RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 CFC1P0CG37 223 aa13.54□□□□□ -0.24
CLN5-219ENST00000637537 TRBV6-5A0A0K0K1A5 114 aa13.53□□□□□ -0.24
CLN5-219ENST00000637537 RHODO00212 210 aa13.53□□□□□ -0.24
CLN5-219ENST00000637537 BEAN1Q3B7T3 259 aa13.53□□□□□ -0.24
CLN5-219ENST00000637537 C10orf126Q8N4M7 172 aa13.53□□□□□ -0.24
CLN5-219ENST00000637537 LINC00482Q8N8I6 264 aa13.53□□□□□ -0.24
CLN5-219ENST00000637537 B5MCH6 92 aa13.52□□□□□ -0.24
CLN5-219ENST00000637537 IGHV3-30P01768 117 aa13.52□□□□□ -0.24
CLN5-219ENST00000637537 IGHV3-30-5P0DP03 117 aa13.52□□□□□ -0.24
CLN5-219ENST00000637537 RPL32P62910 135 aaKnown RBP13.52□□□□□ -0.24
CLN5-219ENST00000637537 CRLF1O75462 422 aa13.52□□□□□ -0.25
CLN5-219ENST00000637537 NBEAL2Q6ZNJ1 2754 aa13.52□□□□□ -0.25
CLN5-219ENST00000637537 LINC00467Q9BRT7 94 aa13.51□□□□□ -0.25
CLN5-219ENST00000637537 TSHBP01222 138 aa13.5□□□□□ -0.25
CLN5-219ENST00000637537 IGLV4-69A0A075B6H9 119 aa13.49□□□□□ -0.25
CLN5-219ENST00000637537 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.49□□□□□ -0.25
CLN5-219ENST00000637537 SLC25A29Q8N8R3 303 aa13.49□□□□□ -0.25
CLN5-219ENST00000637537 PRO1854Q9UHT4 67 aa13.49□□□□□ -0.25
CLN5-219ENST00000637537 C11orf86A6NJI1 115 aa13.49□□□□□ -0.25
CLN5-219ENST00000637537 SLC25A20O43772 301 aa13.49□□□□□ -0.25
CLN5-219ENST00000637537 TRGV1A0A0A0MS02 117 aa13.48□□□□□ -0.25
CLN5-219ENST00000637537 NDUFV3P56181 108 aaKnown RBP13.48□□□□□ -0.25
CLN5-219ENST00000637537 SCGB1C2P0DMR2 95 aa13.48□□□□□ -0.25
CLN5-219ENST00000637537 HERVK_113P61574 105 aa13.48□□□□□ -0.25
CLN5-219ENST00000637537 PAPPA-AS1Q5QFB9 102 aa13.48□□□□□ -0.25
CLN5-219ENST00000637537 SPXQ9BT56 116 aa13.48□□□□□ -0.25
CLN5-219ENST00000637537 IGIPA6NJ69 53 aa13.47□□□□□ -0.25
CLN5-219ENST00000637537 EMP1P54849 157 aa13.47□□□□□ -0.25
CLN5-219ENST00000637537 GAGE2BQ13066 116 aa13.47□□□□□ -0.25
CLN5-219ENST00000637537 GAGE2EQ4V326 116 aa13.47□□□□□ -0.25
CLN5-219ENST00000637537 GAGE2DQ9UEU5 116 aa13.47□□□□□ -0.25
CLN5-219ENST00000637537 CMC4P56277 68 aaPredicted RBP13.47□□□□□ -0.25
CLN5-219ENST00000637537 OPRPNQ99935 248 aaPredicted RBP13.47□□□□□ -0.25
CLN5-219ENST00000637537 I3L3M4 83 aa13.46□□□□□ -0.25
CLN5-219ENST00000637537 Q6ZTI0 123 aa13.46□□□□□ -0.25
CLN5-219ENST00000637537 TSPEAR-AS2P59090 65 aa13.46□□□□□ -0.26
CLN5-219ENST00000637537 FAM110AQ9BQ89 295 aa13.46□□□□□ -0.26
CLN5-219ENST00000637537 CFAP161Q6P656 301 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 Q6Q795 121 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 TRAV4A0A0B4J268 109 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 GAGE12JA6NER3 117 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 C9JAW5 83 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 SNCGO76070 127 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 GAGE7O76087 117 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 IGHV3-53P01767 116 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 GAGE12FP0CL80 117 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 GAGE12GP0CL81 117 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 GAGE12IP0CL82 117 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 GAGE4Q13068 117 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 PIK3CD-AS1Q5SR53 167 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 AMELXQ99217 191 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 NOP10Q9NPE3 64 aaKnown RBP13.45□□□□□ -0.26
CLN5-219ENST00000637537 TNFRSF18Q9Y5U5 241 aa13.45□□□□□ -0.26
CLN5-219ENST00000637537 IL17DQ8TAD2 202 aa13.44□□□□□ -0.26
CLN5-219ENST00000637537 TMEM263Q8WUH6 116 aaKnown RBP13.44□□□□□ -0.26
CLN5-219ENST00000637537 LINC01600Q96MT4 127 aa13.44□□□□□ -0.26
CLN5-219ENST00000637537 IGHV3-38A0A0C4DH36 116 aa13.43□□□□□ -0.26
CLN5-219ENST00000637537 RS1O15537 224 aa13.43□□□□□ -0.26
CLN5-219ENST00000637537 CSNK1G2-AS1Q8NCQ2 148 aa13.43□□□□□ -0.26
CLN5-219ENST00000637537 CCDC179H3BU77 68 aa13.43□□□□□ -0.26
CLN5-219ENST00000637537 EIF4EBP3O60516 100 aaPredicted RBP13.43□□□□□ -0.26
CLN5-219ENST00000637537 IGHV3-33P01772 117 aa13.43□□□□□ -0.26
CLN5-219ENST00000637537 PMVKQ15126 192 aa13.42□□□□□ -0.26
CLN5-219ENST00000637537 EDA2RQ9HAV5 297 aa13.42□□□□□ -0.26
CLN5-219ENST00000637537 IFITM1P13164 125 aa13.42□□□□□ -0.26
CLN5-219ENST00000637537 C20orf203Q8NBC4 194 aa13.42□□□□□ -0.26
CLN5-219ENST00000637537 PLAC8L1A1L4L8 177 aa13.41□□□□□ -0.26
CLN5-219ENST00000637537 RHOHQ15669 191 aa13.41□□□□□ -0.26
CLN5-219ENST00000637537 TTC32Q5I0X7 151 aa13.4□□□□□ -0.26
CLN5-219ENST00000637537 TIMM17AQ99595 171 aa13.4□□□□□ -0.26
CLN5-219ENST00000637537 A4D1N5 150 aa13.4□□□□□ -0.26
CLN5-219ENST00000637537 CEMP1Q6PRD7 247 aaPredicted RBP13.4□□□□□ -0.26
CLN5-219ENST00000637537 NTN5Q8WTR8 489 aaPredicted RBP13.4□□□□□ -0.26
CLN5-219ENST00000637537 RPL13AP40429 203 aaKnown RBP13.39□□□□□ -0.27
CLN5-219ENST00000637537 A0A0B4J2C4 111 aa13.39□□□□□ -0.27
CLN5-219ENST00000637537 J3QQQ9 107 aa13.39□□□□□ -0.27
CLN5-219ENST00000637537 TMEM141Q96I45 108 aa13.39□□□□□ -0.27
CLN5-219ENST00000637537 ZNRF2Q8NHG8 242 aa13.38□□□□□ -0.27
CLN5-219ENST00000637537 TMEM170BQ5T4T1 132 aa13.37□□□□□ -0.27
CLN5-219ENST00000637537 SHISA2Q6UWI4 295 aa13.37□□□□□ -0.27
CLN5-219ENST00000637537 FBN1P35555 2871 aaKnown RBP13.37□□□□□ -0.27
CLN5-219ENST00000637537 LINC01620Q4KN68 170 aa13.37□□□□□ -0.27
CLN5-219ENST00000637537 C16orf74Q96GX8 76 aa13.37□□□□□ -0.27
CLN5-219ENST00000637537 ATXN8Q156A1 80 aa13.36□□□□□ -0.27
CLN5-219ENST00000637537 HERV-K104P63124 156 aa13.36□□□□□ -0.27
CLN5-219ENST00000637537 RNASE13Q5GAN3 156 aaKnown RBP13.36□□□□□ -0.27
CLN5-219ENST00000637537 C9orf66Q5T8R8 295 aa13.36□□□□□ -0.27
CLN5-219ENST00000637537 LGALS3P17931 250 aaKnown RBP13.35□□□□□ -0.27
CLN5-219ENST00000637537 SPANXA1Q9NS26 97 aa13.35□□□□□ -0.27
CLN5-219ENST00000637537 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.35□□□□□ -0.27
CLN5-219ENST00000637537 TRAV8-4A0A0B4J246 113 aa13.35□□□□□ -0.27
CLN5-219ENST00000637537 IGKV2-29A2NJV5 120 aaPredicted RBP13.35□□□□□ -0.27
CLN5-219ENST00000637537 DAZ2Q13117 558 aaKnown RBP13.35□□□□□ -0.27
CLN5-219ENST00000637537 IGLV4-3A0A075B6K6 122 aa13.34□□□□□ -0.27
CLN5-219ENST00000637537 TRGV2A0A075B6R0 118 aa13.34□□□□□ -0.27
CLN5-219ENST00000637537 CHCHD7Q9BUK0 85 aa13.34□□□□□ -0.27
CLN5-219ENST00000637537 TRBV10-2A0A0K0K1G8 114 aa13.34□□□□□ -0.27
CLN5-219ENST00000637537 TEX49A0A1B0GTD5 131 aa13.34□□□□□ -0.27
CLN5-219ENST00000637537 SMIM20Q8N5G0 67 aa13.34□□□□□ -0.27
CLN5-219ENST00000637537 C15orf53Q8NAA6 179 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms