVIPQ8NHG7 77 aa11.95□□□□□ -0.5
PHGDH-229ENST00000641891 CIDEAO60543 219 aa11.94□□□□□ -0.5
PHGDH-229ENST00000641891 GAGE6Q13070 117 aa11.94□□□□□ -0.5
PHGDH-229ENST00000641891 SH2D6Q7Z4S9 175 aa11.94□□□□□ -0.5
PHGDH-229ENST00000641891 FAM19A3Q7Z5A8 133 aa11.94□□□□□ -0.5
PHGDH-229ENST00000641891 SPANXDQ9BXN6 97 aa11.94□□□□□ -0.5
PHGDH-229ENST00000641891 SPANXCQ9NY87 97 aa11.94□□□□□ -0.5
PHGDH-229ENST00000641891 A0A0B4J2C4 111 aa11.93□□□□□ -0.5
PHGDH-229ENST00000641891 IGLV5-39A0A0G2JS06 123 aa11.93□□□□□ -0.5
PHGDH-229ENST00000641891 SMIM1B2RUZ4 78 aa11.93□□□□□ -0.5
PHGDH-229ENST00000641891 IGHV3-33P01772 117 aa11.93□□□□□ -0.5
PHGDH-229ENST00000641891 DAND5Q8N907 189 aa11.93□□□□□ -0.5
PHGDH-229ENST00000641891 NDUFA1O15239 70 aa11.92□□□□□ -0.5
PHGDH-229ENST00000641891 INSL3P51460 131 aa11.92□□□□□ -0.5
PHGDH-229ENST00000641891 MIAQ16674 131 aa11.92□□□□□ -0.5
PHGDH-229ENST00000641891 TCL1BO95988 128 aa11.92□□□□□ -0.5
PHGDH-229ENST00000641891 ETDBQ3ZM63 59 aa11.92□□□□□ -0.5
PHGDH-229ENST00000641891 KIR2DL5BQ8NHK3 375 aa11.92□□□□□ -0.5
PHGDH-229ENST00000641891 TENM1Q9UKZ4 2725 aa11.92□□□□□ -0.5
PHGDH-229ENST00000641891 LINC00612Q8N6U2 182 aa11.91□□□□□ -0.5
PHGDH-229ENST00000641891 IGLV4-60A0A075B6I1 120 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms