RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-223ENST00000637293 F8VRH5 84 aa1.41□□□□□ -2.18
GABRB3-223ENST00000637293 M0R2N4 97 aa1.41□□□□□ -2.18
GABRB3-223ENST00000637293 UQCR11O14957 56 aa1.41□□□□□ -2.18
GABRB3-223ENST00000637293 LEPROTL1O95214 131 aa1.41□□□□□ -2.18
GABRB3-223ENST00000637293 IGKV2D-40P01614 121 aaPredicted RBP1.41□□□□□ -2.18
GABRB3-223ENST00000637293 ARMS2P0C7Q2 107 aa1.41□□□□□ -2.18
GABRB3-223ENST00000637293 KRTAP10-11P60412 298 aa1.41□□□□□ -2.18
GABRB3-223ENST00000637293 LCE4AQ5TA78 99 aa1.41□□□□□ -2.18
GABRB3-223ENST00000637293 IGFL1Q6UW32 110 aa1.41□□□□□ -2.18
GABRB3-223ENST00000637293 COA5Q86WW8 74 aa1.41□□□□□ -2.18
GABRB3-223ENST00000637293 MRC1P22897 1456 aa1.41□□□□□ -2.18
GABRB3-223ENST00000637293 ABCA9Q8IUA7 1624 aa1.4□□□□□ -2.18
GABRB3-223ENST00000637293 MADDQ8WXG6 1647 aa1.4□□□□□ -2.18
GABRB3-223ENST00000637293 CCDC180Q9P1Z9 1646 aa1.4□□□□□ -2.18
GABRB3-223ENST00000637293 BTAF1O14981 1849 aa1.4□□□□□ -2.18
GABRB3-223ENST00000637293 PI4KAP42356 2102 aa1.4□□□□□ -2.18
GABRB3-223ENST00000637293 PDCD11Q14690 1871 aaKnown RBP1.4□□□□□ -2.19
GABRB3-223ENST00000637293 KDM3BQ7LBC6 1761 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 CTTNBP2Q8WZ74 1663 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 RREB1Q92766 1687 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 LOC110117498A0A087WWA1 95 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 FAM223BA6NKX1 122 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 D6R8Y8 96 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 IGKV1-17P01599 117 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 IGLV3-19P01714 112 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 MGPP08493 103 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 SFTA3P0C7M3 94 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 CCL18P55774 89 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 Q6JHZ5 121 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 BAGE3Q86Y29 109 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 BAGE2Q86Y30 109 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 MUSTN1Q8IVN3 82 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 KRTAP9-3Q9BYQ3 159 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 PSENENQ9NZ42 101 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 ADAMTS9Q9P2N4 1935 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 LAMA4Q16363 1823 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 MED13Q9UHV7 2174 aa1.4□□□□□ -2.19
GABRB3-223ENST00000637293 DOCK11Q5JSL3 2073 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 NKTRP30414 1462 aaKnown RBP1.39□□□□□ -2.19
GABRB3-223ENST00000637293 IGKV3D-7A0A0C4DH55 119 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 IGKV3OR2-268A0A0C4DH90 116 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 FXYD1O00168 92 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 GAS8-AS1O95177 125 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 COX8AP10176 69 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 GCHFRP30047 84 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 KRTAP1-1Q07627 177 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 COX17Q14061 63 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 FXYD3Q14802 87 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 LCE1AQ5T7P2 110 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 ZNF563Q8TA94 476 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 PRR15LQ9BU68 103 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 LINC01558Q9Y6Z2 57 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 MED12Q93074 2177 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 GBF1Q92538 1859 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 ARFGEF2Q9Y6D5 1785 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 GPR179Q6PRD1 2367 aa1.39□□□□□ -2.19
GABRB3-223ENST00000637293 ADGRB2O60241 1585 aa1.38□□□□□ -2.19
GABRB3-223ENST00000637293 PLXNC1O60486 1568 aa1.38□□□□□ -2.19
GABRB3-223ENST00000637293 ARHGEF5Q12774 1597 aa1.38□□□□□ -2.19
GABRB3-223ENST00000637293 COL5A3P25940 1745 aaPredicted RBP1.38□□□□□ -2.19
GABRB3-223ENST00000637293 NBDYA0A0U1RRE5 68 aa1.38□□□□□ -2.19
GABRB3-223ENST00000637293 CTXND1A0A1B0GTU2 59 aa1.38□□□□□ -2.19
GABRB3-223ENST00000637293 IGKV2-29A2NJV5 120 aaPredicted RBP1.38□□□□□ -2.19
GABRB3-223ENST00000637293 M0R135 149 aa1.38□□□□□ -2.19
GABRB3-223ENST00000637293 IL9P15248 144 aa1.38□□□□□ -2.19
GABRB3-223ENST00000637293 IFI27P40305 119 aaPredicted RBP1.38□□□□□ -2.19
GABRB3-223ENST00000637293 HCP5Q6MZN7 132 aa1.38□□□□□ -2.19
GABRB3-223ENST00000637293 SMIM4Q8WVI0 70 aa1.38□□□□□ -2.19
GABRB3-223ENST00000637293 LINC00846Q9NV44 126 aa1.38□□□□□ -2.19
GABRB3-223ENST00000637293 ASXL1Q8IXJ9 1541 aa1.38□□□□□ -2.19
GABRB3-223ENST00000637293 CR1P17927 2039 aa1.38□□□□□ -2.19
GABRB3-223ENST00000637293 UNC13CQ8NB66 2214 aa1.38□□□□□ -2.19
GABRB3-223ENST00000637293 C1orf167Q5SNV9 1468 aa1.37□□□□□ -2.19
GABRB3-223ENST00000637293 ARFGEF3Q5TH69 2177 aa1.37□□□□□ -2.19
GABRB3-223ENST00000637293 LMTK2Q8IWU2 1503 aa1.37□□□□□ -2.19
GABRB3-223ENST00000637293 FXYD4P59646 89 aa1.37□□□□□ -2.19
GABRB3-223ENST00000637293 GDF5OSQ5U4N7 250 aa1.37□□□□□ -2.19
GABRB3-223ENST00000637293 C5orf56Q8N8D9 126 aa1.37□□□□□ -2.19
GABRB3-223ENST00000637293 LINC00304Q8N9R0 145 aa1.37□□□□□ -2.19
GABRB3-223ENST00000637293 ZNF625Q96I27 306 aaPredicted RBP1.37□□□□□ -2.19
GABRB3-223ENST00000637293 WFDC6Q9BQY6 131 aa1.37□□□□□ -2.19
GABRB3-223ENST00000637293 KRTAP1-5Q9BYS1 174 aa1.37□□□□□ -2.19
GABRB3-223ENST00000637293 ALPK2Q86TB3 2170 aa1.37□□□□□ -2.19
GABRB3-223ENST00000637293 LOC285556D6RIA3 1793 aa1.36□□□□□ -2.19
GABRB3-223ENST00000637293 RTTNQ86VV8 2226 aa1.36□□□□□ -2.19
GABRB3-223ENST00000637293 SCN7AQ01118 1682 aa1.36□□□□□ -2.19
GABRB3-223ENST00000637293 ARFGEF1Q9Y6D6 1849 aa1.36□□□□□ -2.19
GABRB3-223ENST00000637293 SHROOM3Q8TF72 1996 aa1.36□□□□□ -2.19
GABRB3-223ENST00000637293 SPTBP11277 2137 aa1.36□□□□□ -2.19
GABRB3-223ENST00000637293 ESPL1Q14674 2120 aa1.36□□□□□ -2.19
GABRB3-223ENST00000637293 TRGV2A0A075B6R0 118 aa1.36□□□□□ -2.19
GABRB3-223ENST00000637293 SPINT3P49223 89 aa1.36□□□□□ -2.19
GABRB3-223ENST00000637293 CAV3P56539 151 aa1.36□□□□□ -2.19
GABRB3-223ENST00000637293 ITSN1Q15811 1721 aa1.36□□□□□ -2.19
GABRB3-223ENST00000637293 Q6ZQY7 126 aa1.36□□□□□ -2.19
GABRB3-223ENST00000637293 UBE2D4Q9Y2X8 147 aa1.36□□□□□ -2.19
GABRB3-223ENST00000637293 SIPA1L3O60292 1781 aaPredicted RBP1.36□□□□□ -2.19
GABRB3-223ENST00000637293 COL5A1P20908 1838 aaPredicted RBP1.36□□□□□ -2.19
GABRB3-223ENST00000637293 PLCH1Q4KWH8 1693 aa1.35□□□□□ -2.19
GABRB3-223ENST00000637293 PRRC2BQ5JSZ5 2229 aaKnown RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms