RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 NEXN-AS1Q8NBZ9 246 aa13.67□□□□□ -0.22
CACNA1A-247ENST00000637769 NCOR2Q9Y618 2525 aa13.66□□□□□ -0.22
CACNA1A-247ENST00000637769 ESM1Q9NQ30 184 aa13.66□□□□□ -0.22
CACNA1A-247ENST00000637769 LINC00322Q6ZN03 302 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-247ENST00000637769 LINC00308Q8TCZ7 52 aa13.66□□□□□ -0.22
CACNA1A-247ENST00000637769 PATE2Q6UY27 113 aa13.66□□□□□ -0.22
CACNA1A-247ENST00000637769 C1orf158Q8N1D5 194 aa13.66□□□□□ -0.22
CACNA1A-247ENST00000637769 A0A1B0GXF2 115 aa13.65□□□□□ -0.22
CACNA1A-247ENST00000637769 CDPF1Q6NVV7 123 aa13.65□□□□□ -0.22
CACNA1A-247ENST00000637769 Q6ZSR3 168 aa13.65□□□□□ -0.22
CACNA1A-247ENST00000637769 UBE2D3P61077 147 aa13.64□□□□□ -0.23
CACNA1A-247ENST00000637769 TMEM223A0PJW6 202 aa13.64□□□□□ -0.23
CACNA1A-247ENST00000637769 MT-ATP8P03928 68 aa13.64□□□□□ -0.23
CACNA1A-247ENST00000637769 MLST8Q9BVC4 326 aa13.64□□□□□ -0.23
CACNA1A-247ENST00000637769 RITA1Q96K30 269 aa13.63□□□□□ -0.23
CACNA1A-247ENST00000637769 IGLV1-47P01700 117 aa13.63□□□□□ -0.23
CACNA1A-247ENST00000637769 SIRPDQ9H106 197 aa13.63□□□□□ -0.23
CACNA1A-247ENST00000637769 COL4A6Q14031 1691 aa13.62□□□□□ -0.23
CACNA1A-247ENST00000637769 LINC00467Q9BRT7 94 aa13.62□□□□□ -0.23
CACNA1A-247ENST00000637769 PRYO14603 147 aa13.62□□□□□ -0.23
CACNA1A-247ENST00000637769 NUPR1O60356 82 aa13.62□□□□□ -0.23
CACNA1A-247ENST00000637769 TRBV6-8A0A0A6YYG3 113 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 PRAC2D3DTV9 90 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 TP73-AS1Q9UF72 201 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 ANKRD11Q6UB99 2663 aaPredicted RBP13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 COX7CP15954 63 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 TRIAP1O43715 76 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 PTH2Q96A98 100 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 PYGO1Q9Y3Y4 419 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 DEFB131BA0A096LNP1 70 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 IGF2RP11717 2491 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 TRBV6-4A0A1B0GX49 114 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 LYPD6Q86Y78 171 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 SPTBN4Q9H254 2564 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 LRCOL1A6NCL2 159 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 CCDC140Q96MF4 163 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 C3orf84H3BNL1 204 aa13.59□□□□□ -0.23
CACNA1A-247ENST00000637769 M0R378 163 aa13.59□□□□□ -0.23
CACNA1A-247ENST00000637769 SMIM26A0A096LP01 95 aa13.59□□□□□ -0.23
CACNA1A-247ENST00000637769 FBXL19-AS1Q494R0 122 aa13.59□□□□□ -0.23
CACNA1A-247ENST00000637769 TRBV6-5A0A0K0K1A5 114 aa13.58□□□□□ -0.23
CACNA1A-247ENST00000637769 C10orf25Q5T742 122 aa13.58□□□□□ -0.23
CACNA1A-247ENST00000637769 SYCNQ0VAF6 134 aa13.58□□□□□ -0.24
CACNA1A-247ENST00000637769 LRRC75A-AS1Q8N1F1 130 aa13.58□□□□□ -0.24
CACNA1A-247ENST00000637769 FSTL3O95633 263 aa13.58□□□□□ -0.24
CACNA1A-247ENST00000637769 CD164L2Q6UWJ8 174 aa13.58□□□□□ -0.24
CACNA1A-247ENST00000637769 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-247ENST00000637769 DEFB4AO15263 64 aa13.57□□□□□ -0.24
CACNA1A-247ENST00000637769 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-247ENST00000637769 DNAJC9-AS1A6NH13 148 aa13.56□□□□□ -0.24
CACNA1A-247ENST00000637769 PMAIP1Q13794 54 aa13.56□□□□□ -0.24
CACNA1A-247ENST00000637769 CDKN2A-AS1Q9UH64 79 aa13.56□□□□□ -0.24
CACNA1A-247ENST00000637769 IGLV4-3A0A075B6K6 122 aa13.56□□□□□ -0.24
CACNA1A-247ENST00000637769 TNFRSF13BO14836 293 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-247ENST00000637769 LINC00574Q9H8X3 128 aa13.55□□□□□ -0.24
CACNA1A-247ENST00000637769 Q6ZVQ6 151 aa13.55□□□□□ -0.24
CACNA1A-247ENST00000637769 TRBV27A0A0K0K1C4 114 aa13.55□□□□□ -0.24
CACNA1A-247ENST00000637769 IGF1P05019 195 aa13.55□□□□□ -0.24
CACNA1A-247ENST00000637769 UNQ9165/PRO28630Q6UXU0 137 aa13.55□□□□□ -0.24
CACNA1A-247ENST00000637769 TTTY13Q9BZ97 58 aa13.54□□□□□ -0.24
CACNA1A-247ENST00000637769 U3KQK5 164 aa13.54□□□□□ -0.24
CACNA1A-247ENST00000637769 LOC107984640A0A0U1RRK4 108 aa13.54□□□□□ -0.24
CACNA1A-247ENST00000637769 FAM19A5Q7Z5A7 132 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-247ENST00000637769 NRACQ8N912 160 aa13.54□□□□□ -0.24
CACNA1A-247ENST00000637769 LY6LH3BQJ8 138 aa13.53□□□□□ -0.24
CACNA1A-247ENST00000637769 TRAV7A0A075B6U4 112 aa13.53□□□□□ -0.24
CACNA1A-247ENST00000637769 C6orf99Q4VX62 202 aa13.53□□□□□ -0.24
CACNA1A-247ENST00000637769 CFAP126Q5VTH2 177 aa13.53□□□□□ -0.24
CACNA1A-247ENST00000637769 IGLV4-69A0A075B6H9 119 aa13.53□□□□□ -0.24
CACNA1A-247ENST00000637769 Q6ZTI0 123 aa13.52□□□□□ -0.24
CACNA1A-247ENST00000637769 LST1O00453 97 aa13.52□□□□□ -0.24
CACNA1A-247ENST00000637769 Q6Q795 121 aa13.52□□□□□ -0.25
CACNA1A-247ENST00000637769 A6NDX4 124 aa13.52□□□□□ -0.25
CACNA1A-247ENST00000637769 M0QY20 66 aa13.52□□□□□ -0.25
CACNA1A-247ENST00000637769 TRAV10A0A0B4J240 114 aa13.52□□□□□ -0.25
CACNA1A-247ENST00000637769 SNURFQ9Y675 71 aa13.52□□□□□ -0.25
CACNA1A-247ENST00000637769 POLQO75417 2590 aa13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 ZNF524Q96C55 264 aa13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 IGLV2-14P01704 120 aa13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 ZNF22P17026 224 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 GRNP28799 593 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 SCXQ7RTU7 201 aa13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 A0A096LNI7 61 aa13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 WFDC10AQ9H1F0 79 aa13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 ZFAND3Q9H8U3 227 aa13.5□□□□□ -0.25
CACNA1A-247ENST00000637769 USP9YO00507 2555 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-247ENST00000637769 K7EQG2 157 aa13.5□□□□□ -0.25
CACNA1A-247ENST00000637769 CEMP1Q6PRD7 247 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-247ENST00000637769 ZFP36P26651 326 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-247ENST00000637769 PRR4Q16378 134 aa13.49□□□□□ -0.25
CACNA1A-247ENST00000637769 MRGPRG-AS1Q2M3A8 158 aa13.49□□□□□ -0.25
CACNA1A-247ENST00000637769 Q8N7P7 452 aa13.49□□□□□ -0.25
CACNA1A-247ENST00000637769 COL4A4P53420 1690 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-247ENST00000637769 DEFB114Q30KQ6 69 aa13.48□□□□□ -0.25
CACNA1A-247ENST00000637769 Q6JHZ5 121 aa13.48□□□□□ -0.25
CACNA1A-247ENST00000637769 A0A0J9YWU9 116 aa13.47□□□□□ -0.25
CACNA1A-247ENST00000637769 SPINK6Q6UWN8 80 aa13.47□□□□□ -0.25
CACNA1A-247ENST00000637769 ODF3BA8MYP8 253 aa13.47□□□□□ -0.25
CACNA1A-247ENST00000637769 LELP1Q5T871 98 aa13.47□□□□□ -0.25
CACNA1A-247ENST00000637769 ZNF73O43830 326 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms