RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 LYRM9A8MSI8 78 aa11.68□□□□□ -0.54
PHGDH-216ENST00000641375 PHLDA1Q8WV24 401 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-216ENST00000641375 PYGO1Q9Y3Y4 419 aa11.68□□□□□ -0.54
PHGDH-216ENST00000641375 PAPPA-AS1Q5QFB9 102 aa11.68□□□□□ -0.54
PHGDH-216ENST00000641375 ZC2HC1BQ5TFG8 222 aa11.68□□□□□ -0.54
PHGDH-216ENST00000641375 DEFB130BP0DP73 79 aa11.67□□□□□ -0.54
PHGDH-216ENST00000641375 DEFB130AP0DP74 79 aa11.67□□□□□ -0.54
PHGDH-216ENST00000641375 MIFP14174 115 aa11.67□□□□□ -0.54
PHGDH-216ENST00000641375 KRTAP10-11P60412 298 aa11.67□□□□□ -0.54
PHGDH-216ENST00000641375 HIGD1BQ9P298 99 aa11.67□□□□□ -0.54
PHGDH-216ENST00000641375 IGHV3-38A0A0C4DH36 116 aa11.67□□□□□ -0.54
PHGDH-216ENST00000641375 FHL2Q14192 279 aa11.67□□□□□ -0.54
PHGDH-216ENST00000641375 RNF183Q96D59 192 aa11.67□□□□□ -0.54
PHGDH-216ENST00000641375 CHCHD7Q9BUK0 85 aa11.67□□□□□ -0.54
PHGDH-216ENST00000641375 NBEAL2Q6ZNJ1 2754 aa11.66□□□□□ -0.54
PHGDH-216ENST00000641375 A8MZ25 164 aa11.66□□□□□ -0.54
PHGDH-216ENST00000641375 UBE2D3P61077 147 aa11.66□□□□□ -0.54
PHGDH-216ENST00000641375 UBE2D2P62837 147 aa11.66□□□□□ -0.54
PHGDH-216ENST00000641375 PRADC1Q9BSG0 188 aa11.66□□□□□ -0.54
PHGDH-216ENST00000641375 COL6A5A8TX70 2615 aa11.66□□□□□ -0.54
PHGDH-216ENST00000641375 GAGE12JA6NER3 117 aa11.65□□□□□ -0.54
PHGDH-216ENST00000641375 GAGE4Q13068 117 aa11.65□□□□□ -0.54
PHGDH-216ENST00000641375 GAGE5Q13069 117 aa11.65□□□□□ -0.54
PHGDH-216ENST00000641375 GAGE13Q4V321 117 aa11.65□□□□□ -0.54
PHGDH-216ENST00000641375 FAM222AQ5U5X8 452 aa11.65□□□□□ -0.54
PHGDH-216ENST00000641375 SPANXA1Q9NS26 97 aa11.65□□□□□ -0.54
PHGDH-216ENST00000641375 IGHV4-28A0A0C4DH34 117 aa11.64□□□□□ -0.55
PHGDH-216ENST00000641375 NMUP48645 174 aa11.64□□□□□ -0.55
PHGDH-216ENST00000641375 PKD1L1Q8TDX9 2849 aa11.64□□□□□ -0.55
PHGDH-216ENST00000641375 IGLV4-3A0A075B6K6 122 aa11.64□□□□□ -0.55
PHGDH-216ENST00000641375 E9PLD3 99 aa11.64□□□□□ -0.55
PHGDH-216ENST00000641375 WFDC2Q14508 124 aa11.64□□□□□ -0.55
PHGDH-216ENST00000641375 VCX2Q9H322 139 aa11.64□□□□□ -0.55
PHGDH-216ENST00000641375 TCTAP57738 103 aa11.63□□□□□ -0.55
PHGDH-216ENST00000641375 CMYA5Q8N3K9 4069 aa11.63□□□□□ -0.55
PHGDH-216ENST00000641375 Q8NAQ8 132 aa11.62□□□□□ -0.55
PHGDH-216ENST00000641375 PGPEP1Q9NXJ5 209 aa11.62□□□□□ -0.55
PHGDH-216ENST00000641375 UBE2D4Q9Y2X8 147 aa11.62□□□□□ -0.55
PHGDH-216ENST00000641375 IGLV4-69A0A075B6H9 119 aa11.62□□□□□ -0.55
PHGDH-216ENST00000641375 OPRPNQ99935 248 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-216ENST00000641375 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-216ENST00000641375 IGKV2-29A2NJV5 120 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-216ENST00000641375 FXYD2P54710 66 aa11.61□□□□□ -0.55
PHGDH-216ENST00000641375 GCSHP23434 173 aa11.6□□□□□ -0.55
PHGDH-216ENST00000641375 PCP2Q8IVA1 136 aa11.6□□□□□ -0.55
PHGDH-216ENST00000641375 AMELXQ99217 191 aa11.6□□□□□ -0.55
PHGDH-216ENST00000641375 TIMM21Q9BVV7 248 aa11.6□□□□□ -0.55
PHGDH-216ENST00000641375 TM2D2Q9BX73 214 aa11.6□□□□□ -0.55
PHGDH-216ENST00000641375 IGKV2D-26A0A0A0MRZ7 120 aa11.6□□□□□ -0.55
PHGDH-216ENST00000641375 LOC100131303A0A0U1RQF7 123 aa11.6□□□□□ -0.55
PHGDH-216ENST00000641375 DEFB4AO15263 64 aa11.6□□□□□ -0.55
PHGDH-216ENST00000641375 ETDBQ3ZM63 59 aa11.6□□□□□ -0.55
PHGDH-216ENST00000641375 PRO0255Q9UI72 69 aa11.6□□□□□ -0.55
PHGDH-216ENST00000641375 ERG28Q9UKR5 140 aa11.6□□□□□ -0.55
PHGDH-216ENST00000641375 C11orf86A6NJI1 115 aa11.59□□□□□ -0.55
PHGDH-216ENST00000641375 DAD1P61803 113 aa11.59□□□□□ -0.55
PHGDH-216ENST00000641375 NTM-AS1Q6ZSK4 140 aa11.59□□□□□ -0.55
PHGDH-216ENST00000641375 NFE4Q86UQ8 179 aa11.59□□□□□ -0.55
PHGDH-216ENST00000641375 ATP6V0E2Q8NHE4 81 aa11.59□□□□□ -0.55
PHGDH-216ENST00000641375 IGLL5B9A064 214 aa11.58□□□□□ -0.56
PHGDH-216ENST00000641375 SPART-AS1P0CW21 52 aa11.58□□□□□ -0.56
PHGDH-216ENST00000641375 CEMP1Q6PRD7 247 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-216ENST00000641375 SH2D6Q7Z4S9 175 aa11.58□□□□□ -0.56
PHGDH-216ENST00000641375 PRO0461Q9UI25 63 aa11.58□□□□□ -0.56
PHGDH-216ENST00000641375 LINC00694P0DN24 101 aa11.58□□□□□ -0.56
PHGDH-216ENST00000641375 MRPS36P82909 103 aaKnown RBP11.58□□□□□ -0.56
PHGDH-216ENST00000641375 DGAT2L7PQ6IED9 249 aa11.58□□□□□ -0.56
PHGDH-216ENST00000641375 FAM104AQ969W3 186 aa11.58□□□□□ -0.56
PHGDH-216ENST00000641375 HERVK_113P61574 105 aa11.57□□□□□ -0.56
PHGDH-216ENST00000641375 CHAC1Q9BUX1 264 aa11.57□□□□□ -0.56
PHGDH-216ENST00000641375 CSDC2Q9Y534 153 aaKnown RBP11.57□□□□□ -0.56
PHGDH-216ENST00000641375 TRBV25-1A0A075B6N4 114 aa11.57□□□□□ -0.56
PHGDH-216ENST00000641375 SPINK8P0C7L1 97 aa11.56□□□□□ -0.56
PHGDH-216ENST00000641375 CEND1Q8N111 149 aa11.56□□□□□ -0.56
PHGDH-216ENST00000641375 TMEM243Q9BU79 118 aa11.56□□□□□ -0.56
PHGDH-216ENST00000641375 H7C423 109 aa11.55□□□□□ -0.56
PHGDH-216ENST00000641375 TAL2Q16559 108 aa11.55□□□□□ -0.56
PHGDH-216ENST00000641375 TMEM170BQ5T4T1 132 aa11.55□□□□□ -0.56
PHGDH-216ENST00000641375 SBSPONQ8IVN8 264 aa11.55□□□□□ -0.56
PHGDH-216ENST00000641375 CDIP1Q9H305 208 aa11.55□□□□□ -0.56
PHGDH-216ENST00000641375 K7ERJ3 54 aa11.55□□□□□ -0.56
PHGDH-216ENST00000641375 UBE2L6O14933 153 aa11.55□□□□□ -0.56
PHGDH-216ENST00000641375 ATP5G1P05496 136 aa11.55□□□□□ -0.56
PHGDH-216ENST00000641375 GYPEP15421 78 aa11.55□□□□□ -0.56
PHGDH-216ENST00000641375 NHP2Q9NX24 153 aaKnown RBP11.55□□□□□ -0.56
PHGDH-216ENST00000641375 ANK2Q01484 3957 aa11.55□□□□□ -0.56
PHGDH-216ENST00000641375 H3BMG7 143 aa11.54□□□□□ -0.56
PHGDH-216ENST00000641375 Q6ZUT4 128 aa11.54□□□□□ -0.56
PHGDH-216ENST00000641375 CELA1Q9UNI1 258 aa11.54□□□□□ -0.56
PHGDH-216ENST00000641375 FOXI1Q12951 378 aa11.54□□□□□ -0.56
PHGDH-216ENST00000641375 TRBV6-8A0A0A6YYG3 113 aa11.53□□□□□ -0.56
PHGDH-216ENST00000641375 PAX4O43316 350 aa11.53□□□□□ -0.56
PHGDH-216ENST00000641375 GAGE6Q13070 117 aa11.53□□□□□ -0.56
PHGDH-216ENST00000641375 A0A0J9YXV3 536 aa11.52□□□□□ -0.56
PHGDH-216ENST00000641375 APOMO95445 188 aa11.52□□□□□ -0.56
PHGDH-216ENST00000641375 RNASE13Q5GAN3 156 aaKnown RBP11.52□□□□□ -0.56
PHGDH-216ENST00000641375 TTTY13Q9BZ97 58 aa11.52□□□□□ -0.56
PHGDH-216ENST00000641375 SS18L2Q9UHA2 77 aa11.52□□□□□ -0.57
PHGDH-216ENST00000641375 DNAH3Q8TD57 4116 aa11.52□□□□□ -0.57
PHGDH-216ENST00000641375 TINCRA0A1B0GVN0 87 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms